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Stand Genomic Sci. 2013 Jun 13;8(2):336-51. doi: 10.4056/sigs.3567059. eCollection 2013.

Non contiguous-finished genome sequence and description of Dielma fastidiosa gen. nov., sp. nov., a new member of the Family Erysipelotrichaceae.

Standards in genomic sciences

Dhamodharan Ramasamy, Jean-Christophe Lagier, Thi Tien Nguyen, Didier Raoult, Pierre-Edouard Fournier

Affiliations

  1. Aix-Marseille Université, URMITE, Faculté de médecine, Marseille, France.

PMID: 23991263 PMCID: PMC3746426 DOI: 10.4056/sigs.3567059

Abstract

Dielma fastidiosa strain JC13(T) gen. nov., sp. nov. is the type strain of D. fastidiosa gen. nov., sp. nov., the type species of a new genus within the family Erysipelotrichaceae. This strain, whose draft genome is described here, was isolated from the fecal flora of a healthy 16-year-old male Senegalese volunteer. D. fastidiosa is a Gram-negative anaerobic rod. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,574,031 bp long genome comprises a 3,556,241-bp chromosome and a 17,790-bp plasmid. The chromosome contains 3,441 protein-coding and 50 RNA genes, including 3 rRNA genes, whereas the plasmid contains 17 protein-coding genes.

Keywords: Culturomics; Dielma fastidiosa; Genome; Taxono-genomics

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