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Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family.

Frontiers in plant science

Tanz SK, Castleden I, Hooper CM, Small I, Millar AH.
PMID: 25161662
Front Plant Sci. 2014 Aug 12;5:396. doi: 10.3389/fpls.2014.00396. eCollection 2014.

Sub-functionalization during the expansion of gene families in eukaryotes has occurred in part through specific subcellular localization of different family members. To better understand this process in plants, compiled records of large-scale proteomic and fluorescent protein localization datasets can...

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Tanz SK, Castleden I, Hooper CM, et al. Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family. Front Plant Sci. 2014;5:396doi: 10.3389/fpls.2014.00396.
Tanz, S. K., Castleden, I., Hooper, C. M., Small, I., & Millar, A. H. (2014). Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family. Frontiers in plant science, 5396. https://doi.org/10.3389/fpls.2014.00396
Tanz, Sandra K, et al. "Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family." Frontiers in plant science vol. 5 (2014): 396. doi: https://doi.org/10.3389/fpls.2014.00396
Tanz SK, Castleden I, Hooper CM, Small I, Millar AH. Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family. Front Plant Sci. 2014 Aug 12;5:396. doi: 10.3389/fpls.2014.00396. eCollection 2014. PMID: 25161662; PMCID: PMC4130198.
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The Rice TCM5 Gene Encoding a Novel Deg Protease Protein is Essential for Chloroplast Development under High Temperatures.

Rice (New York, N.Y.)

Zheng K, Zhao J, Lin D, Chen J, Xu J, Zhou H, Teng S, Dong Y.
PMID: 27000876
Rice (N Y). 2016 Dec;9(1):13. doi: 10.1186/s12284-016-0086-5. Epub 2016 Mar 21.

BACKGROUND: High temperature affects a broad spectrum of cellular components and metabolism in plants. The Deg/HtrA family of ATP-independent serine endopeptidases is present in nearly all organisms. Deg proteases are required for the survival of Escherichia coli at high...

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Zheng K, Zhao J, Lin D, et al. The Rice TCM5 Gene Encoding a Novel Deg Protease Protein is Essential for Chloroplast Development under High Temperatures. Rice (N Y). 2016;9(1):13doi: 10.1186/s12284-016-0086-5.
Zheng, K., Zhao, J., Lin, D., Chen, J., Xu, J., Zhou, H., Teng, S., & Dong, Y. (2016). The Rice TCM5 Gene Encoding a Novel Deg Protease Protein is Essential for Chloroplast Development under High Temperatures. Rice (New York, N.Y.), 9(1), 13. https://doi.org/10.1186/s12284-016-0086-5
Zheng, Kailun, et al. "The Rice TCM5 Gene Encoding a Novel Deg Protease Protein is Essential for Chloroplast Development under High Temperatures." Rice (New York, N.Y.) vol. 9,1 (2016): 13. doi: https://doi.org/10.1186/s12284-016-0086-5
Zheng K, Zhao J, Lin D, Chen J, Xu J, Zhou H, Teng S, Dong Y. The Rice TCM5 Gene Encoding a Novel Deg Protease Protein is Essential for Chloroplast Development under High Temperatures. Rice (N Y). 2016 Dec;9(1):13. doi: 10.1186/s12284-016-0086-5. Epub 2016 Mar 21. PMID: 27000876; PMCID: PMC4801845.
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Quantitative metaproteomics and activity-based protein profiling of patient fecal microbiome identifies host and microbial serine-type endopeptidase activity associated with ulcerative colitis.

Molecular & cellular proteomics : MCP

Thuy-Boun PS, Wang AY, Crissien-Martinez A, Xu JH, Chatterjee S, Stupp GS, Su AI, Coyle WJ, Wolan DW.
PMID: 35033677
Mol Cell Proteomics. 2022 Jan 13;100197. doi: 10.1016/j.mcpro.2022.100197. Epub 2022 Jan 13.

The gut microbiota plays an important yet incompletely understood role in the induction and propagation of ulcerative colitis (UC). Organism-level efforts to identify microbes associated with UC have revealed the importance of community structure, but less is known about...

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Thuy-Boun PS, Wang AY, Crissien-Martinez A, et al. Quantitative metaproteomics and activity-based protein profiling of patient fecal microbiome identifies host and microbial serine-type endopeptidase activity associated with ulcerative colitis. Mol Cell Proteomics. 2022;100197doi: 10.1016/j.mcpro.2022.100197.
Thuy-Boun, P. S., Wang, A. Y., Crissien-Martinez, A., Xu, J. H., Chatterjee, S., Stupp, G. S., Su, A. I., Coyle, W. J., & Wolan, D. W. (2022). Quantitative metaproteomics and activity-based protein profiling of patient fecal microbiome identifies host and microbial serine-type endopeptidase activity associated with ulcerative colitis. Molecular & cellular proteomics : MCP, 100197. https://doi.org/10.1016/j.mcpro.2022.100197
Thuy-Boun, Peter S, et al. "Quantitative metaproteomics and activity-based protein profiling of patient fecal microbiome identifies host and microbial serine-type endopeptidase activity associated with ulcerative colitis." Molecular & cellular proteomics : MCP vol. (2022): 100197. doi: https://doi.org/10.1016/j.mcpro.2022.100197
Thuy-Boun PS, Wang AY, Crissien-Martinez A, Xu JH, Chatterjee S, Stupp GS, Su AI, Coyle WJ, Wolan DW. Quantitative metaproteomics and activity-based protein profiling of patient fecal microbiome identifies host and microbial serine-type endopeptidase activity associated with ulcerative colitis. Mol Cell Proteomics. 2022 Jan 13;100197. doi: 10.1016/j.mcpro.2022.100197. Epub 2022 Jan 13. PMID: 35033677.
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Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression.

Journal of medicinal chemistry

Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW.
PMID: 34902246
J Med Chem. 2021 Dec 23;64(24):18158-18174. doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13.

Hepatocyte growth factor (HGF), the ligand for the MET receptor tyrosine kinase, is a tumor-promoting factor that is abundant in the tumor microenvironment. Proteolytic activation of inactive pro-HGF by one or more of the serine endopeptidases matriptase, hepsin, and...

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Damalanka VC, Voss JJLP, Mahoney MW, et al. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021;64(24):18158-18174doi: 10.1021/acs.jmedchem.1c01671.
Damalanka, V. C., Voss, J. J. L. P., Mahoney, M. W., Primeau, T., Li, S., Klampfer, L., & Janetka, J. W. (2021). Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. Journal of medicinal chemistry, 64(24), 18158-18174. https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka, Vishnu C, et al. "Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression." Journal of medicinal chemistry vol. 64,24 (2021): 18158-18174. doi: https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021 Dec 23;64(24):18158-18174. doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13. PMID: 34902246.
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A proteomic approach to identify digestive enzymes, their exocytic and microapocrine secretory routes and their compartmentalization in the midgut of Spodoptera frugiperda.

Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology

Fuzita FJ, Palmisano G, Pimenta DC, Terra WR, Ferreira C.
PMID: 34438074
Comp Biochem Physiol B Biochem Mol Biol. 2022 Jan;257:110670. doi: 10.1016/j.cbpb.2021.110670. Epub 2021 Aug 24.

A proteomic approach was used to identify the digestive enzymes secreted by exocytosis and by microapocrine vesicles and enzyme midgut compartmentalization in Spodoptera frugiperda larvae. For this, proteomic analyses were performed in isolated midgut enterocyte microvillar membrane, in a...

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Fuzita FJ, Palmisano G, Pimenta DC, et al. A proteomic approach to identify digestive enzymes, their exocytic and microapocrine secretory routes and their compartmentalization in the midgut of Spodoptera frugiperda. Comp Biochem Physiol B Biochem Mol Biol. 2021;257:110670doi: 10.1016/j.cbpb.2021.110670.
Fuzita, F. J., Palmisano, G., Pimenta, D. C., Terra, W. R., & Ferreira, C. (2022). A proteomic approach to identify digestive enzymes, their exocytic and microapocrine secretory routes and their compartmentalization in the midgut of Spodoptera frugiperda. Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology, 257110670. https://doi.org/10.1016/j.cbpb.2021.110670
Fuzita, Felipe J, et al. "A proteomic approach to identify digestive enzymes, their exocytic and microapocrine secretory routes and their compartmentalization in the midgut of Spodoptera frugiperda." Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology vol. 257 (2022): 110670. doi: https://doi.org/10.1016/j.cbpb.2021.110670
Fuzita FJ, Palmisano G, Pimenta DC, Terra WR, Ferreira C. A proteomic approach to identify digestive enzymes, their exocytic and microapocrine secretory routes and their compartmentalization in the midgut of Spodoptera frugiperda. Comp Biochem Physiol B Biochem Mol Biol. 2022 Jan;257:110670. doi: 10.1016/j.cbpb.2021.110670. Epub 2021 Aug 24. PMID: 34438074.
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Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression.

Journal of medicinal chemistry

Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW.
PMID: 34902246
J Med Chem. 2021 Dec 13; doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13.

Hepatocyte growth factor (HGF), the ligand for the MET receptor tyrosine kinase, is a tumor-promoting factor that is abundant in the tumor microenvironment. Proteolytic activation of inactive pro-HGF by one or more of the serine endopeptidases matriptase, hepsin, and...

Cite
Damalanka VC, Voss JJLP, Mahoney MW, et al. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021;doi: 10.1021/acs.jmedchem.1c01671.
Damalanka, V. C., Voss, J. J. L. P., Mahoney, M. W., Primeau, T., Li, S., Klampfer, L., & Janetka, J. W. (2021). Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. Journal of medicinal chemistry, . https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka, Vishnu C, et al. "Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression." Journal of medicinal chemistry vol. (2021). doi: https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021 Dec 13; doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13. PMID: 34902246.
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Genetic divergence between populations of feral and domestic forms of a mosquito disease vector assessed by transcriptomics.

PeerJ

Price DC, Fonseca DM.
PMID: 25755934
PeerJ. 2015 Feb 26;3:e807. doi: 10.7717/peerj.807. eCollection 2015.

Culex pipiens, an invasive mosquito and vector of West Nile virus in the US, has two morphologically indistinguishable forms that differ dramatically in behavior and physiology. Cx. pipiens form pipiens is primarily a bird-feeding temperate mosquito, while the sub-tropical...

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Price DC, Fonseca DM. Genetic divergence between populations of feral and domestic forms of a mosquito disease vector assessed by transcriptomics. PeerJ. 2015;3:e807doi: 10.7717/peerj.807.
Price, D. C., & Fonseca, D. M. (2015). Genetic divergence between populations of feral and domestic forms of a mosquito disease vector assessed by transcriptomics. PeerJ, 3e807. https://doi.org/10.7717/peerj.807
Price, Dana C, and Fonseca, Dina M. "Genetic divergence between populations of feral and domestic forms of a mosquito disease vector assessed by transcriptomics." PeerJ vol. 3 (2015): e807. doi: https://doi.org/10.7717/peerj.807
Price DC, Fonseca DM. Genetic divergence between populations of feral and domestic forms of a mosquito disease vector assessed by transcriptomics. PeerJ. 2015 Feb 26;3:e807. doi: 10.7717/peerj.807. eCollection 2015. PMID: 25755934; PMCID: PMC4349049.
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Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression.

Journal of medicinal chemistry

Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW.
PMID: 34902246
J Med Chem. 2021 Dec 23;64(24):18158-18174. doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13.

Hepatocyte growth factor (HGF), the ligand for the MET receptor tyrosine kinase, is a tumor-promoting factor that is abundant in the tumor microenvironment. Proteolytic activation of inactive pro-HGF by one or more of the serine endopeptidases matriptase, hepsin, and...

Cite
Damalanka VC, Voss JJLP, Mahoney MW, et al. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021;64(24):18158-18174doi: 10.1021/acs.jmedchem.1c01671.
Damalanka, V. C., Voss, J. J. L. P., Mahoney, M. W., Primeau, T., Li, S., Klampfer, L., & Janetka, J. W. (2021). Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. Journal of medicinal chemistry, 64(24), 18158-18174. https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka, Vishnu C, et al. "Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression." Journal of medicinal chemistry vol. 64,24 (2021): 18158-18174. doi: https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021 Dec 23;64(24):18158-18174. doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13. PMID: 34902246.
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Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression.

Journal of medicinal chemistry

Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW.
PMID: 34902246
J Med Chem. 2021 Dec 13; doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13.

Hepatocyte growth factor (HGF), the ligand for the MET receptor tyrosine kinase, is a tumor-promoting factor that is abundant in the tumor microenvironment. Proteolytic activation of inactive pro-HGF by one or more of the serine endopeptidases matriptase, hepsin, and...

Cite
Damalanka VC, Voss JJLP, Mahoney MW, et al. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021;doi: 10.1021/acs.jmedchem.1c01671.
Damalanka, V. C., Voss, J. J. L. P., Mahoney, M. W., Primeau, T., Li, S., Klampfer, L., & Janetka, J. W. (2021). Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. Journal of medicinal chemistry, . https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka, Vishnu C, et al. "Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression." Journal of medicinal chemistry vol. (2021). doi: https://doi.org/10.1021/acs.jmedchem.1c01671
Damalanka VC, Voss JJLP, Mahoney MW, Primeau T, Li S, Klampfer L, Janetka JW. Macrocyclic Inhibitors of HGF-Activating Serine Proteases Overcome Resistance to Receptor Tyrosine Kinase Inhibitors and Block Lung Cancer Progression. J Med Chem. 2021 Dec 13; doi: 10.1021/acs.jmedchem.1c01671. Epub 2021 Dec 13. PMID: 34902246.
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Showing 1 to 9 of 9 entries