Display options
Share it on

Front Microbiol. 2015 Nov 10;6:1256. doi: 10.3389/fmicb.2015.01256. eCollection 2015.

Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes.

Frontiers in microbiology

Paulo V M Boratto, Thalita S Arantes, Lorena C F Silva, Felipe L Assis, Erna G Kroon, Bernard La Scola, Jônatas S Abrahão

Affiliations

  1. Laboratório de Vírus, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais Belo Horizonte, Brazil.
  2. URMITE CNRS UMR 6236 - IRD 3R198, Aix Marseille Université Marseille, France.

PMID: 26635738 PMCID: PMC4639698 DOI: 10.3389/fmicb.2015.01256

Abstract

It is well recognized that gene duplication/acquisition is a key factor for molecular evolution, being directly related to the emergence of new genetic variants. The importance of such phenomena can also be expanded to the viral world, with impacts on viral fitness and environmental adaptations. In this work we describe the isolation and characterization of Niemeyer virus, a new mimivirus isolate obtained from water samples of an urban lake in Brazil. Genomic data showed that Niemeyer harbors duplicated copies of three of its four aminoacyl-tRNA synthetase genes (cysteinyl, methionyl, and tyrosyl RS). Gene expression analysis showed that such duplications allowed significantly increased expression of methionyl and tyrosyl aaRS mRNA by Niemeyer in comparison to APMV. Remarkably, phylogenetic data revealed that Niemeyer duplicated gene pairs are different, each one clustering with a different group of mimivirus strains. Taken together, our results raise new questions about the origins and selective pressures involving events of aaRS gain and loss among mimiviruses.

Keywords: Mimiviridae; Niemeyer virus; aminoacyl-tRNA synthetase; gene duplication; giant virus isolation

References

  1. Science. 2003 Mar 28;299(5615):2033 - PubMed
  2. Genome Biol Evol. 2012;4(12):1324-30 - PubMed
  3. Science. 2004 Nov 19;306(5700):1344-50 - PubMed
  4. Mol Biol Evol. 2013 Aug;30(8):1916-28 - PubMed
  5. J Virol Methods. 2014 Oct;207:6-11 - PubMed
  6. J Virol. 2005 Nov;79(22):14095-101 - PubMed
  7. Virol J. 2014 May 14;11:95 - PubMed
  8. Nat Rev Mol Cell Biol. 2010 Sep;11(9):668-74 - PubMed
  9. Environ Microbiol. 2013 Jul;15(7):2000-7 - PubMed
  10. PLoS One. 2013 Apr 15;8(4):e61912 - PubMed
  11. Proc Natl Acad Sci U S A. 2011 Oct 18;108(42):17486-91 - PubMed
  12. Virol J. 2009 Dec 17;6:223 - PubMed
  13. Trends Microbiol. 2004 Oct;12(10):458-65 - PubMed
  14. Biol Direct. 2009 Dec 18;4:51 - PubMed
  15. Intervirology. 2010;53(5):344-53 - PubMed
  16. PLoS One. 2014 Feb 03;9(2):e87811 - PubMed
  17. Front Microbiol. 2015 Jun 01;6:539 - PubMed

Publication Types