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Draft Genome Sequences of .

Genome announcements

Klein BA, Lemon KP, Gajare P, Jospin G, Eisen JA, Coil DA.
PMID: 28232444
Genome Announc. 2017 Feb 23;5(8). doi: 10.1128/genomeA.01652-16.

We present here the draft genome sequences of

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Klein BA, Lemon KP, Gajare P, et al. Draft Genome Sequences of . Genome Announc. 2017;5(8)doi: 10.1128/genomeA.01652-16.
Klein, B. A., Lemon, K. P., Gajare, P., Jospin, G., Eisen, J. A., & Coil, D. A. (2017). Draft Genome Sequences of . Genome announcements, 5(8), . https://doi.org/10.1128/genomeA.01652-16
Klein, Brian A, et al. "Draft Genome Sequences of ." Genome announcements vol. 5,8 (2017). doi: https://doi.org/10.1128/genomeA.01652-16
Klein BA, Lemon KP, Gajare P, Jospin G, Eisen JA, Coil DA. Draft Genome Sequences of . Genome Announc. 2017 Feb 23;5(8). doi: 10.1128/genomeA.01652-16. PMID: 28232444; PMCID: PMC5323623.
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What Lives On Our Skin: Ecology, Genomics and Therapeutic Opportunities Of the Skin Microbiome.

Drug discovery today. Disease mechanisms

Scharschmidt TC, Fischbach MA.
PMID: 24273587
Drug Discov Today Dis Mech. 2013 Dec 01;10(3). doi: 10.1016/j.ddmec.2012.12.003.

Our skin is home to a rich community of microorganisms. Recent advances in sequencing technology have allowed more accurate enumeration of these human-associated microbiota and investigation of their genomic content.

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Scharschmidt TC, Fischbach MA. What Lives On Our Skin: Ecology, Genomics and Therapeutic Opportunities Of the Skin Microbiome. Drug Discov Today Dis Mech. 2013;10(3)doi: 10.1016/j.ddmec.2012.12.003.
Scharschmidt, T. C., & Fischbach, M. A. (2013). What Lives On Our Skin: Ecology, Genomics and Therapeutic Opportunities Of the Skin Microbiome. Drug discovery today. Disease mechanisms, 10(3), . https://doi.org/10.1016/j.ddmec.2012.12.003
Scharschmidt, Tiffany C, and Fischbach, Michael A. "What Lives On Our Skin: Ecology, Genomics and Therapeutic Opportunities Of the Skin Microbiome." Drug discovery today. Disease mechanisms vol. 10,3 (2013). doi: https://doi.org/10.1016/j.ddmec.2012.12.003
Scharschmidt TC, Fischbach MA. What Lives On Our Skin: Ecology, Genomics and Therapeutic Opportunities Of the Skin Microbiome. Drug Discov Today Dis Mech. 2013 Dec 01;10(3). doi: 10.1016/j.ddmec.2012.12.003. PMID: 24273587; PMCID: PMC3833721.
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New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract.

mSystems

Escapa IF, Chen T, Huang Y, Gajare P, Dewhirst FE, Lemon KP.
PMID: 30534599
mSystems. 2018 Dec 04;3(6). doi: 10.1128/mSystems.00187-18. eCollection 2018.

The expanded Human Oral Microbiome Database (eHOMD) is a comprehensive microbiome database for sites along the human aerodigestive tract that revealed new insights into the nostril microbiome. The eHOMD provides well-curated 16S rRNA gene reference sequences linked to available...

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Escapa IF, Chen T, Huang Y, et al. New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract. mSystems. 2018;3(6)doi: 10.1128/mSystems.00187-18.
Escapa, I. F., Chen, T., Huang, Y., Gajare, P., Dewhirst, F. E., & Lemon, K. P. (2018). New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract. mSystems, 3(6), . https://doi.org/10.1128/mSystems.00187-18
Escapa, Isabel F, et al. "New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract." mSystems vol. 3,6 (2018). doi: https://doi.org/10.1128/mSystems.00187-18
Escapa IF, Chen T, Huang Y, Gajare P, Dewhirst FE, Lemon KP. New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract. mSystems. 2018 Dec 04;3(6). doi: 10.1128/mSystems.00187-18. eCollection 2018. PMID: 30534599; PMCID: PMC6280432.
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Dyeing to learn more about the gut microbiota.

Cell host & microbe

Donia MS, Fischbach MA.
PMID: 23414750
Cell Host Microbe. 2013 Feb 13;13(2):119-20. doi: 10.1016/j.chom.2013.01.011.

The switch from culture-based enumeration to deep sequencing has enabled microbial community composition to be profiled en masse. In a new article, Maurice et al. (2013) report the use of fluorescence-activated cell sorting (FACS) to perform a high-throughput analysis...

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Donia MS, Fischbach MA. Dyeing to learn more about the gut microbiota. Cell Host Microbe. 2013;13(2):119-20doi: 10.1016/j.chom.2013.01.011.
Donia, M. S., & Fischbach, M. A. (2013). Dyeing to learn more about the gut microbiota. Cell host & microbe, 13(2), 119-20. https://doi.org/10.1016/j.chom.2013.01.011
Donia, Mohamed S, and Fischbach, Michael A. "Dyeing to learn more about the gut microbiota." Cell host & microbe vol. 13,2 (2013): 119-20. doi: https://doi.org/10.1016/j.chom.2013.01.011
Donia MS, Fischbach MA. Dyeing to learn more about the gut microbiota. Cell Host Microbe. 2013 Feb 13;13(2):119-20. doi: 10.1016/j.chom.2013.01.011. PMID: 23414750; PMCID: PMC3690940.
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Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria).

Genome announcements

Klein BA, Lemon KP, Faller LL, Jospin G, Eisen JA, Coil DA.
PMID: 27795241
Genome Announc. 2016 Oct 06;4(5). doi: 10.1128/genomeA.01040-16.

Here, we present the draft genome sequence of the actinobacterium Curtobacterium sp. strain UCD-KPL2560, which was isolated from the running surface of an indoor track field house in Medford, MA, USA (42.409716°N, -71.115169°W). The genome assembly contains 3,480,487 bp...

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Klein BA, Lemon KP, Faller LL, et al. Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria). Genome Announc. 2016;4(5)doi: 10.1128/genomeA.01040-16.
Klein, B. A., Lemon, K. P., Faller, L. L., Jospin, G., Eisen, J. A., & Coil, D. A. (2016). Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria). Genome announcements, 4(5), . https://doi.org/10.1128/genomeA.01040-16
Klein, Brian A, et al. "Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria)." Genome announcements vol. 4,5 (2016). doi: https://doi.org/10.1128/genomeA.01040-16
Klein BA, Lemon KP, Faller LL, Jospin G, Eisen JA, Coil DA. Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria). Genome Announc. 2016 Oct 06;4(5). doi: 10.1128/genomeA.01040-16. PMID: 27795241; PMCID: PMC5054313.
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Staphylococcus aureus Shifts toward Commensalism in Response to Corynebacterium Species.

Frontiers in microbiology

Ramsey MM, Freire MO, Gabrilska RA, Rumbaugh KP, Lemon KP.
PMID: 27582729
Front Microbiol. 2016 Aug 17;7:1230. doi: 10.3389/fmicb.2016.01230. eCollection 2016.

Staphylococcus aureus-human interactions result in a continuum of outcomes from commensalism to pathogenesis. S. aureus is a clinically important pathogen that asymptomatically colonizes ~25% of humans as a member of the nostril and skin microbiota, where it resides with...

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Ramsey MM, Freire MO, Gabrilska RA, et al. Staphylococcus aureus Shifts toward Commensalism in Response to Corynebacterium Species. Front Microbiol. 2016;7:1230doi: 10.3389/fmicb.2016.01230.
Ramsey, M. M., Freire, M. O., Gabrilska, R. A., Rumbaugh, K. P., & Lemon, K. P. (2016). Staphylococcus aureus Shifts toward Commensalism in Response to Corynebacterium Species. Frontiers in microbiology, 71230. https://doi.org/10.3389/fmicb.2016.01230
Ramsey, Matthew M, et al. "Staphylococcus aureus Shifts toward Commensalism in Response to Corynebacterium Species." Frontiers in microbiology vol. 7 (2016): 1230. doi: https://doi.org/10.3389/fmicb.2016.01230
Ramsey MM, Freire MO, Gabrilska RA, Rumbaugh KP, Lemon KP. Staphylococcus aureus Shifts toward Commensalism in Response to Corynebacterium Species. Front Microbiol. 2016 Aug 17;7:1230. doi: 10.3389/fmicb.2016.01230. eCollection 2016. PMID: 27582729; PMCID: PMC4988121.
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Showing 1 to 6 of 6 entries