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Stand Genomic Sci. 2011 Dec 31;5(3):298-310. doi: 10.4056/sigs.2215005. Epub 2011 Dec 22.

Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1(T)).

Standards in genomic sciences

David Schleheck, Michael Weiss, Sam Pitluck, David Bruce, Miriam L Land, Shunsheng Han, Elizabeth Saunders, Roxanne Tapia, Chris Detter, Thomas Brettin, James Han, Tanja Woyke, Lynne Goodwin, Len Pennacchio, Matt Nolan, Alasdair M Cook, Staffan Kjelleberg, Torsten Thomas

PMID: 22675581 PMCID: PMC3368416 DOI: 10.4056/sigs.2215005

Abstract

Parvibaculum lavamentivorans DS-1(T) is the type species of the novel genus Parvibaculum in the novel family Rhodobiaceae (formerly Phyllobacteriaceae) of the order Rhizobiales of Alphaproteobacteria. Strain DS-1(T) is a non-pigmented, aerobic, heterotrophic bacterium and represents the first tier member of environmentally important bacterial communities that catalyze the complete degradation of synthetic laundry surfactants. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,914,745 bp long genome with its predicted 3,654 protein coding genes is the first completed genome sequence of the genus Parvibaculum, and the first genome sequence of a representative of the family Rhodobiaceae.

Keywords: Gram-negative; Parvibaculum lavamentivorans DS-1; Rhodobiaceae; aerobic; surfactant biodegradation

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