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Genome Announc. 2015 Mar 05;3(2). doi: 10.1128/genomeA.00038-15.

Complete Genome of Geobacter pickeringii G13T, a Metal-Reducing Isolate from Sedimentary Kaolin Deposits.

Genome announcements

Jonathan P Badalamenti, Daniel R Bond

Affiliations

  1. Department of Microbiology and BioTechnology Institute, University of Minnesota, Saint Paul, Minnesota, USA.
  2. Department of Microbiology and BioTechnology Institute, University of Minnesota, Saint Paul, Minnesota, USA [email protected].

PMID: 25744992 PMCID: PMC4358379 DOI: 10.1128/genomeA.00038-15

Abstract

We used PacBio sequencing to assemble the genome of the pristine freshwater isolate Geobacter pickeringii G13(T) into a single 3,618,700-bp circular chromosome polished to 99.999% accuracy (quality value [QV], 50). This isolate shares several features with other Geobacter spp., including genes for degradation of aromatics and an abundance of multiheme c-type cytochromes.

Copyright © 2015 Badalamenti and Bond.

References

  1. Science. 2013 Mar 15;339(6125):1332-5 - PubMed
  2. Biosens Bioelectron. 2009 Aug 15;24(12):3498-503 - PubMed
  3. Nat Methods. 2013 Jun;10(6):563-9 - PubMed
  4. BMC Genomics. 2011 Jan 11;12:21 - PubMed
  5. BMC Microbiol. 2009 May 27;9:109 - PubMed
  6. BMC Genomics. 2010 Jan 17;11:40 - PubMed
  7. BMC Bioinformatics. 2008 Feb 01;9:79 - PubMed
  8. Genome Biol. 2013;14(9):R101 - PubMed
  9. Int J Syst Evol Microbiol. 2007 Jan;57(Pt 1):126-35 - PubMed
  10. BMC Genomics. 2010 Sep 09;11:490 - PubMed
  11. J Bacteriol. 2007 Oct;189(19):6824-31 - PubMed

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