Display options
Share it on

Sci Adv. 2015 Dec 04;1(11):e1501087. doi: 10.1126/sciadv.1501087. eCollection 2015 Dec.

Atomic-resolution structure of cytoskeletal bactofilin by solid-state NMR.

Science advances

Chaowei Shi, Pascal Fricke, Lin Lin, Veniamin Chevelkov, Melanie Wegstroth, Karin Giller, Stefan Becker, Martin Thanbichler, Adam Lange

Affiliations

  1. Department of Molecular Biophysics, Leibniz-Institut für Molekulare Pharmakologie, 13125 Berlin, Germany.
  2. Prokaryotic Cell Biology Group, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany. ; Faculty of Biology, Philipps-Universität, 35043 Marburg, Germany.
  3. Department of NMR-Based Structural Biology, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.
  4. Prokaryotic Cell Biology Group, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany. ; Faculty of Biology, Philipps-Universität, 35043 Marburg, Germany. ; LOEWE Center for Synthetic Microbiology, Philipps-Universität, 35043 Marburg, Germany.
  5. Department of Molecular Biophysics, Leibniz-Institut für Molekulare Pharmakologie, 13125 Berlin, Germany. ; Institut für Biologie, Humboldt-Universität zu Berlin, 10115 Berlin, Germany.

PMID: 26665178 PMCID: PMC4672760 DOI: 10.1126/sciadv.1501087

Abstract

Bactofilins are a recently discovered class of cytoskeletal proteins of which no atomic-resolution structure has been reported thus far. The bacterial cytoskeleton plays an essential role in a wide range of processes, including morphogenesis, cell division, and motility. Among the cytoskeletal proteins, the bactofilins are bacteria-specific and do not have a eukaryotic counterpart. The bactofilin BacA of the species Caulobacter crescentus is not amenable to study by x-ray crystallography or solution nuclear magnetic resonance (NMR) because of its inherent noncrystallinity and insolubility. We present the atomic structure of BacA calculated from solid-state NMR-derived distance restraints. We show that the core domain of BacA forms a right-handed β helix with six windings and a triangular hydrophobic core. The BacA structure was determined to 1.0 Å precision (heavy-atom root mean square deviation) on the basis of unambiguous restraints derived from four-dimensional (4D) HN-HN and 2D C-C NMR spectra.

Keywords: Bactofilins; Cytoskeletal proteins; Protein Structure; Solid-state NMR

References

  1. J Magn Reson. 1999 Aug;139(2):389-401 - PubMed
  2. J Biomol NMR. 2009 Nov;45(3):319-27 - PubMed
  3. Nature. 2015 Jul 2;523(7558):106-10 - PubMed
  4. Chemphyschem. 2011 Apr 4;12(5):915-8 - PubMed
  5. J Am Chem Soc. 2010 Feb 24;132(7):2145-7 - PubMed
  6. PLoS One. 2015 Mar 24;10(3):e0121074 - PubMed
  7. J Magn Reson. 2014 May;242:180-8 - PubMed
  8. Cell. 2003 Dec 12;115(6):705-13 - PubMed
  9. Cell. 2010 May 28;141(5):822-33 - PubMed
  10. J Biomol NMR. 1995 Nov;6(3):277-93 - PubMed
  11. Cell. 2013 Sep 12;154(6):1257-68 - PubMed
  12. Mol Microbiol. 2011 May;80(4):1031-51 - PubMed
  13. Nat Methods. 2015 Apr;12(4):361-5 - PubMed
  14. Science. 2013 Feb 22;339(6122):913-5 - PubMed
  15. J Am Chem Soc. 2002 Aug 21;124(33):9704-5 - PubMed
  16. J Biomol NMR. 2001 Aug;20(4):325-31 - PubMed
  17. Proteins. 2007 Mar 1;66(4):778-95 - PubMed
  18. Nature. 2012 May 20;486(7402):276-9 - PubMed
  19. Nat Commun. 2014 Sep 29;5:4976 - PubMed
  20. Cytoskeleton (Hoboken). 2013 Aug;70(8):409-23 - PubMed
  21. J Magn Reson. 2000 Jan;142(1):97-101 - PubMed
  22. EMBO J. 2010 Jan 20;29(2):327-39 - PubMed
  23. Nature. 1991 Nov 14;354(6349):161-4 - PubMed
  24. J Am Chem Soc. 2011 Apr 20;133(15):5905-12 - PubMed
  25. J Biomol NMR. 2012 Nov;54(3):291-305 - PubMed
  26. Nature. 2002 Nov 7;420(6911):98-102 - PubMed
  27. Proc Natl Acad Sci U S A. 2015 Jan 13;112(2):E127-36 - PubMed
  28. J Biomol NMR. 2015 Feb;61(2):161-71 - PubMed
  29. Science. 2008 Mar 14;319(5869):1523-6 - PubMed
  30. Nature. 2015 Mar 5;519(7541):114-7 - PubMed
  31. Proteins. 2005 Jun 1;59(4):687-96 - PubMed
  32. Nature. 2001 Sep 6;413(6851):39-44 - PubMed
  33. J Biomol NMR. 2012 Apr;52(4):315-27 - PubMed
  34. J Biomol NMR. 2013 Jul;56(3):227-41 - PubMed
  35. J Am Chem Soc. 2014 Sep 3;136(35):12489-97 - PubMed

Publication Types