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Suleimanova AD, Toymentseva AA, Boulygina EA, et al. High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1. Stand Genomic Sci. 2015;10:95doi: 10.1186/s40793-015-0093-y.
Suleimanova, A. D., Toymentseva, A. A., Boulygina, E. A., Kazakov, S. V., Mardanova, A. M., Balaban, N. P., & Sharipova, M. R. (2015). High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1. Standards in genomic sciences, 1095. https://doi.org/10.1186/s40793-015-0093-y
Suleimanova, Aliya D, et al. "High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1." Standards in genomic sciences vol. 10 (2015): 95. doi: https://doi.org/10.1186/s40793-015-0093-y
Suleimanova AD, Toymentseva AA, Boulygina EA, Kazakov SV, Mardanova AM, Balaban NP, Sharipova MR. High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1. Stand Genomic Sci. 2015 Nov 11;10:95. doi: 10.1186/s40793-015-0093-y. eCollection 2015. PMID: 26566420; PMCID: PMC4642748.
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Stand Genomic Sci. 2015 Nov 11;10:95. doi: 10.1186/s40793-015-0093-y. eCollection 2015.

High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1.

Standards in genomic sciences

Aliya D Suleimanova, Anna A Toymentseva, Eugenia A Boulygina, Sergey V Kazakov, Ayslu M Mardanova, Nelly P Balaban, Margarita R Sharipova

Affiliations

  1. Laboratory of Biosynthesis and Bioengineering of the Enzymes, Institute of Fundamental Medicine and Biology, Kazan (Volga region) Federal University, Kazan, Russia.
  2. Interdisciplinary Center for Proteomics Research, Kazan (Volga region) Federal University, Kazan, Russia.
  3. Omics Technologies Laboratory, Kazan (Volga region) Federal University, Kazan, Russia.
  4. Computer Technologies Laboratory, Information Technologies, Mechanics & Optics University, Saint Petersburg, Russia.

PMID: 26566420 PMCID: PMC4642748 DOI: 10.1186/s40793-015-0093-y

Abstract

Strain 3.5.1 was isolated from soils of the Republic of Tatarstan, Russia, on the basis of presence of a high phytate-degrading activity. Strains with such activities attract special interest because of its potential use as feed additives and natural manures. Strain 3.5.1 harbors a 99 % 16S rRNA nucleotide sequence similarity to different Pantoea species (P. vagans, P. ananatis, P. agglomerans, P. anthophila and Pantoea sp.) and exhibits unique biochemical properties that do not allow strain identification up to species. Moreover, the strain 3.5.1 shows a low ANI and MALDI-TOF Mass Spectrometry scores. Thus, it is likely that the strain 3.5.1 represents a new Pantoea species. Here, we present the genome sequence of Pantoea sp. strain 3.5.1. The 4,964,649 bp draft genome consists of 23 contigs with 4,556 protein-coding and 143 RNA genes. Genome sequencing and annotation revealed two phytase genes and putative regulatory genes controlling its activity.

Keywords: 454; Genome; Ion Torrent; Pantoea; Phytase; Strain 3.5.1

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