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Data set of optimal parameters for colorimetric red assay of epoxide hydrolase activity.

Data in brief

de Oliveira GS, Adriani PP, Borges FG, Lopes AR, Campana PT, Chambergo FS.
PMID: 27366781
Data Brief. 2016 Jun 03;8:436-40. doi: 10.1016/j.dib.2016.05.075. eCollection 2016 Sep.

The data presented in this article are related to the research article entitled "Epoxide hydrolase of Trichoderma reesei: Biochemical properties and conformational characterization" [1]. Epoxide hydrolases (EHs) are enzymes that catalyze the hydrolysis of epoxides to the corresponding vicinal...

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de Oliveira GS, Adriani PP, Borges FG, et al. Data set of optimal parameters for colorimetric red assay of epoxide hydrolase activity. Data Brief. 2016;8:436-40doi: 10.1016/j.dib.2016.05.075.
de Oliveira, G. S., Adriani, P. P., Borges, F. G., Lopes, A. R., Campana, P. T., & Chambergo, F. S. (2016). Data set of optimal parameters for colorimetric red assay of epoxide hydrolase activity. Data in brief, 8436-40. https://doi.org/10.1016/j.dib.2016.05.075
de Oliveira, Gabriel Stephani, et al. "Data set of optimal parameters for colorimetric red assay of epoxide hydrolase activity." Data in brief vol. 8 (2016): 436-40. doi: https://doi.org/10.1016/j.dib.2016.05.075
de Oliveira GS, Adriani PP, Borges FG, Lopes AR, Campana PT, Chambergo FS. Data set of optimal parameters for colorimetric red assay of epoxide hydrolase activity. Data Brief. 2016 Jun 03;8:436-40. doi: 10.1016/j.dib.2016.05.075. eCollection 2016 Sep. PMID: 27366781; PMCID: PMC4910289.
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Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network.

Computational and structural biotechnology journal

Mitusińska K, Wojsa P, Bzówka M, Raczyńska A, Bagrowska W, Samol A, Kapica P, Góra A.
PMID: 35024092
Comput Struct Biotechnol J. 2021 Dec 13;20:193-205. doi: 10.1016/j.csbj.2021.10.042. eCollection 2022.

Enzymes with buried active sites maintain their catalytic function

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Mitusińska K, Wojsa P, Bzówka M, et al. Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network. Comput Struct Biotechnol J. 2021;20:193-205doi: 10.1016/j.csbj.2021.10.042.
Mitusińska, K., Wojsa, P., Bzówka, M., Raczyńska, A., Bagrowska, W., Samol, A., Kapica, P., & Góra, A. (2022). Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network. Computational and structural biotechnology journal, 20193-205. https://doi.org/10.1016/j.csbj.2021.10.042
Mitusińska, Karolina, et al. "Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network." Computational and structural biotechnology journal vol. 20 (2022): 193-205. doi: https://doi.org/10.1016/j.csbj.2021.10.042
Mitusińska K, Wojsa P, Bzówka M, Raczyńska A, Bagrowska W, Samol A, Kapica P, Góra A. Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network. Comput Struct Biotechnol J. 2021 Dec 13;20:193-205. doi: 10.1016/j.csbj.2021.10.042. eCollection 2022. PMID: 35024092; PMCID: PMC8715294.
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Proteasome Inhibitors and Their Pharmacokinetics, Pharmacodynamics, and Metabolism.

International journal of molecular sciences

Wang J, Fang Y, Fan RA, Kirk CJ.
PMID: 34769030
Int J Mol Sci. 2021 Oct 27;22(21). doi: 10.3390/ijms222111595.

The proteasome is responsible for mediating intracellular protein degradation and regulating cellular function with impact on tumor and immune effector cell biology. The proteasome is found predominantly in two forms, the constitutive proteasome and the immunoproteasome. It has been...

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Wang J, Fang Y, Fan RA, et al. Proteasome Inhibitors and Their Pharmacokinetics, Pharmacodynamics, and Metabolism. Int J Mol Sci. 2021;22(21)doi: 10.3390/ijms222111595.
Wang, J., Fang, Y., Fan, R. A., & Kirk, C. J. (2021). Proteasome Inhibitors and Their Pharmacokinetics, Pharmacodynamics, and Metabolism. International journal of molecular sciences, 22(21), . https://doi.org/10.3390/ijms222111595
Wang, Jinhai, et al. "Proteasome Inhibitors and Their Pharmacokinetics, Pharmacodynamics, and Metabolism." International journal of molecular sciences vol. 22,21 (2021). doi: https://doi.org/10.3390/ijms222111595
Wang J, Fang Y, Fan RA, Kirk CJ. Proteasome Inhibitors and Their Pharmacokinetics, Pharmacodynamics, and Metabolism. Int J Mol Sci. 2021 Oct 27;22(21). doi: 10.3390/ijms222111595. PMID: 34769030; PMCID: PMC8583966.
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Microbiological Transformations 43. Epoxide Hydrolases as Tools for the Synthesis of Enantiopure α-Methylstyrene Oxides:  A New and Efficient Synthesis of (.

The Journal of organic chemistry

Cleij M, Archelas A, Furstoss R.
PMID: 34237836
J Org Chem. 1999 Jul 09;64(14):5029-5035. doi: 10.1021/jo982101+.

Biohydrolysis of various α-methylstyrene oxide derivatives, differently substituted at the aromatic ring, was investigated using 10 epoxide hydrolases from different origins. Our results indicate that the enantioselectivity of these biohydrolyses strongly depends on the nature of the enzyme and...

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Cleij M, Archelas A, Furstoss R. Microbiological Transformations 43. Epoxide Hydrolases as Tools for the Synthesis of Enantiopure α-Methylstyrene Oxides:  A New and Efficient Synthesis of (. J Org Chem. 1999;64(14):5029-5035doi: 10.1021/jo982101+.
Cleij, M., Archelas, A., & Furstoss, R. (1999). Microbiological Transformations 43. Epoxide Hydrolases as Tools for the Synthesis of Enantiopure α-Methylstyrene Oxides:  A New and Efficient Synthesis of (. The Journal of organic chemistry, 64(14), 5029-5035. https://doi.org/10.1021/jo982101+
Cleij, M, et al. "Microbiological Transformations 43. Epoxide Hydrolases as Tools for the Synthesis of Enantiopure α-Methylstyrene Oxides:  A New and Efficient Synthesis of (." The Journal of organic chemistry vol. 64,14 (1999): 5029-5035. doi: https://doi.org/10.1021/jo982101+
Cleij M, Archelas A, Furstoss R. Microbiological Transformations 43. Epoxide Hydrolases as Tools for the Synthesis of Enantiopure α-Methylstyrene Oxides:  A New and Efficient Synthesis of (. J Org Chem. 1999 Jul 09;64(14):5029-5035. doi: 10.1021/jo982101+. PMID: 34237836.
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Enzyme-assisted bioremediation approach for synthetic dyes and polycyclic aromatic hydrocarbons degradation.

Journal of basic microbiology

Ahsan Z, Kalsoom U, Bhatti HN, Aftab K, Khalid N, Bilal M.
PMID: 34608659
J Basic Microbiol. 2021 Nov;61(11):960-981. doi: 10.1002/jobm.202100218. Epub 2021 Oct 04.

Environmental protection from emerging pollutants has become a significant challenge for mankind as an increasing number of contaminants, including synthetic dyes and polycyclic aromatic hydrocarbons (PAHs), represent a serious risk to ecological and environmental balance. Most synthetic dyes have...

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Ahsan Z, Kalsoom U, Bhatti HN, et al. Enzyme-assisted bioremediation approach for synthetic dyes and polycyclic aromatic hydrocarbons degradation. J Basic Microbiol. 2021;61(11):960-981doi: 10.1002/jobm.202100218.
Ahsan, Z., Kalsoom, U., Bhatti, H. N., Aftab, K., Khalid, N., & Bilal, M. (2021). Enzyme-assisted bioremediation approach for synthetic dyes and polycyclic aromatic hydrocarbons degradation. Journal of basic microbiology, 61(11), 960-981. https://doi.org/10.1002/jobm.202100218
Ahsan, Zainab, et al. "Enzyme-assisted bioremediation approach for synthetic dyes and polycyclic aromatic hydrocarbons degradation." Journal of basic microbiology vol. 61,11 (2021): 960-981. doi: https://doi.org/10.1002/jobm.202100218
Ahsan Z, Kalsoom U, Bhatti HN, Aftab K, Khalid N, Bilal M. Enzyme-assisted bioremediation approach for synthetic dyes and polycyclic aromatic hydrocarbons degradation. J Basic Microbiol. 2021 Nov;61(11):960-981. doi: 10.1002/jobm.202100218. Epub 2021 Oct 04. PMID: 34608659.
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Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network.

Computational and structural biotechnology journal

Mitusińska K, Wojsa P, Bzówka M, Raczyńska A, Bagrowska W, Samol A, Kapica P, Góra A.
PMID: 35024092
Comput Struct Biotechnol J. 2021 Dec 13;20:193-205. doi: 10.1016/j.csbj.2021.10.042. eCollection 2022.

Enzymes with buried active sites maintain their catalytic function

Cite
Mitusińska K, Wojsa P, Bzówka M, et al. Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network. Comput Struct Biotechnol J. 2021;20:193-205doi: 10.1016/j.csbj.2021.10.042.
Mitusińska, K., Wojsa, P., Bzówka, M., Raczyńska, A., Bagrowska, W., Samol, A., Kapica, P., & Góra, A. (2022). Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network. Computational and structural biotechnology journal, 20193-205. https://doi.org/10.1016/j.csbj.2021.10.042
Mitusińska, Karolina, et al. "Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network." Computational and structural biotechnology journal vol. 20 (2022): 193-205. doi: https://doi.org/10.1016/j.csbj.2021.10.042
Mitusińska K, Wojsa P, Bzówka M, Raczyńska A, Bagrowska W, Samol A, Kapica P, Góra A. Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network. Comput Struct Biotechnol J. 2021 Dec 13;20:193-205. doi: 10.1016/j.csbj.2021.10.042. eCollection 2022. PMID: 35024092; PMCID: PMC8715294.
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Oxidative stress-related genes (.

The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians

Zhao G, Liu J, Meng T.
PMID: 33586574
J Matern Fetal Neonatal Med. 2021 Feb 15;1-13. doi: 10.1080/14767058.2021.1887123. Epub 2021 Feb 15.

BACKGROUND: Previous studies have detected the association of polymorphisms in oxidative stress-related genes METHODS: Eligible studies were retrieved in PubMed, Web of Science, EMBASE, Scopus, and CNKI. Odds ratios (ORs) with 95% confidence intervals (CIs) were utilized to evaluate...

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Zhao G, Liu J, Meng T. Oxidative stress-related genes (. J Matern Fetal Neonatal Med. 2021;1-13doi: 10.1080/14767058.2021.1887123.
Zhao, G., Liu, J., & Meng, T. (2021). Oxidative stress-related genes (. The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians, 1-13. https://doi.org/10.1080/14767058.2021.1887123
Zhao, Ge, et al. "Oxidative stress-related genes (." The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians vol. (2021): 1-13. doi: https://doi.org/10.1080/14767058.2021.1887123
Zhao G, Liu J, Meng T. Oxidative stress-related genes (. J Matern Fetal Neonatal Med. 2021 Feb 15;1-13. doi: 10.1080/14767058.2021.1887123. Epub 2021 Feb 15. PMID: 33586574.
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Anti-tubercular activity of a natural stilbene and its synthetic derivatives.

GMS infectious diseases

Reinheimer C, Büttner D, Proschak E, Bode HB, Kempf VAJ, Wichelhaus TA.
PMID: 30671332
GMS Infect Dis. 2018 Feb 01;6:Doc01. doi: 10.3205/id000036. eCollection 2018.

No abstract available.

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Reinheimer C, Büttner D, Proschak E, et al. Anti-tubercular activity of a natural stilbene and its synthetic derivatives. GMS Infect Dis. 2018;6:Doc01doi: 10.3205/id000036.
Reinheimer, C., Büttner, D., Proschak, E., Bode, H. B., Kempf, V. A. J., & Wichelhaus, T. A. (2018). Anti-tubercular activity of a natural stilbene and its synthetic derivatives. GMS infectious diseases, 6Doc01. https://doi.org/10.3205/id000036
Reinheimer, Claudia, et al. "Anti-tubercular activity of a natural stilbene and its synthetic derivatives." GMS infectious diseases vol. 6 (2018): Doc01. doi: https://doi.org/10.3205/id000036
Reinheimer C, Büttner D, Proschak E, Bode HB, Kempf VAJ, Wichelhaus TA. Anti-tubercular activity of a natural stilbene and its synthetic derivatives. GMS Infect Dis. 2018 Feb 01;6:Doc01. doi: 10.3205/id000036. eCollection 2018. PMID: 30671332; PMCID: PMC6301740.
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Enzymology of Pyran Ring A Formation in Salinomycin Biosynthesis.

Angewandte Chemie (Weinheim an der Bergstrasse, Germany)

Luhavaya H, Dias MV, Williams SR, Hong H, de Oliveira LG, Leadlay PF.
PMID: 27587902
Angew Chem Weinheim Bergstr Ger. 2015 Nov 09;127(46):13826-13829. doi: 10.1002/ange.201507090. Epub 2015 Sep 17.

Tetrahydropyran rings are a common feature of complex polyketide natural products, but much remains to be learned about the enzymology of their formation. The enzyme SalBIII from the salinomycin biosynthetic pathway resembles other polyether epoxide hydrolases/cyclases of the MonB...

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Luhavaya H, Dias MV, Williams SR, et al. Enzymology of Pyran Ring A Formation in Salinomycin Biosynthesis. Angew Chem Weinheim Bergstr Ger. 2015;127(46):13826-13829doi: 10.1002/ange.201507090.
Luhavaya, H., Dias, M. V., Williams, S. R., Hong, H., de Oliveira, L. G., & Leadlay, P. F. (2015). Enzymology of Pyran Ring A Formation in Salinomycin Biosynthesis. Angewandte Chemie (Weinheim an der Bergstrasse, Germany), 127(46), 13826-13829. https://doi.org/10.1002/ange.201507090
Luhavaya, Hanna, et al. "Enzymology of Pyran Ring A Formation in Salinomycin Biosynthesis." Angewandte Chemie (Weinheim an der Bergstrasse, Germany) vol. 127,46 (2015): 13826-13829. doi: https://doi.org/10.1002/ange.201507090
Luhavaya H, Dias MV, Williams SR, Hong H, de Oliveira LG, Leadlay PF. Enzymology of Pyran Ring A Formation in Salinomycin Biosynthesis. Angew Chem Weinheim Bergstr Ger. 2015 Nov 09;127(46):13826-13829. doi: 10.1002/ange.201507090. Epub 2015 Sep 17. PMID: 27587902; PMCID: PMC4988243.
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High Regio- and Stereoselective Multi-enzymatic Synthesis of All Phenylpropanolamine Stereoisomers from β-Methylstyrene.

Chembiochem : a European journal of chemical biology

Corrado ML, Knaus T, Mutti FG.
PMID: 33880862
Chembiochem. 2021 Jul 01;22(13):2345-2350. doi: 10.1002/cbic.202100123. Epub 2021 May 13.

We present a one-pot cascade for the synthesis of phenylpropanolamines (PPAs) in high optical purities (er and dr up to >99.5 %) and analytical yields (up to 95 %) by using 1-phenylpropane-1,2-diols as key intermediates. This bioamination entails the...

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Corrado ML, Knaus T, Mutti FG. High Regio- and Stereoselective Multi-enzymatic Synthesis of All Phenylpropanolamine Stereoisomers from β-Methylstyrene. Chembiochem. 2021;22(13):2345-2350doi: 10.1002/cbic.202100123.
Corrado, M. L., Knaus, T., & Mutti, F. G. (2021). High Regio- and Stereoselective Multi-enzymatic Synthesis of All Phenylpropanolamine Stereoisomers from β-Methylstyrene. Chembiochem : a European journal of chemical biology, 22(13), 2345-2350. https://doi.org/10.1002/cbic.202100123
Corrado, Maria L, et al. "High Regio- and Stereoselective Multi-enzymatic Synthesis of All Phenylpropanolamine Stereoisomers from β-Methylstyrene." Chembiochem : a European journal of chemical biology vol. 22,13 (2021): 2345-2350. doi: https://doi.org/10.1002/cbic.202100123
Corrado ML, Knaus T, Mutti FG. High Regio- and Stereoselective Multi-enzymatic Synthesis of All Phenylpropanolamine Stereoisomers from β-Methylstyrene. Chembiochem. 2021 Jul 01;22(13):2345-2350. doi: 10.1002/cbic.202100123. Epub 2021 May 13. PMID: 33880862; PMCID: PMC8359840.
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GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans.

Hypertension (Dallas, Tex. : 1979)

Luther JM, Ray J, Wei D, Koethe JR, Hannah L, DeMatteo A, Manning R, Terker AS, Peng D, Nian H, Yu C, Mashayekhi M, Gamboa J, Brown NJ.
PMID: 34455816
Hypertension. 2021 Sep;78(4):1092-1102. doi: 10.1161/HYPERTENSIONAHA.121.17659. Epub 2021 Aug 30.

[Figure: see text].

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Luther JM, Ray J, Wei D, et al. GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans. Hypertension. 2021;78(4):1092-1102doi: 10.1161/HYPERTENSIONAHA.121.17659.
Luther, J. M., Ray, J., Wei, D., Koethe, J. R., Hannah, L., DeMatteo, A., Manning, R., Terker, A. S., Peng, D., Nian, H., Yu, C., Mashayekhi, M., Gamboa, J., & Brown, N. J. (2021). GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans. Hypertension (Dallas, Tex. : 1979), 78(4), 1092-1102. https://doi.org/10.1161/HYPERTENSIONAHA.121.17659
Luther, James M, et al. "GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans." Hypertension (Dallas, Tex. : 1979) vol. 78,4 (2021): 1092-1102. doi: https://doi.org/10.1161/HYPERTENSIONAHA.121.17659
Luther JM, Ray J, Wei D, Koethe JR, Hannah L, DeMatteo A, Manning R, Terker AS, Peng D, Nian H, Yu C, Mashayekhi M, Gamboa J, Brown NJ. GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans. Hypertension. 2021 Sep;78(4):1092-1102. doi: 10.1161/HYPERTENSIONAHA.121.17659. Epub 2021 Aug 30. PMID: 34455816; PMCID: PMC8429121.
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GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans.

Hypertension (Dallas, Tex. : 1979)

Luther JM, Ray J, Wei D, Koethe JR, Hannah L, DeMatteo A, Manning R, Terker AS, Peng D, Nian H, Yu C, Mashayekhi M, Gamboa J, Brown NJ.
PMID: 34455816
Hypertension. 2021 Sep;78(4):1092-1102. doi: 10.1161/HYPERTENSIONAHA.121.17659. Epub 2021 Aug 30.

[Figure: see text].

Cite
Luther JM, Ray J, Wei D, et al. GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans. Hypertension. 2021;78(4):1092-1102doi: 10.1161/HYPERTENSIONAHA.121.17659.
Luther, J. M., Ray, J., Wei, D., Koethe, J. R., Hannah, L., DeMatteo, A., Manning, R., Terker, A. S., Peng, D., Nian, H., Yu, C., Mashayekhi, M., Gamboa, J., & Brown, N. J. (2021). GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans. Hypertension (Dallas, Tex. : 1979), 78(4), 1092-1102. https://doi.org/10.1161/HYPERTENSIONAHA.121.17659
Luther, James M, et al. "GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans." Hypertension (Dallas, Tex. : 1979) vol. 78,4 (2021): 1092-1102. doi: https://doi.org/10.1161/HYPERTENSIONAHA.121.17659
Luther JM, Ray J, Wei D, Koethe JR, Hannah L, DeMatteo A, Manning R, Terker AS, Peng D, Nian H, Yu C, Mashayekhi M, Gamboa J, Brown NJ. GSK2256294 Decreases sEH (Soluble Epoxide Hydrolase) Activity in Plasma, Muscle, and Adipose and Reduces F2-Isoprostanes but Does Not Alter Insulin Sensitivity in Humans. Hypertension. 2021 Sep;78(4):1092-1102. doi: 10.1161/HYPERTENSIONAHA.121.17659. Epub 2021 Aug 30. PMID: 34455816; PMCID: PMC8429121.
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