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Biotechnol Rep (Amst). 2015 Sep;7:157-165. doi: 10.1016/j.btre.2015.07.001. Epub 2015 Aug 01.

Endovascular biopsy: Strategy for analyzing gene expression profiles of individual endothelial cells obtained from human vessels.

Biotechnology reports (Amsterdam, Netherlands)

Zhengda Sun, Devon A Lawson, Elizabeth Sinclair, Chih-Yang Wang, Ming-Derg Lai, Steven W Hetts, Randall T Higashida, Christopher F Dowd, Van V Halbach, Zena Werb, Hua Su, Daniel L Cooke

Affiliations

  1. Division of Neurointerventional Radiology, Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA, USA.
  2. Department of Anatomy, University of California, San Francisco, CA, USA.
  3. Division of Experimental Medicine, Department of Medicine, University of California, San Francisco, CA, USA.
  4. Department of Anatomy, University of California, San Francisco, CA, USA; Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
  5. Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
  6. Center for Cerebrovascular Research, Department of Anesthesia and Perioperative Care, University of California, San Francisco, CA, USA.

PMID: 26989654 PMCID: PMC4792280 DOI: 10.1016/j.btre.2015.07.001

Abstract

PURPOSE: To develop a strategy of achieving targeted collection of endothelial cells (ECs) by endovascular methods and analyzing the gene expression profiles of collected single ECs.

METHODS AND RESULTS: 134 ECs and 37 leukocytes were collected from four patients' intra-iliac artery endovascular guide wires by fluorescence activated cell sorting (FACS) and analyzed by single-cell quantitative RT-PCR for expression profile of 48 genes. Compared to CD45

CONCLUSION: Combination of endovascular device sampling, FACS and single-cell quantitative RT-PCR is a feasible method for analyzing EC gene expression profile in vascular lesions.

Keywords: Gene expression of artery endothelial cells; Single cell quantitative RT-PCR; Targeted endothelial cell sampling

References

  1. Arterioscler Thromb Vasc Biol. 2002 Sep 1;22(9):1445-50 - PubMed
  2. Circ Res. 1996 Oct;79(4):812-20 - PubMed
  3. Acta Diabetol. 2015 Feb;52(1):55-64 - PubMed
  4. J Appl Physiol (1985). 2007 Jan;102(1):63-71 - PubMed
  5. Circ Res. 1997 Jul;81(1):1-7 - PubMed
  6. Proc Natl Acad Sci U S A. 2006 Oct 17;103(42):15491-6 - PubMed
  7. Pediatr Res. 2005 Apr;57(4):537-44 - PubMed
  8. Circ Res. 2000 Jan 7-21;86(1):24-9 - PubMed
  9. Dev Cell. 2013 Jul 29;26(2):204-19 - PubMed
  10. J Biotechnol. 2014 Dec 20;192 Pt A:34-9 - PubMed
  11. J Appl Physiol (1985). 2007 Nov;103(5):1873-8 - PubMed
  12. Atherosclerosis. 1997 May;131(1):43-8 - PubMed
  13. Am J Hypertens. 2001 Jun;14(6 Pt 2):44S-54S - PubMed
  14. J Vasc Res. 2010;47(1):80-90 - PubMed
  15. Nat Cell Biol. 2012 Nov;14 (11):1139-47 - PubMed
  16. Inflamm Bowel Dis. 2006 Jan;12(1):16-21 - PubMed
  17. Arterioscler Thromb Vasc Biol. 2001 Dec;21(12):1941-7 - PubMed
  18. Circulation. 2005 Jan 4;111(1):58-62 - PubMed
  19. Biochem Biophys Res Commun. 2003 Aug 22;308(2):306-12 - PubMed
  20. J Physiol. 2007 Sep 1;583(Pt 2):753-66 - PubMed
  21. J Cell Sci. 2008 Nov 15;121(Pt 22):3683-92 - PubMed
  22. J Biol Chem. 2014 Feb 28;289(9):5357-70 - PubMed
  23. Diabetes Care. 2005 Feb;28(2):379-84 - PubMed
  24. Circ Res. 2001 Oct 12;89(8):709-15 - PubMed
  25. J Cell Sci. 2013 Mar 15;126(Pt 6):1392-405 - PubMed
  26. Mol Cell Biol Res Commun. 2000 Aug;4(2):117-21 - PubMed
  27. J Cell Biol. 2006 Oct 9;175(1):179-91 - PubMed
  28. J Clin Neurosci. 2011 Feb;18(2):165-70 - PubMed
  29. Am J Physiol Heart Circ Physiol. 2004 Dec;287(6):H2739-45 - PubMed
  30. Exp Mol Pathol. 2003 Aug;75(1):1-11 - PubMed
  31. Curr Opin Cardiol. 2005 Nov;20(6):547-51 - PubMed
  32. J Surg Res. 2013 Jul;183(1):478-86 - PubMed
  33. Angiogenesis. 2014 Jul;17(3):617-30 - PubMed
  34. J Lab Clin Med. 2001 Nov;138(5):322-31 - PubMed
  35. Cardiovasc Res. 2003 Aug 1;59(2):460-9 - PubMed
  36. J Biomech. 2003 May;36(5):631-43 - PubMed
  37. J Appl Physiol (1985). 2002 Mar;92(3):1331-8 - PubMed
  38. Circ Res. 2007 Jun 8;100(11):1659-66 - PubMed
  39. Circ Res. 2008 Dec 5;103(12 ):1383-92 - PubMed
  40. Radiology. 1999 Sep;212(3):655-64 - PubMed
  41. Arterioscler Thromb Vasc Biol. 2003 Sep 1;23(9):1535-40 - PubMed
  42. Am J Physiol Heart Circ Physiol. 2005 Sep;289(3):H1315-20 - PubMed
  43. Arterioscler Thromb Vasc Biol. 1998 Jun;18(6):894-901 - PubMed
  44. Circ Res. 2004 Feb 20;94(3):394-401 - PubMed
  45. Int J Cancer. 1996 May 29;66(5):664-8 - PubMed
  46. Circulation. 2007 Feb 6;115(5):627-37 - PubMed
  47. J Vasc Res. 2012;49(6):463-78 - PubMed
  48. Br J Pharmacol. 2000 Oct;131(4):804-10 - PubMed
  49. J Vasc Res. 2009;46(5):487-94 - PubMed
  50. Am J Physiol Heart Circ Physiol. 2007 Dec;293(6):H3636-42 - PubMed
  51. J Cereb Blood Flow Metab. 2012 Sep;32(9):1659-76 - PubMed
  52. Exp Cell Res. 2011 Sep 10;317(15):2073-85 - PubMed
  53. J Physiol. 2006 Mar 15;571(Pt 3):661-8 - PubMed
  54. Am J Physiol Cell Physiol. 2002 Oct;283(4):C1196-205 - PubMed
  55. Proc Natl Acad Sci U S A. 2011 Aug 23;108(34):13999-4004 - PubMed
  56. Am J Physiol Heart Circ Physiol. 2002 Feb;282(2):H585-93 - PubMed
  57. Physiol Genomics. 2005 Mar 21;21(1):124-30 - PubMed
  58. Biochem Biophys Res Commun. 2009 Nov 27;389(4):599-601 - PubMed
  59. J Cell Sci. 2003 Sep 1;116(Pt 17):3479-89 - PubMed
  60. Tissue Antigens. 1996 Nov;48(5):531-9 - PubMed
  61. PLoS One. 2008;3(12):e3964 - PubMed
  62. J Pharmacol Exp Ther. 2011 Jul;338(1):82-91 - PubMed
  63. J Am Soc Nephrol. 2004 Mar;15(3):566-74 - PubMed
  64. Cardiovasc Res. 2005 May 1;66(2):286-94 - PubMed
  65. Cardiovasc Pathol. 2010 Mar-Apr;19(2):e13-20 - PubMed
  66. J Histochem Cytochem. 2003 Sep;51(9):1119-30 - PubMed
  67. J Vasc Res. 2010;47(1):1-8 - PubMed
  68. Hiroshima J Med Sci. 1993 Jun;42(2):97-100 - PubMed
  69. Am J Physiol Heart Circ Physiol. 2013 Jun 15;304(12):H1585-97 - PubMed
  70. J Pathol. 2013 Aug;230(4):388-98 - PubMed
  71. Trends Mol Med. 2005 Mar;11(3):97-103 - PubMed
  72. Nat Protoc. 2012 Apr 05;7(5):829-38 - PubMed
  73. Mediators Inflamm. 2002 Feb;11(1):17-22 - PubMed
  74. J Gerontol A Biol Sci Med Sci. 2003 Sep;58(9):B798-805 - PubMed
  75. Circ Res. 2001 Oct 26;89(9):793-8 - PubMed
  76. Mediterr J Hematol Infect Dis. 2013 Sep 02;5(1):e2013060 - PubMed
  77. Exp Gerontol. 2003 Nov-Dec;38(11-12):1251-7 - PubMed

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