Display options
Share it on

Plant Physiol. 2014 Jul;165(3):1105-1119. doi: 10.1104/pp.114.238873. Epub 2014 May 30.

The Emerging Role of Reactive Oxygen Species Signaling during Lateral Root Development.

Plant physiology

Concepción Manzano, Mercedes Pallero-Baena, Ilda Casimiro, Bert De Rybel, Beata Orman-Ligeza, Gert Van Isterdael, Tom Beeckman, Xavier Draye, Pedro Casero, Juan C Del Pozo

Affiliations

  1. Centro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.).
  2. Centro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain (C.M., M.P.-B., I.C., J.C.d.P.);Universidad de Extremadura, Facultad de Ciencias, 06006 Badajoz, Spain (M.P.-B., I.C., P.C.);Department of Plant Systems Biology, Integrative Plant Biology Division, Flanders Interuniversity Institute for Biotechnology, B-9052 Ghent, Belgium (B.D.R., B.O.-L., G.V.I., T.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (B.D.R., G.V.I., T.B.); andUniversite Catholique de Louvain, Earth and Life Institute, B-1348 Louvain-la-Neuve, Belgium (B.O.-L., X.D.) [email protected].

PMID: 24879433 PMCID: PMC4081325 DOI: 10.1104/pp.114.238873

Abstract

Overall root architecture is the combined result of primary and lateral root growth and is influenced by both intrinsic genetic programs and external signals. One of the main questions for root biologists is how plants control the number of lateral root primordia and their emergence through the main root. We recently identified S-phase kinase-associated protein2 (SKP2B) as a new early marker for lateral root development. Here, we took advantage of its specific expression pattern in Arabidopsis (Arabidopsis thaliana) in a cell-sorting and transcriptomic approach to generate a lateral root-specific cell sorting SKP2B data set that represents the endogenous genetic developmental program. We first validated this data set by showing that many of the identified genes have a function during root growth or lateral root development. Importantly, genes encoding peroxidases were highly represented in our data set. Thus, we next focused on this class of enzymes and showed, using genetic and chemical inhibitor studies, that peroxidase activity and reactive oxygen species signaling are specifically required during lateral root emergence but, intriguingly, not for primordium specification itself.

© 2014 American Society of Plant Biologists. All Rights Reserved.

References

  1. Plant Physiol. 2011 Jan;155(1):384-98 - PubMed
  2. Plant Cell. 1997 Feb;9(2):209-21 - PubMed
  3. Science. 2007 Nov 2;318(5851):801-6 - PubMed
  4. Plant Cell. 2006 Sep;18(9):2224-35 - PubMed
  5. Plant Physiol. 1994 Feb;104(2):315-320 - PubMed
  6. Cell. 2010 Nov 12;143(4):606-16 - PubMed
  7. Bioinformatics. 2003 Jan 22;19(2):185-93 - PubMed
  8. Plant J. 2005 May;42(3):444-53 - PubMed
  9. Trends Plant Sci. 2012 Jun;17(6):326-31 - PubMed
  10. Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):5146-51 - PubMed
  11. Biochem J. 1996 Feb 1;313 ( Pt 3):841-7 - PubMed
  12. Nature. 2010 Apr 8;464(7290):913-6 - PubMed
  13. Plant Cell. 2002 Oct;14(10):2339-51 - PubMed
  14. Plant Mol Biol. 2014 May;85(1-2):49-61 - PubMed
  15. Trends Plant Sci. 2013 Aug;18(8):450-8 - PubMed
  16. Plant J. 2002 Jan;29(2):153-68 - PubMed
  17. Plant Physiol. 2010 May;153(1):34-40 - PubMed
  18. Nucleic Acids Res. 2002 Jan 1;30(1):207-10 - PubMed
  19. Plant Physiol. 2008 Jun;147(2):528-42 - PubMed
  20. Development. 1997 Jan;124(1):33-44 - PubMed
  21. Plant Mol Biol. 1997 Mar;33(5):887-95 - PubMed
  22. Development. 2007 Feb;134(4):681-90 - PubMed
  23. Plant J. 2008 Mar;53(5):705-16 - PubMed
  24. Science. 2008 Oct 24;322(5901):594-7 - PubMed
  25. Plant Cell Rep. 2005 Jul;24(5):255-65 - PubMed
  26. Plant Cell Physiol. 2001 May;42(5):462-8 - PubMed
  27. Cell. 2003 Nov 26;115(5):591-602 - PubMed
  28. Gene. 2002 Apr 17;288(1-2):129-38 - PubMed
  29. Plant J. 2004 May;38(3):545-61 - PubMed
  30. Development. 1993 Sep;119(1):71-84 - PubMed
  31. Annu Rev Cell Dev Biol. 2005;21:485-509 - PubMed
  32. Plant Physiol. 2012 Oct;160(2):749-62 - PubMed
  33. Proc Natl Acad Sci U S A. 2008 Jun 24;105(25):8790-4 - PubMed
  34. Plant Mol Biol. 2009 Mar;69(4):437-49 - PubMed
  35. Plant J. 2000 Oct;24(2):265-73 - PubMed
  36. Physiol Plant. 2012 Jul;145(3):450-60 - PubMed
  37. Nat Chem Biol. 2012 Sep;8(9):798-805 - PubMed
  38. Science. 2010 Sep 10;329(5997):1306-11 - PubMed
  39. Trends Plant Sci. 2003 Apr;8(4):165-71 - PubMed
  40. Nat Cell Biol. 2008 Aug;10(8):946-54 - PubMed
  41. Curr Biol. 2003 Aug 19;13(16):1435-41 - PubMed
  42. Dev Cell. 2008 Dec;15(6):913-22 - PubMed
  43. Planta. 2009 Mar;229(4):823-36 - PubMed
  44. Nat Cell Biol. 2012 Oct;14(10):991-8 - PubMed
  45. J Biosci Bioeng. 2007 Jul;104(1):34-41 - PubMed
  46. Int Rev Cytol. 1997;176:87-132 - PubMed
  47. Plant Cell. 2005 Nov;17(11):3035-50 - PubMed
  48. Curr Biol. 2010 Oct 12;20(19):1697-706 - PubMed
  49. J Exp Bot. 2014 Mar;65(5):1403-13 - PubMed

Publication Types