Display options
Share it on

Meta Gene. 2014 Jan 20;2:134-42. doi: 10.1016/j.mgene.2013.12.003. eCollection 2014 Dec.

Genetic polymorphism of glutathione S-transferase P1 (GSTP1) in Delhi population and comparison with other global populations.

Meta gene

Anita Sharma, Arvind Pandey, Shashi Sharma, Indranil Chatterjee, Ravi Mehrotra, Ashok Sehgal, Joginder K Sharma

Affiliations

  1. Division of Molecular Diagnostics, Institute of Cytology and Preventive Oncology (ICMR), I-7, sector 39, NOIDA-201301, India.
  2. Centre for Biotechnology, University of Allahabad, Allahabad- 211001, India ; Division of Molecular Oncology, Institute of Cytology and Preventive Oncology (ICMR), I-7, NOIDA, India.
  3. Division of Epidemiology and Biostatistics, India.
  4. Department of Life Science, Central University of Tamilnadu, Thiruvarur-610101, India.
  5. Institute of Cytology and Preventive Oncology (ICMR), I-7, Sector 39, NOIDA-201301, Uttar Pradesh, India.

PMID: 25606397 PMCID: PMC4287809 DOI: 10.1016/j.mgene.2013.12.003

Abstract

Glutathione S-transferases (GSTs) belong to a super family of phase II detoxification enzymes, which play an important role in protecting cells from damage caused by endogenous and exogenous compounds by conjugating reactive intermediates with glutathione to produce less reactive water-soluble compounds. In the present study, we determined the frequencies of two polymorphisms in exon 5 and exon 6 of GSTP1 gene in 500 normal individuals from Delhi. GSTP1 polymorphism was analysed by PCR-RFLP using amplification refractory mutation system (ARMS) assay. Two polymorphic sites in GSTP1 (Ile105 → Val105; Ala114 → Val114) have been analysed simultaneously, which results in four alleles: GSTP1*A (wild-type Ile105; Ala114), GSTP1*B (Val105; Ala114), GSTP1*C (Val105; Val114) and GSTP1*D (Ile105; Val114). The GSTP1 allele frequency in Delhi population was 0.663, 0.248, 0.069, and 0.020 for GSTP1*A, GSTP1*B, GSTP1*C, and GSTP1*D respectively. The frequency of Ile105 and Val105 allele was 0.683 and 0.317 respectively and it was calculated for the purpose of comparison with published data where all the four alleles were not analysed. GSTP1 alleles from Delhi population were compared with reported frequencies from all over India, and from other ethnic groups worldwide. This study would provide a basic database for future genetic studies.

Keywords: ARMS assay; GST polymorphism; GSTP1; Glutathione S-transferase; North Indians

References

  1. Zhonghua Kou Qiang Yi Xue Za Zhi. 2002 Mar;37(2):90-3 - PubMed
  2. Eur Urol. 2005 Aug;48(2):339-44 - PubMed
  3. Am J Epidemiol. 2000 Jan 1;151(1):7-32 - PubMed
  4. Genet Mol Res. 2002 Sep 30;1(3):233-40 - PubMed
  5. Chin Med J (Engl). 2011 Jan;124(2):199-204 - PubMed
  6. Asian Pac J Cancer Prev. 2005 Jul-Sep;6(3):309-14 - PubMed
  7. Ann Epidemiol. 2010 Feb;20(2):108-21 - PubMed
  8. Ind Health. 2000 Apr;38(2):143-52 - PubMed
  9. Asian Pac J Cancer Prev. 2004 Oct-Dec;5(4):362-5 - PubMed
  10. Cancer Epidemiol Biomarkers Prev. 1999 Apr;8(4 Pt 1):289-92 - PubMed
  11. Asian Pac J Cancer Prev. 2005 Jul-Sep;6(3):315-9 - PubMed
  12. Int J Cancer. 2003 Oct 20;107(1):139-44 - PubMed
  13. Cancer Epidemiol Biomarkers Prev. 2000 Jun;9(6):567-73 - PubMed
  14. Asian Pac J Cancer Prev. 2005 Jul-Sep;6(3):346-52 - PubMed
  15. Am J Pharmacogenomics. 2003;3(3):157-72 - PubMed
  16. Dis Markers. 2011;31(4):231-9 - PubMed
  17. J Korean Med Sci. 2005 Dec;20(6):1089-92 - PubMed
  18. Annu Rev Pharmacol Toxicol. 2005;45:51-88 - PubMed
  19. Cancer Res. 1987 Nov 1;47(21):5626-30 - PubMed
  20. Pharmacogenetics. 2000 Aug;10(6):545-56 - PubMed
  21. Eur J Cancer. 2007 Dec;43(18):2698-706 - PubMed
  22. Clin Chem Lab Med. 2002 Sep;40(9):952-7 - PubMed
  23. Biochem J. 1992 Feb 15;282 ( Pt 1):305-6 - PubMed
  24. Pharmacogenetics. 1998 Feb;8(1):83-5 - PubMed
  25. Biochem J. 1988 Oct 1;255(1):79-83 - PubMed
  26. Respir Res. 2001;2(4):255-60 - PubMed
  27. Arch Toxicol. 2000 Nov;74(9):521-6 - PubMed
  28. Anticancer Res. 2009 May;29(5):1631-5 - PubMed
  29. Mutagenesis. 2004 Jul;19(4):291-8 - PubMed
  30. Carcinogenesis. 1997 Jul;18(7):1285-9 - PubMed
  31. J Genet. 2012 Apr 17;91(1):e60-3 - PubMed
  32. Asian Pac J Cancer Prev. 2010;11(4):1067-72 - PubMed
  33. Clin Chim Acta. 2003 Mar;329(1-2):127-32 - PubMed
  34. Asian Pac J Cancer Prev. 2007 Apr-Jun;8(2):253-7 - PubMed
  35. Anticancer Res. 2001 May-Jun;21(3C):2237-42 - PubMed
  36. Carcinogenesis. 2001 Jul;22(7):1053-60 - PubMed
  37. J Mol Biol. 1998 May 8;278(3):687-98 - PubMed
  38. J Gynecol Oncol. 2010 Sep;21(3):169-73 - PubMed
  39. Asian Pac J Cancer Prev. 2006 Apr-Jun;7(2):325-8 - PubMed
  40. Asian Pac J Cancer Prev. 2012;13(7):3247-52 - PubMed
  41. Chest. 2005 Sep;128(3):1156-62 - PubMed
  42. Ann Rheum Dis. 1999 Mar;58(3):164-8 - PubMed
  43. Breast Cancer Res Treat. 2011 Jan;125(1):253-9 - PubMed
  44. Carcinogenesis. 1997 Apr;18(4):641-4 - PubMed
  45. J Postgrad Med. 2010 Jul-Sep;56(3):176-81 - PubMed
  46. Pharmacogenomics. 2008 Jan;9(1):93-104 - PubMed
  47. Cancer Epidemiol Biomarkers Prev. 2000 Jun;9(6):551-6 - PubMed
  48. Cancer Epidemiol Biomarkers Prev. 2002 May;11(5):445-50 - PubMed
  49. Clin Chem Lab Med. 2003 Apr;41(4):600-5 - PubMed
  50. Mutat Res. 2001 Oct 1;482(1-2):21-6 - PubMed
  51. Clin Chem. 2005 Jun;51(6):944-51 - PubMed
  52. Genet Mol Res. 2011 Dec 06;10(4):3038-45 - PubMed
  53. Ann Hum Genet. 1989 Jul;53(Pt 3):205-13 - PubMed
  54. Asian Pac J Cancer Prev. 2012;13(11):5647-52 - PubMed
  55. Breast Cancer Res Treat. 2010 Jun;121(2):497-502 - PubMed
  56. Pharmacogenetics. 2001 Jun;11(4):325-30 - PubMed
  57. Cancer Epidemiol Biomarkers Prev. 2001 Mar;10(3):229-36 - PubMed
  58. Br J Clin Pharmacol. 2004 Feb;57(2):213-7 - PubMed
  59. Cancer Epidemiol Biomarkers Prev. 2000 Nov;9(11):1267-8 - PubMed
  60. Cancer Epidemiol Biomarkers Prev. 2001 Dec;10(12):1239-48 - PubMed
  61. Lung Cancer. 2007 Feb;55(2):137-44 - PubMed
  62. Recent Results Cancer Res. 1998;154:47-85 - PubMed
  63. Carcinogenesis. 1998 Feb;19(2):275-80 - PubMed
  64. Prostate. 2006 Feb 1;66(2):146-56 - PubMed

Publication Types