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Sarangi BK, Minami Y, Thul ST. RNA-Seq analysis for indigo biosynthesis pathway genes in Indigofera tinctoria and Polygonum tinctorium. Genom Data. 2015;6:212-3doi: 10.1016/j.gdata.2015.09.021.
Sarangi, B. K., Minami, Y., & Thul, S. T. (2015). RNA-Seq analysis for indigo biosynthesis pathway genes in Indigofera tinctoria and Polygonum tinctorium. Genomics data, 6212-3. https://doi.org/10.1016/j.gdata.2015.09.021
Sarangi, Bijaya K, et al. "RNA-Seq analysis for indigo biosynthesis pathway genes in Indigofera tinctoria and Polygonum tinctorium." Genomics data vol. 6 (2015): 212-3. doi: https://doi.org/10.1016/j.gdata.2015.09.021
Sarangi BK, Minami Y, Thul ST. RNA-Seq analysis for indigo biosynthesis pathway genes in Indigofera tinctoria and Polygonum tinctorium. Genom Data. 2015 Oct 05;6:212-3. doi: 10.1016/j.gdata.2015.09.021. eCollection 2015 Dec. PMID: 26697377; PMCID: PMC4664758.
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Genom Data. 2015 Oct 05;6:212-3. doi: 10.1016/j.gdata.2015.09.021. eCollection 2015 Dec.

RNA-Seq analysis for indigo biosynthesis pathway genes in Indigofera tinctoria and Polygonum tinctorium.

Genomics data

Bijaya K Sarangi, Yoshiko Minami, Sanjog T Thul

Affiliations

  1. Environmental Biotechnology Division, CSIR, National Environmental Engineering Research Institute, Nehru Marg, Nagpur 440020, India.
  2. Department of Biochemistry, Okayama University of Science, Japan.

PMID: 26697377 PMCID: PMC4664758 DOI: 10.1016/j.gdata.2015.09.021

Abstract

Natural indigo is the most important blue dye for textile dyeing and valuable secondary metabolite biosynthesized in Indigofera tinctoria and Polygonum tinctorium plants. Present investigation is made to generation of gene resource for pathway enrichment and to understand possible gene expression involved in indigo biosynthesis. The data about raw reads and the transcriptome assembly project has been deposited at GenBank under the accessions SRA180766 and SRX692542 for I. tinctoria and P. tinctorium, respectively.

Keywords: Indican; Transcriptome dataset; Unigenes

References

  1. Plant Cell Physiol. 2000 Feb;41(2):218-25 - PubMed
  2. Bioinformatics. 2005 Sep 15;21(18):3674-6 - PubMed
  3. Nat Biotechnol. 2011 May 15;29(7):644-52 - PubMed

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