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Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes.

Biotechnology for biofuels

Benz JP, Protzko RJ, Andrich JM, Bauer S, Dueber JE, Somerville CR.
PMID: 24502254
Biotechnol Biofuels. 2014 Feb 06;7(1):20. doi: 10.1186/1754-6834-7-20.

BACKGROUND: Pectin-rich agricultural wastes potentially represent favorable feedstocks for the sustainable production of alternative energy and bio-products. Their efficient utilization requires the conversion of all major constituent sugars. The current inability of the popular fermentation host Saccharomyces cerevisiae to...

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Benz JP, Protzko RJ, Andrich JM, et al. Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes. Biotechnol Biofuels. 2014;7(1):20doi: 10.1186/1754-6834-7-20.
Benz, J. P., Protzko, R. J., Andrich, J. M., Bauer, S., Dueber, J. E., & Somerville, C. R. (2014). Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes. Biotechnology for biofuels, 7(1), 20. https://doi.org/10.1186/1754-6834-7-20
Benz, J Philipp, et al. "Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes." Biotechnology for biofuels vol. 7,1 (2014): 20. doi: https://doi.org/10.1186/1754-6834-7-20
Benz JP, Protzko RJ, Andrich JM, Bauer S, Dueber JE, Somerville CR. Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes. Biotechnol Biofuels. 2014 Feb 06;7(1):20. doi: 10.1186/1754-6834-7-20. PMID: 24502254; PMCID: PMC3933009.
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Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater.

medRxiv : the preprint server for health sciences

Whitney ON, Kennedy LC, Fan V, Hinkle A, Kantor R, Greenwald H, Crits-Christoph A, Al-Shayeb B, Chaplin M, Maurer AC, Tjian R, Nelson KL.
PMID: 33300015
medRxiv. 2020 Dec 03; doi: 10.1101/2020.12.01.20242131.

No abstract available.

Cite
Whitney ON, Kennedy LC, Fan V, et al. Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv. 2020;doi: 10.1101/2020.12.01.20242131.
Whitney, O. N., Kennedy, L. C., Fan, V., Hinkle, A., Kantor, R., Greenwald, H., Crits-Christoph, A., Al-Shayeb, B., Chaplin, M., Maurer, A. C., Tjian, R., & Nelson, K. L. (2020). Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv : the preprint server for health sciences, . https://doi.org/10.1101/2020.12.01.20242131
Whitney, Oscar N, et al. "Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater." medRxiv : the preprint server for health sciences vol. (2020). doi: https://doi.org/10.1101/2020.12.01.20242131
Whitney ON, Kennedy LC, Fan V, Hinkle A, Kantor R, Greenwald H, Crits-Christoph A, Al-Shayeb B, Chaplin M, Maurer AC, Tjian R, Nelson KL. Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv. 2020 Dec 03; doi: 10.1101/2020.12.01.20242131. PMID: 33300015; PMCID: PMC7724686.
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Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen.

eLife

Deets KA, Nichols Doyle R, Rauch I, Vance RE.
PMID: 34939932
Elife. 2021 Dec 23;10. doi: 10.7554/eLife.72082.

The innate immune system detects pathogens and initiates adaptive immune responses. Inflammasomes are central components of the innate immune system, but whether inflammasomes provide sufficient signals to activate adaptive immunity is unclear. In intestinal epithelial cells (IECs), inflammasomes activate...

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Deets KA, Nichols Doyle R, Rauch I, et al. Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen. Elife. 2021;10doi: 10.7554/eLife.72082.
Deets, K. A., Nichols Doyle, R., Rauch, I., & Vance, R. E. (2021). Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen. eLife, 10. https://doi.org/10.7554/eLife.72082
Deets, Katherine A, et al. "Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen." eLife vol. 10 (2021). doi: https://doi.org/10.7554/eLife.72082
Deets KA, Nichols Doyle R, Rauch I, Vance RE. Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen. Elife. 2021 Dec 23;10. doi: 10.7554/eLife.72082. PMID: 34939932; PMCID: PMC8719880.
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Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater.

medRxiv : the preprint server for health sciences

Whitney ON, Kennedy LC, Fan V, Hinkle A, Kantor R, Greenwald H, Crits-Christoph A, Al-Shayeb B, Chaplin M, Maurer AC, Tjian R, Nelson KL.
PMID: 33300015
medRxiv. 2020 Dec 03; doi: 10.1101/2020.12.01.20242131.

No abstract available.

Cite
Whitney ON, Kennedy LC, Fan V, et al. Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv. 2020;doi: 10.1101/2020.12.01.20242131.
Whitney, O. N., Kennedy, L. C., Fan, V., Hinkle, A., Kantor, R., Greenwald, H., Crits-Christoph, A., Al-Shayeb, B., Chaplin, M., Maurer, A. C., Tjian, R., & Nelson, K. L. (2020). Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv : the preprint server for health sciences, . https://doi.org/10.1101/2020.12.01.20242131
Whitney, Oscar N, et al. "Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater." medRxiv : the preprint server for health sciences vol. (2020). doi: https://doi.org/10.1101/2020.12.01.20242131
Whitney ON, Kennedy LC, Fan V, Hinkle A, Kantor R, Greenwald H, Crits-Christoph A, Al-Shayeb B, Chaplin M, Maurer AC, Tjian R, Nelson KL. Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv. 2020 Dec 03; doi: 10.1101/2020.12.01.20242131. PMID: 33300015; PMCID: PMC7724686.
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Structural basis and regulation of the reductive stress response.

Cell

Manford AG, Mena EL, Shih KY, Gee CL, McMinimy R, Martínez-González B, Sherriff R, Lew B, Zoltek M, Rodríguez-Pérez F, Woldesenbet M, Kuriyan J, Rape M.
PMID: 34562363
Cell. 2021 Oct 14;184(21):5375-5390.e16. doi: 10.1016/j.cell.2021.09.002. Epub 2021 Sep 24.

Although oxidative phosphorylation is best known for producing ATP, it also yields reactive oxygen species (ROS) as invariant byproducts. Depletion of ROS below their physiological levels, a phenomenon known as reductive stress, impedes cellular signaling and has been linked...

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Manford AG, Mena EL, Shih KY, et al. Structural basis and regulation of the reductive stress response. Cell. 2021;184(21):5375-5390.e16doi: 10.1016/j.cell.2021.09.002.
Manford, A. G., Mena, E. L., Shih, K. Y., Gee, C. L., McMinimy, R., Martínez-González, B., Sherriff, R., Lew, B., Zoltek, M., Rodríguez-Pérez, F., Woldesenbet, M., Kuriyan, J., & Rape, M. (2021). Structural basis and regulation of the reductive stress response. Cell, 184(21), 5375-5390.e16. https://doi.org/10.1016/j.cell.2021.09.002
Manford, Andrew G, et al. "Structural basis and regulation of the reductive stress response." Cell vol. 184,21 (2021): 5375-5390.e16. doi: https://doi.org/10.1016/j.cell.2021.09.002
Manford AG, Mena EL, Shih KY, Gee CL, McMinimy R, Martínez-González B, Sherriff R, Lew B, Zoltek M, Rodríguez-Pérez F, Woldesenbet M, Kuriyan J, Rape M. Structural basis and regulation of the reductive stress response. Cell. 2021 Oct 14;184(21):5375-5390.e16. doi: 10.1016/j.cell.2021.09.002. Epub 2021 Sep 24. PMID: 34562363.
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Dynamic Control of Chromosome Topology and Gene Expression by a Chromatin Modification.

Cold Spring Harbor symposia on quantitative biology

Bian Q, Anderson EC, Brejc K, Meyer BJ.
PMID: 29472317
Cold Spring Harb Symp Quant Biol. 2017;82:279-291. doi: 10.1101/sqb.2017.82.034439. Epub 2018 Feb 22.

The function of chromatin modification in establishing higher-order chromosome structure during gene regulation has been elusive. We dissected the machinery and mechanism underlying the enrichment of histone modification H4K20me1 on hermaphrodite X chromosomes during

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Bian Q, Anderson EC, Brejc K, et al. Dynamic Control of Chromosome Topology and Gene Expression by a Chromatin Modification. Cold Spring Harb Symp Quant Biol. 2018;82:279-291doi: 10.1101/sqb.2017.82.034439.
Bian, Q., Anderson, E. C., Brejc, K., & Meyer, B. J. (2017). Dynamic Control of Chromosome Topology and Gene Expression by a Chromatin Modification. Cold Spring Harbor symposia on quantitative biology, 82279-291. https://doi.org/10.1101/sqb.2017.82.034439
Bian, Qian, et al. "Dynamic Control of Chromosome Topology and Gene Expression by a Chromatin Modification." Cold Spring Harbor symposia on quantitative biology vol. 82 (2017): 279-291. doi: https://doi.org/10.1101/sqb.2017.82.034439
Bian Q, Anderson EC, Brejc K, Meyer BJ. Dynamic Control of Chromosome Topology and Gene Expression by a Chromatin Modification. Cold Spring Harb Symp Quant Biol. 2017;82:279-291. doi: 10.1101/sqb.2017.82.034439. Epub 2018 Feb 22. PMID: 29472317; PMCID: PMC6041165.
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Current Approaches and Future Directions for the Treatment of mTORopathies.

Developmental neuroscience

Karalis V, Bateup HS.
PMID: 33910214
Dev Neurosci. 2021;43(3):143-158. doi: 10.1159/000515672. Epub 2021 Apr 28.

The mechanistic target of rapamycin (mTOR) is a kinase at the center of an evolutionarily conserved signaling pathway that orchestrates cell growth and metabolism. mTOR responds to an array of intra- and extracellular stimuli and in turn controls multiple...

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Karalis V, Bateup HS. Current Approaches and Future Directions for the Treatment of mTORopathies. Dev Neurosci. 2021;43(3):143-158doi: 10.1159/000515672.
Karalis, V., & Bateup, H. S. (2021). Current Approaches and Future Directions for the Treatment of mTORopathies. Developmental neuroscience, 43(3), 143-158. https://doi.org/10.1159/000515672
Karalis, Vasiliki, and Bateup, Helen S. "Current Approaches and Future Directions for the Treatment of mTORopathies." Developmental neuroscience vol. 43,3 (2021): 143-158. doi: https://doi.org/10.1159/000515672
Karalis V, Bateup HS. Current Approaches and Future Directions for the Treatment of mTORopathies. Dev Neurosci. 2021;43(3):143-158. doi: 10.1159/000515672. Epub 2021 Apr 28. PMID: 33910214; PMCID: PMC8440338.
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Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater.

medRxiv : the preprint server for health sciences

Whitney ON, Kennedy LC, Fan V, Hinkle A, Kantor R, Greenwald H, Crits-Christoph A, Al-Shayeb B, Chaplin M, Maurer AC, Tjian R, Nelson KL.
PMID: 33300015
medRxiv. 2020 Dec 03; doi: 10.1101/2020.12.01.20242131.

No abstract available.

Cite
Whitney ON, Kennedy LC, Fan V, et al. Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv. 2020;doi: 10.1101/2020.12.01.20242131.
Whitney, O. N., Kennedy, L. C., Fan, V., Hinkle, A., Kantor, R., Greenwald, H., Crits-Christoph, A., Al-Shayeb, B., Chaplin, M., Maurer, A. C., Tjian, R., & Nelson, K. L. (2020). Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv : the preprint server for health sciences, . https://doi.org/10.1101/2020.12.01.20242131
Whitney, Oscar N, et al. "Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater." medRxiv : the preprint server for health sciences vol. (2020). doi: https://doi.org/10.1101/2020.12.01.20242131
Whitney ON, Kennedy LC, Fan V, Hinkle A, Kantor R, Greenwald H, Crits-Christoph A, Al-Shayeb B, Chaplin M, Maurer AC, Tjian R, Nelson KL. Sewage, Salt, Silica and SARS-CoV-2 (4S): An economical kit-free method for direct capture of SARS-CoV-2 RNA from wastewater. medRxiv. 2020 Dec 03; doi: 10.1101/2020.12.01.20242131. PMID: 33300015; PMCID: PMC7724686.
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Programmed cortical ER collapse drives selective ER degradation and inheritance in yeast meiosis.

The Journal of cell biology

Otto GM, Cheunkarndee T, Leslie JM, Brar GA.
PMID: 34661602
J Cell Biol. 2021 Dec 06;220(12). doi: 10.1083/jcb.202108105. Epub 2021 Oct 18.

The endoplasmic reticulum (ER) carries out essential and conserved cellular functions, which depend on the maintenance of its structure and subcellular distribution. Here, we report developmentally regulated changes in ER morphology and composition during budding yeast meiosis, a conserved...

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Otto GM, Cheunkarndee T, Leslie JM, et al. Programmed cortical ER collapse drives selective ER degradation and inheritance in yeast meiosis. J Cell Biol. 2021;220(12)doi: 10.1083/jcb.202108105.
Otto, G. M., Cheunkarndee, T., Leslie, J. M., & Brar, G. A. (2021). Programmed cortical ER collapse drives selective ER degradation and inheritance in yeast meiosis. The Journal of cell biology, 220(12), . https://doi.org/10.1083/jcb.202108105
Otto, George Maxwell, et al. "Programmed cortical ER collapse drives selective ER degradation and inheritance in yeast meiosis." The Journal of cell biology vol. 220,12 (2021). doi: https://doi.org/10.1083/jcb.202108105
Otto GM, Cheunkarndee T, Leslie JM, Brar GA. Programmed cortical ER collapse drives selective ER degradation and inheritance in yeast meiosis. J Cell Biol. 2021 Dec 06;220(12). doi: 10.1083/jcb.202108105. Epub 2021 Oct 18. PMID: 34661602; PMCID: PMC8562846.
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[No title available]

Frontiers in physiology

Gibeaux R, Miller K, Acker R, Kwon T, Heald R.
PMID: 30564147
Front Physiol. 2018 Dec 04;9:1758. doi: 10.3389/fphys.2018.01758. eCollection 2018.

Determining how size is controlled is a fundamental question in biology that is poorly understood at the organismal, cellular, and subcellular levels. The

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Gibeaux R, Miller K, Acker R, et al. . Front Physiol. 2018;9:1758doi: 10.3389/fphys.2018.01758.
Gibeaux, R., Miller, K., Acker, R., Kwon, T., & Heald, R. (2018). . Frontiers in physiology, 91758. https://doi.org/10.3389/fphys.2018.01758
Gibeaux, Romain, et al. "." Frontiers in physiology vol. 9 (2018): 1758. doi: https://doi.org/10.3389/fphys.2018.01758
Gibeaux R, Miller K, Acker R, Kwon T, Heald R. . Front Physiol. 2018 Dec 04;9:1758. doi: 10.3389/fphys.2018.01758. eCollection 2018. PMID: 30564147; PMCID: PMC6288844.
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Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen.

eLife

Deets KA, Nichols Doyle R, Rauch I, Vance RE.
PMID: 34939932
Elife. 2021 Dec 23;10. doi: 10.7554/eLife.72082.

The innate immune system detects pathogens and initiates adaptive immune responses. Inflammasomes are central components of the innate immune system, but whether inflammasomes provide sufficient signals to activate adaptive immunity is unclear. In intestinal epithelial cells (IECs), inflammasomes activate...

Cite
Deets KA, Nichols Doyle R, Rauch I, et al. Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen. Elife. 2021;10doi: 10.7554/eLife.72082.
Deets, K. A., Nichols Doyle, R., Rauch, I., & Vance, R. E. (2021). Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen. eLife, 10. https://doi.org/10.7554/eLife.72082
Deets, Katherine A, et al. "Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen." eLife vol. 10 (2021). doi: https://doi.org/10.7554/eLife.72082
Deets KA, Nichols Doyle R, Rauch I, Vance RE. Inflammasome activation leads to cDC1-independent cross-priming of CD8 T cells by epithelial cell-derived antigen. Elife. 2021 Dec 23;10. doi: 10.7554/eLife.72082. PMID: 34939932; PMCID: PMC8719880.
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Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase.

Proceedings of the National Academy of Sciences of the United States of America

Upton HE, Ferguson L, Temoche-Diaz MM, Liu XM, Pimentel SC, Ingolia NT, Schekman R, Collins K.
PMID: 34649994
Proc Natl Acad Sci U S A. 2021 Oct 19;118(42). doi: 10.1073/pnas.2107900118.

Selfish, non-long terminal repeat (non-LTR) retroelements and mobile group II introns encode reverse transcriptases (RTs) that can initiate DNA synthesis without substantial base pairing of primer and template. Biochemical characterization of these enzymes has been limited by recombinant expression...

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Upton HE, Ferguson L, Temoche-Diaz MM, et al. Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase. Proc Natl Acad Sci U S A. 2021;118(42)doi: 10.1073/pnas.2107900118.
Upton, H. E., Ferguson, L., Temoche-Diaz, M. M., Liu, X. M., Pimentel, S. C., Ingolia, N. T., Schekman, R., & Collins, K. (2021). Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase. Proceedings of the National Academy of Sciences of the United States of America, 118(42), . https://doi.org/10.1073/pnas.2107900118
Upton, Heather E, et al. "Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase." Proceedings of the National Academy of Sciences of the United States of America vol. 118,42 (2021). doi: https://doi.org/10.1073/pnas.2107900118
Upton HE, Ferguson L, Temoche-Diaz MM, Liu XM, Pimentel SC, Ingolia NT, Schekman R, Collins K. Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase. Proc Natl Acad Sci U S A. 2021 Oct 19;118(42). doi: 10.1073/pnas.2107900118. PMID: 34649994; PMCID: PMC8594491.
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Showing 1 to 12 of 15 entries