Display options
Share it on

Asian-Australas J Anim Sci. 2013 Nov;26(11):1529-35. doi: 10.5713/ajas.2013.13278.

Identification and Association of SNPs in TBC1D1 Gene with Growth Traits in Two Rabbit Breeds.

Asian-Australasian journal of animal sciences

Zhi-Juan Yang, Lu Fu, Gong-Wei Zhang, Yu Yang, Shi-Yi Chen, Jie Wang, Song-Jia Lai

Affiliations

  1. Institute of Animal Genetics and Breeding, Sichuan Agricultural University, Chengdu Campus, Chengdu 611130, China.

PMID: 25049738 PMCID: PMC4093812 DOI: 10.5713/ajas.2013.13278

Abstract

The TBC1D1 plays a key role in body energy homeostasis by regulating the insulin-stimulated glucose uptake in skeletal muscle. The present study aimed to identify the association between genetic polymorphisms of TBC1D1 and body weight (BW) in rabbits. Among the total of 12 SNPs detected in all 20 exons, only one SNP was non-synonymous (c.214G>A. p.G72R) located in exon 1. c.214G>A was subsequently genotyped among 491 individuals from two rabbit breeds by the high-resolution melting method. Allele A was the predominant allele with frequencies of 0.7780 and 0.6678 in European white rabbit (EWR, n = 205) and New Zealand White rabbit (NZW, n = 286), respectively. The moderate polymorphism information content (0.250.05). Our results implied that the c.214G>A of TBC1D1 gene might be one of the candidate loci affecting the trait of 35 d BW in the rabbit.

Keywords: Growth Traits; High-resolution Melting; Polymorphism; Rabbit; TBC1D1

References

  1. Mol Biol Rep. 2011 Feb;38(2):1425-31 - PubMed
  2. Clin Chem. 2003 Jun;49(6 Pt 1):853-60 - PubMed
  3. Int J Obes (Lond). 2007 May;31(5):829-41 - PubMed
  4. Hum Mutat. 2009 Jun;30(6):884-90 - PubMed
  5. Am J Epidemiol. 1999 Apr 15;149(8):706-11 - PubMed
  6. Nucleic Acids Res. 2009 Jan;37(Database issue):D229-32 - PubMed
  7. Biochem J. 2008 Jul 15;413(2):201-15 - PubMed
  8. BMC Genet. 2009 Feb 17;10:5 - PubMed
  9. Hum Mol Genet. 2006 Sep 15;15(18):2709-20 - PubMed
  10. Nat Genet. 2008 Nov;40(11):1354-9 - PubMed
  11. Nucleic Acids Res. 2013 Jan;41(Database issue):D348-52 - PubMed
  12. FEBS Lett. 2002 Feb 20;513(1):67-70 - PubMed
  13. Metabolism. 1965 Mar;14:271-80 - PubMed
  14. Am J Hum Genet. 1980 May;32(3):314-31 - PubMed
  15. Nature. 1995 Dec 7;378(6557):584-92 - PubMed
  16. J Biol Chem. 2001 Apr 13;276(15):12135-9 - PubMed
  17. Diabetes Metab Res Rev. 2005 Jan-Feb;21(1):3-14 - PubMed
  18. PLoS One. 2011;6(7):e21872 - PubMed
  19. Hum Mol Genet. 2008 Jun 15;17(12):1798-802 - PubMed
  20. J Biol Chem. 1998 Apr 24;273(17):10381-8 - PubMed
  21. J Biomol Screen. 2010 Jul;15(6):623-9 - PubMed
  22. Diabetes. 2009 May;58(5):1096-104 - PubMed
  23. J Biol Chem. 2008 Apr 11;283(15):9787-96 - PubMed
  24. J Clin Invest. 2000 Aug;106(4):473-81 - PubMed
  25. Nat Rev Genet. 2001 Feb;2(2):130-8 - PubMed
  26. Nature. 2010 Mar 25;464(7288):587-91 - PubMed
  27. Am J Physiol. 1992 Jun;262(6 Pt 2):R1025-32 - PubMed
  28. Biochem J. 2008 May 1;411(3):647-55 - PubMed
  29. Endocrinology. 2005 Dec;146(12):5071-8 - PubMed
  30. Nat Rev Genet. 2011 Aug 31;12(10):683-91 - PubMed
  31. Am J Physiol Endocrinol Metab. 2008 Jul;295(1):E29-37 - PubMed
  32. Endocr Rev. 2004 Apr;25(2):177-204 - PubMed
  33. Vet Immunol Immunopathol. 2011 Dec 15;144(3-4):482-6 - PubMed
  34. Nat Protoc. 2007;2(1):59-66 - PubMed

Publication Types