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van der Nest MA, Bihon W, De Vos L, et al. IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis. IMA Fungus. 2014;5(1):135-40doi: 10.5598/imafungus.2014.05.01.13.
van der Nest, M. A., Bihon, W., De Vos, L., Naidoo, K., Roodt, D., Rubagotti, E., Slippers, B., Steenkamp, E. T., Wilken, P. M., Wilson, A., Wingfield, M. J., & Wingfield, B. D. (2014). IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis. IMA fungus, 5(1), 135-40. https://doi.org/10.5598/imafungus.2014.05.01.13
van der Nest, Magriet A, et al. "IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis." IMA fungus vol. 5,1 (2014): 135-40. doi: https://doi.org/10.5598/imafungus.2014.05.01.13
van der Nest MA, Bihon W, De Vos L, Naidoo K, Roodt D, Rubagotti E, Slippers B, Steenkamp ET, Wilken PM, Wilson A, Wingfield MJ, Wingfield BD. IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis. IMA Fungus. 2014 Jun;5(1):135-40. doi: 10.5598/imafungus.2014.05.01.13. Epub 2014 Jun 19. PMID: 25083413; PMCID: PMC4107891.
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IMA Fungus. 2014 Jun;5(1):135-40. doi: 10.5598/imafungus.2014.05.01.13. Epub 2014 Jun 19.

IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis.

IMA fungus

Magriet A van der Nest, Wubetu Bihon, Lieschen De Vos, Kershney Naidoo, Danielle Roodt, Enrico Rubagotti, Bernard Slippers, Emma T Steenkamp, P Markus Wilken, Andrea Wilson, Michael J Wingfield, Brenda D Wingfield

Affiliations

  1. Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa.
  2. Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa ; Agricultural Research Council, Vegetable and Ornamental Plant Institute, P. Bag X293, Pretoria 0001, South Africa.
  3. Genomic Research Institute, University of Pretoria, Pretoria, 0002, South Africa;
  4. Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Private bag x20, Pretoria 0028, South Africa.

PMID: 25083413 PMCID: PMC4107891 DOI: 10.5598/imafungus.2014.05.01.13

Abstract

The draft nuclear genomes of Diplodia sapinea, Ceratocystis moniliformis s. str., and C. manginecans are presented. Diplodia sapinea is an important shoot-blight and canker pathogen of Pinus spp., C. moniliformis is a saprobe associated with wounds on a wide range of woody angiosperms and C. manginecans is a serious wilt pathogen of mango and Acacia mangium. The genome size of D. sapinea is estimated at 36.97 Mb and contains 13 020 predicted genes. Ceratocystis moniliformis includes 25.43 Mb and is predicted to encode at least 6 832 genes. This is smaller than that reported for the mango wilt pathogen C. manginecans which is 31.71 Mb and is predicted to encode at least 7 494 genes. The latter is thus more similar to C. fimbriata s.str., the type species of the genus. The genome sequences presented here provide an important resource to resolve issues pertaining to the taxonomy, biology and evolution of these fungi.

Keywords: Ceratocystis fimbriata; Diplodia pinea; Dothideomycetes; Endophyte; mango wilt

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