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Theor Appl Genet. 1985 Aug;70(5):491-6. doi: 10.1007/BF00305981.

A FORTRAN program for the calculation and analysis of two-locus linkage disequilibrium coefficients.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

W C Black, E S Krafsur

Affiliations

  1. Department of Entomology, Iowa State University, 50011, Ames, IA, USA.

PMID: 24253058 DOI: 10.1007/BF00305981

Abstract

A FORTRAN program was written that calculates composite linkage disequilibrium coefficients from genotypic data. Chi-square tests determine whether coefficients calculated for allele and locus pairs are significantly greater than zero. A subroutine is provided that partitions the variance in linkage disequilibrium into within- and between-subpopulation components. Output obtained from analysis of allozyme data collected from natural subpopulations of the house fly (Musca domestica L.) are included to illustrate features of the program.

References

  1. Genet Res. 1978 Nov;32(3):215-29 - PubMed
  2. Genetics. 1973 Apr;73(4):659-74 - PubMed
  3. Proc Natl Acad Sci U S A. 1982 Mar;79(6):1940-4 - PubMed
  4. Nature. 1982 Apr 15;296(5858):627-31 - PubMed
  5. Genetics. 1982 May;101(1):139-55 - PubMed
  6. Genetics. 1980 Jan;94(1):217-34 - PubMed
  7. Theor Appl Genet. 1968 Jun;38(6):226-31 - PubMed
  8. Genetics. 1974 Nov;78(3):921-36 - PubMed
  9. Genetics. 1979 Aug;92(4):1295-314 - PubMed
  10. Proc Natl Acad Sci U S A. 1973 Apr;70(4):1156-60 - PubMed
  11. Genetics. 1977 Jun;86(2 Pt. 1):447-54 - PubMed
  12. Genetics. 1977 Apr;85(4):733-52 - PubMed
  13. Biometrics. 1979 Mar;35(1):235-54 - PubMed
  14. Proc Natl Acad Sci U S A. 1982 Sep;79(18):5631-5 - PubMed
  15. Genetics. 1973 Mar;73(3):487-96 - PubMed
  16. Theor Appl Genet. 1985 Aug;70(5):484-90 - PubMed

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