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Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).

PLoS computational biology

Welch L, Brooksbank C, Schwartz R, Morgan SL, Gaeta B, Kilpatrick AM, Mietchen D, Moore BL, Mulder N, Pauley M, Pearson W, Radivojac P, Rosenberg N, Rosenwald A, Rustici G, Warnow T.
PMID: 27175996
PLoS Comput Biol. 2016 May 13;12(5):e1004943. doi: 10.1371/journal.pcbi.1004943. eCollection 2016 May.

No abstract available.

Cite
Welch L, Brooksbank C, Schwartz R, et al. Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). PLoS Comput Biol. 2016;12(5):e1004943doi: 10.1371/journal.pcbi.1004943.
Welch, L., Brooksbank, C., Schwartz, R., Morgan, S. L., Gaeta, B., Kilpatrick, A. M., Mietchen, D., Moore, B. L., Mulder, N., Pauley, M., Pearson, W., Radivojac, P., Rosenberg, N., Rosenwald, A., Rustici, G., & Warnow, T. (2016). Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). PLoS computational biology, 12(5), e1004943. https://doi.org/10.1371/journal.pcbi.1004943
Welch, Lonnie, et al. "Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee)." PLoS computational biology vol. 12,5 (2016): e1004943. doi: https://doi.org/10.1371/journal.pcbi.1004943
Welch L, Brooksbank C, Schwartz R, Morgan SL, Gaeta B, Kilpatrick AM, Mietchen D, Moore BL, Mulder N, Pauley M, Pearson W, Radivojac P, Rosenberg N, Rosenwald A, Rustici G, Warnow T. Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). PLoS Comput Biol. 2016 May 13;12(5):e1004943. doi: 10.1371/journal.pcbi.1004943. eCollection 2016 May. PMID: 27175996; PMCID: PMC4866758.
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Current Progress in Bioinformatics 2016.

Briefings in bioinformatics

Altman R.
PMID: 26628559
Brief Bioinform. 2016 Jan;17(1):1. doi: 10.1093/bib/bbv105. Epub 2015 Nov 30.

No abstract available.

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Altman R. Current Progress in Bioinformatics 2016. Brief Bioinform. 2015;17(1):1doi: 10.1093/bib/bbv105.
Altman, R. (2016). Current Progress in Bioinformatics 2016. Briefings in bioinformatics, 17(1), 1. https://doi.org/10.1093/bib/bbv105
Altman, Russ. "Current Progress in Bioinformatics 2016." Briefings in bioinformatics vol. 17,1 (2016): 1. doi: https://doi.org/10.1093/bib/bbv105
Altman R. Current Progress in Bioinformatics 2016. Brief Bioinform. 2016 Jan;17(1):1. doi: 10.1093/bib/bbv105. Epub 2015 Nov 30. PMID: 26628559.
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NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education.

CBE life sciences education

Dinsdale E, Elgin SC, Grandgenett N, Morgan W, Rosenwald A, Tapprich W, Triplett EW, Pauley MA.
PMID: 26466989
CBE Life Sci Educ. 2015;14(4):le3. doi: 10.1187/cbe.15-06-0123.

No abstract available.

Cite
Dinsdale E, Elgin SC, Grandgenett N, et al. NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education. CBE Life Sci Educ. 2015;14(4):le3doi: 10.1187/cbe.15-06-0123.
Dinsdale, E., Elgin, S. C., Grandgenett, N., Morgan, W., Rosenwald, A., Tapprich, W., Triplett, E. W., & Pauley, M. A. (2015). NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education. CBE life sciences education, 14(4), le3. https://doi.org/10.1187/cbe.15-06-0123
Dinsdale, Elizabeth, et al. "NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education." CBE life sciences education vol. 14,4 (2015): le3. doi: https://doi.org/10.1187/cbe.15-06-0123
Dinsdale E, Elgin SC, Grandgenett N, Morgan W, Rosenwald A, Tapprich W, Triplett EW, Pauley MA. NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education. CBE Life Sci Educ. 2015;14(4):le3. doi: 10.1187/cbe.15-06-0123. PMID: 26466989; PMCID: PMC4710410.
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The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability.

Briefings in bioinformatics

Li JW, Bolser D, Manske M, Giorgi FM, Vyahhi N, Usadel B, Clavijo BJ, Chan TF, Wong N, Zerbino D, Schneider MV.
PMID: 23793381
Brief Bioinform. 2013 Sep;14(5):548-55. doi: 10.1093/bib/bbt045. Epub 2013 Jun 21.

Next-generation sequencing (NGS) is increasingly being adopted as the backbone of biomedical research. With the commercialization of various affordable desktop sequencers, NGS will be reached by increasing numbers of cellular and molecular biologists, necessitating community consensus on bioinformatics protocols...

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Li JW, Bolser D, Manske M, et al. The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability. Brief Bioinform. 2013;14(5):548-55doi: 10.1093/bib/bbt045.
Li, J. W., Bolser, D., Manske, M., Giorgi, F. M., Vyahhi, N., Usadel, B., Clavijo, B. J., Chan, T. F., Wong, N., Zerbino, D., & Schneider, M. V. (2013). The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability. Briefings in bioinformatics, 14(5), 548-55. https://doi.org/10.1093/bib/bbt045
Li, Jing-Woei, et al. "The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability." Briefings in bioinformatics vol. 14,5 (2013): 548-55. doi: https://doi.org/10.1093/bib/bbt045
Li JW, Bolser D, Manske M, Giorgi FM, Vyahhi N, Usadel B, Clavijo BJ, Chan TF, Wong N, Zerbino D, Schneider MV. The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability. Brief Bioinform. 2013 Sep;14(5):548-55. doi: 10.1093/bib/bbt045. Epub 2013 Jun 21. PMID: 23793381; PMCID: PMC3771235.
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Meeting report: Incorporating genomics research into undergraduate curricula.

Cell biology education

Dyer BD, LeBlanc MD.
PMID: 12669103
Cell Biol Educ. 2002;1(4):101-4. doi: 10.1187/cbe.02-07-0016.

No abstract available.

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Dyer BD, LeBlanc MD. Meeting report: Incorporating genomics research into undergraduate curricula. Cell Biol Educ. 2002;1(4):101-4doi: 10.1187/cbe.02-07-0016.
Dyer, B. D., & LeBlanc, M. D. (2002). Meeting report: Incorporating genomics research into undergraduate curricula. Cell biology education, 1(4), 101-4. https://doi.org/10.1187/cbe.02-07-0016
Dyer, Betsey Dexter, and LeBlanc, Mark D. "Meeting report: Incorporating genomics research into undergraduate curricula." Cell biology education vol. 1,4 (2002): 101-4. doi: https://doi.org/10.1187/cbe.02-07-0016
Dyer BD, LeBlanc MD. Meeting report: Incorporating genomics research into undergraduate curricula. Cell Biol Educ. 2002;1(4):101-4. doi: 10.1187/cbe.02-07-0016. PMID: 12669103; PMCID: PMC149802.
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A review of bioinformatics education in the UK.

Briefings in bioinformatics

Counsell D.
PMID: 12715830
Brief Bioinform. 2003 Mar;4(1):7-21. doi: 10.1093/bib/4.1.7.

If the completion of the first draft of the human genome represents the coming of age of bioinformatics, then the emergence of bioinformatics as a university degree subject represents its establishment. In this paper bioinformatics as a subject for...

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Counsell D. A review of bioinformatics education in the UK. Brief Bioinform. 2003;4(1):7-21doi: 10.1093/bib/4.1.7.
Counsell, D. (2003). A review of bioinformatics education in the UK. Briefings in bioinformatics, 4(1), 7-21. https://doi.org/10.1093/bib/4.1.7
Counsell, Damian. "A review of bioinformatics education in the UK." Briefings in bioinformatics vol. 4,1 (2003): 7-21. doi: https://doi.org/10.1093/bib/4.1.7
Counsell D. A review of bioinformatics education in the UK. Brief Bioinform. 2003 Mar;4(1):7-21. doi: 10.1093/bib/4.1.7. PMID: 12715830.
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[Training program for system biologists in Keio University].

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme

Oka K.
PMID: 12795197
Tanpakushitsu Kakusan Koso. 2003 Jun;48(7):829-30.

No abstract available.

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Oka K. [Training program for system biologists in Keio University]. Tanpakushitsu Kakusan Koso. 2003;48(7):829-30
Oka, K. (2003). [Training program for system biologists in Keio University]. Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme, 48(7), 829-30.
Oka, Kotaro. "[Training program for system biologists in Keio University]." Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme vol. 48,7 (2003): 829-30.
Oka K. [Training program for system biologists in Keio University]. Tanpakushitsu Kakusan Koso. 2003 Jun;48(7):829-30. Japanese. PMID: 12795197.
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Bioinformatics to be nurtured online.

Nature

Butler D.
PMID: 11385529
Nature. 2001 May 31;411(6837):513. doi: 10.1038/35079269.

No abstract available.

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Butler D. Bioinformatics to be nurtured online. Nature. 2001;411(6837):513doi: 10.1038/35079269.
Butler, D. (2001). Bioinformatics to be nurtured online. Nature, 411(6837), 513. https://doi.org/10.1038/35079269
Butler, D. "Bioinformatics to be nurtured online." Nature vol. 411,6837 (2001): 513. doi: https://doi.org/10.1038/35079269
Butler D. Bioinformatics to be nurtured online. Nature. 2001 May 31;411(6837):513. doi: 10.1038/35079269. PMID: 11385529.
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Applying instructional design theories to bioinformatics education in microarray analysis and primer design workshops.

Cell biology education

Shachak A, Ophir R, Rubin E.
PMID: 16220141
Cell Biol Educ. 2005;4(3):199-206. doi: 10.1187/cbe.04-11-0055.

The need to support bioinformatics training has been widely recognized by scientists, industry, and government institutions. However, the discussion of instructional methods for teaching bioinformatics is only beginning. Here we report on a systematic attempt to design two bioinformatics...

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Shachak A, Ophir R, Rubin E. Applying instructional design theories to bioinformatics education in microarray analysis and primer design workshops. Cell Biol Educ. 2005;4(3):199-206doi: 10.1187/cbe.04-11-0055.
Shachak, A., Ophir, R., & Rubin, E. (2005). Applying instructional design theories to bioinformatics education in microarray analysis and primer design workshops. Cell biology education, 4(3), 199-206. https://doi.org/10.1187/cbe.04-11-0055
Shachak, Aviv, et al. "Applying instructional design theories to bioinformatics education in microarray analysis and primer design workshops." Cell biology education vol. 4,3 (2005): 199-206. doi: https://doi.org/10.1187/cbe.04-11-0055
Shachak A, Ophir R, Rubin E. Applying instructional design theories to bioinformatics education in microarray analysis and primer design workshops. Cell Biol Educ. 2005;4(3):199-206. doi: 10.1187/cbe.04-11-0055. PMID: 16220141; PMCID: PMC1200775.
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Bioinformatics training: a review of challenges, actions and support requirements.

Briefings in bioinformatics

Schneider MV, Watson J, Attwood T, Rother K, Budd A, McDowall J, Via A, Fernandes P, Nyronen T, Blicher T, Jones P, Blatter MC, De Las Rivas J, Judge DP, van der Gool W, Brooksbank C.
PMID: 20562256
Brief Bioinform. 2010 Nov;11(6):544-51. doi: 10.1093/bib/bbq021. Epub 2010 Jun 18.

As bioinformatics becomes increasingly central to research in the molecular life sciences, the need to train non-bioinformaticians to make the most of bioinformatics resources is growing. Here, we review the key challenges and pitfalls to providing effective training for...

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Schneider MV, Watson J, Attwood T, et al. Bioinformatics training: a review of challenges, actions and support requirements. Brief Bioinform. 2010;11(6):544-51doi: 10.1093/bib/bbq021.
Schneider, M. V., Watson, J., Attwood, T., Rother, K., Budd, A., McDowall, J., Via, A., Fernandes, P., Nyronen, T., Blicher, T., Jones, P., Blatter, M. C., De Las Rivas, J., Judge, D. P., van der Gool, W., & Brooksbank, C. (2010). Bioinformatics training: a review of challenges, actions and support requirements. Briefings in bioinformatics, 11(6), 544-51. https://doi.org/10.1093/bib/bbq021
Schneider, Maria Victoria, et al. "Bioinformatics training: a review of challenges, actions and support requirements." Briefings in bioinformatics vol. 11,6 (2010): 544-51. doi: https://doi.org/10.1093/bib/bbq021
Schneider MV, Watson J, Attwood T, Rother K, Budd A, McDowall J, Via A, Fernandes P, Nyronen T, Blicher T, Jones P, Blatter MC, De Las Rivas J, Judge DP, van der Gool W, Brooksbank C. Bioinformatics training: a review of challenges, actions and support requirements. Brief Bioinform. 2010 Nov;11(6):544-51. doi: 10.1093/bib/bbq021. Epub 2010 Jun 18. PMID: 20562256.
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Dealing with data: training new scientists.

Science (New York, N.Y.)

Severin AJ.
PMID: 21436423
Science. 2011 Mar 25;331(6024):1516. doi: 10.1126/science.331.6024.1516-a.

No abstract available.

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Severin AJ. Dealing with data: training new scientists. Science. 2011;331(6024):1516doi: 10.1126/science.331.6024.1516-a.
Severin, A. J. (2011). Dealing with data: training new scientists. Science (New York, N.Y.), 331(6024), 1516. https://doi.org/10.1126/science.331.6024.1516-a
Severin, Andrew J. "Dealing with data: training new scientists." Science (New York, N.Y.) vol. 331,6024 (2011): 1516. doi: https://doi.org/10.1126/science.331.6024.1516-a
Severin AJ. Dealing with data: training new scientists. Science. 2011 Mar 25;331(6024):1516. doi: 10.1126/science.331.6024.1516-a. PMID: 21436423.
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Multi-stage learning aids applied to hands-on software training.

Briefings in bioinformatics

Rother K, Rother M, Pleus A, Upmeier zu Belzen A.
PMID: 20656749
Brief Bioinform. 2010 Nov;11(6):582-6. doi: 10.1093/bib/bbq024. Epub 2010 Jul 23.

Delivering hands-on tutorials on bioinformatics software and web applications is a challenging didactic scenario. The main reason is that trainees have heterogeneous backgrounds, different previous knowledge and vary in learning speed. In this article, we demonstrate how multi-stage learning...

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Rother K, Rother M, Pleus A, et al. Multi-stage learning aids applied to hands-on software training. Brief Bioinform. 2010;11(6):582-6doi: 10.1093/bib/bbq024.
Rother, K., Rother, M., Pleus, A., & Upmeier zu Belzen, A. (2010). Multi-stage learning aids applied to hands-on software training. Briefings in bioinformatics, 11(6), 582-6. https://doi.org/10.1093/bib/bbq024
Rother, Kristian, et al. "Multi-stage learning aids applied to hands-on software training." Briefings in bioinformatics vol. 11,6 (2010): 582-6. doi: https://doi.org/10.1093/bib/bbq024
Rother K, Rother M, Pleus A, Upmeier zu Belzen A. Multi-stage learning aids applied to hands-on software training. Brief Bioinform. 2010 Nov;11(6):582-6. doi: 10.1093/bib/bbq024. Epub 2010 Jul 23. PMID: 20656749.
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Showing 1 to 12 of 99 entries