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Mishra AK, Lagier JC, Robert C, et al. Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae. Stand Genomic Sci. 2013;8(2):318-35doi: 10.4056/sigs.3476977.
Mishra, A. K., Lagier, J. C., Robert, C., Raoult, D., & Fournier, P. E. (2013). Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae. Standards in genomic sciences, 8(2), 318-35. https://doi.org/10.4056/sigs.3476977
Mishra, Ajay Kumar, et al. "Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae." Standards in genomic sciences vol. 8,2 (2013): 318-35. doi: https://doi.org/10.4056/sigs.3476977
Mishra AK, Lagier JC, Robert C, Raoult D, Fournier PE. Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae. Stand Genomic Sci. 2013 Jun 13;8(2):318-35. doi: 10.4056/sigs.3476977. eCollection 2013. PMID: 23991262; PMCID: PMC3746429.
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Stand Genomic Sci. 2013 Jun 13;8(2):318-35. doi: 10.4056/sigs.3476977. eCollection 2013.

Genome sequence and description of Timonella senegalensis gen. nov., sp. nov., a new member of the suborder Micrococcinae.

Standards in genomic sciences

Ajay Kumar Mishra, Jean-Christophe Lagier, Catherine Robert, Didier Raoult, Pierre-Edouard Fournier

Affiliations

  1. Aix-Marseille Université, URMITE, Faculté de médecine, Marseille, France.

PMID: 23991262 PMCID: PMC3746429 DOI: 10.4056/sigs.3476977

Abstract

Timonella senegalensis strain JC301(T) gen. nov., sp. nov. is the type strain of T. senegalensis gen. nov., sp. nov., a new species within the newly proposed genus Timonella. This bacterial strain was isolated from the fecal flora of a healthy Senegalese patient. In this report, we detail the features of this organism, together with the complete genome sequence and annotation. Timonella senegalensis strain JC301(T) exhibits the highest 16S rRNA similarity (95%) with Sanguibacter marinus, the closest validly published bacterial species. The genome of T. senegalensis strain JC301(T) is 3,010,102-bp long, with one chromosome and no plasmid. The genome contains 2,721 protein-coding genes and 72 RNA genes, including 5 rRNA genes. The genomic annotation revealed that T. senegalensis strain JC301(T) possesses the complete complement of enzymes necessary for the de novo biosynthesis of amino acids and vitamins (except for riboflavin and biotin), as well as the enzymes involved in the metabolism of various carbon sources, chaperone genes, and genes involved in the regulation of polyphosphate and glycogen levels.

Keywords: Timonella senegalensis; culturomics; genome; taxono-genomics

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