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ParMap, an algorithm for the identification of small genomic insertions and deletions in nextgen sequencing data.

BMC research notes

Khiabanian H, Van Vlierberghe P, Palomero T, Ferrando AA, Rabadan R.
PMID: 20507604
BMC Res Notes. 2010 May 27;3:147. doi: 10.1186/1756-0500-3-147.

BACKGROUND: Next-generation sequencing produces high-throughput data, albeit with greater error and shorter reads than traditional Sanger sequencing methods. This complicates the detection of genomic variations, especially, small insertions and deletions.FINDINGS: Here we describe ParMap, a statistical algorithm for the...

Cite
Khiabanian H, Van Vlierberghe P, Palomero T, et al. ParMap, an algorithm for the identification of small genomic insertions and deletions in nextgen sequencing data. BMC Res Notes. 2010;3:147doi: 10.1186/1756-0500-3-147.
Khiabanian, H., Van Vlierberghe, P., Palomero, T., Ferrando, A. A., & Rabadan, R. (2010). ParMap, an algorithm for the identification of small genomic insertions and deletions in nextgen sequencing data. BMC research notes, 3147. https://doi.org/10.1186/1756-0500-3-147
Khiabanian, Hossein, et al. "ParMap, an algorithm for the identification of small genomic insertions and deletions in nextgen sequencing data." BMC research notes vol. 3 (2010): 147. doi: https://doi.org/10.1186/1756-0500-3-147
Khiabanian H, Van Vlierberghe P, Palomero T, Ferrando AA, Rabadan R. ParMap, an algorithm for the identification of small genomic insertions and deletions in nextgen sequencing data. BMC Res Notes. 2010 May 27;3:147. doi: 10.1186/1756-0500-3-147. PMID: 20507604; PMCID: PMC2897800.
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The NOTCH signaling pathway: role in the pathogenesis of T-cell acute lymphoblastic leukemia and implication for therapy.

Therapeutic advances in hematology

Tosello V, Ferrando AA.
PMID: 23730497
Ther Adv Hematol. 2013 Jun;4(3):199-210. doi: 10.1177/2040620712471368.

T-cell acute lymphoblastic leukemia/lymphoma (T-ALL) is characterized by aberrant activation of NOTCH1 in over 60% of T-ALL cases. The high prevalence of activating NOTCH1 mutations highlights the critical role of NOTCH signaling in the pathogenesis of this disease and...

Cite
Tosello V, Ferrando AA. The NOTCH signaling pathway: role in the pathogenesis of T-cell acute lymphoblastic leukemia and implication for therapy. Ther Adv Hematol. 2013;4(3):199-210doi: 10.1177/2040620712471368.
Tosello, V., & Ferrando, A. A. (2013). The NOTCH signaling pathway: role in the pathogenesis of T-cell acute lymphoblastic leukemia and implication for therapy. Therapeutic advances in hematology, 4(3), 199-210. https://doi.org/10.1177/2040620712471368
Tosello, Valeria, and Ferrando, Adolfo A. "The NOTCH signaling pathway: role in the pathogenesis of T-cell acute lymphoblastic leukemia and implication for therapy." Therapeutic advances in hematology vol. 4,3 (2013): 199-210. doi: https://doi.org/10.1177/2040620712471368
Tosello V, Ferrando AA. The NOTCH signaling pathway: role in the pathogenesis of T-cell acute lymphoblastic leukemia and implication for therapy. Ther Adv Hematol. 2013 Jun;4(3):199-210. doi: 10.1177/2040620712471368. PMID: 23730497; PMCID: PMC3666445.
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