Display options
Share it on

J Am Chem Soc. 2017 Apr 12;139(14):5233-5241. doi: 10.1021/jacs.7b01624. Epub 2017 Mar 31.

Peptide Macrocyclization Inspired by Non-Ribosomal Imine Natural Products.

Journal of the American Chemical Society

Lara R Malins, Justine N deGruyter, Kevin J Robbins, Paul M Scola, Martin D Eastgate, M Reza Ghadiri, Phil S Baran

Affiliations

  1. Department of Chemistry, The Scripps Research Institute , 10550 North Torrey Pines Road, La Jolla, California 92037, United States.
  2. Department of Discovery Chemistry, Bristol-Myers Squibb Research and Development , 5 Research Parkway, Wallingford, Connecticut 06492, United States.
  3. Chemical Development, Bristol-Myers Squibb , One Squibb Drive, New Brunswick, New Jersey 08903, United States.

PMID: 28326777 PMCID: PMC5391502 DOI: 10.1021/jacs.7b01624

Abstract

A thermodynamic approach to peptide macrocyclization inspired by the cyclization of non-ribosomal peptide aldehydes is presented. The method provides access to structurally diverse macrocycles by exploiting the reactivity of transient macrocyclic peptide imines toward inter- and intramolecular nucleophiles. Reactions are performed in aqueous media, in the absence of side chain protecting groups, and are tolerant of all proteinogenic functional groups. Macrocyclic products bearing non-native and rigidifying structural motifs, isotopic labels, and a variety of bioorthogonal handles are prepared, along with analogues of four distinct natural products. Structural interrogation of the linear and macrocyclic peptides using variable-temperature NMR and circular dichroism suggests that preorganization of linear substrates is not a prerequisite for macrocyclization.

References

  1. J Am Chem Soc. 2010 Mar 10;132(9):2889-91 - PubMed
  2. J Am Chem Soc. 2006 Dec 27;128(51):16478-9 - PubMed
  3. J Am Chem Soc. 2016 Feb 24;138(7):2098-101 - PubMed
  4. Chem Sci. 2015 Jan 1;6(1):30-49 - PubMed
  5. Chem Biol Drug Des. 2013 Jan;81(1):136-47 - PubMed
  6. Angew Chem Int Ed Engl. 2017 Jan 2;56(1):314-318 - PubMed
  7. Biopolymers. 2000;55(2):165-86 - PubMed
  8. J Am Chem Soc. 2015 Apr 1;137(12):4034-7 - PubMed
  9. Chem Sci. 2015 Aug 1;6(8):4889-4896 - PubMed
  10. Nat Chem. 2016 Dec;8(12):1105-1111 - PubMed
  11. Org Lett. 2014 Mar 7;16(5):1502-5 - PubMed
  12. J Am Chem Soc. 2013 Apr 24;135(16):5946-9 - PubMed
  13. Nat Chem. 2009 Jun;1(3):193-205 - PubMed
  14. AAPS J. 2015 Jan;17(1):134-43 - PubMed
  15. Angew Chem Int Ed Engl. 2016 Oct 4;55(41):12659-63 - PubMed
  16. Trends Cell Biol. 1998 Oct;8(10):397-403 - PubMed
  17. Chembiochem. 2010 Jul 26;11(11):1594-9 - PubMed
  18. Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):E3753-60 - PubMed
  19. Org Biomol Chem. 2010 Feb 7;8(3):559-63 - PubMed
  20. Biopolymers. 2003;71(4):454-77 - PubMed
  21. J Org Chem. 1996 Dec 13;61(25):8831-8838 - PubMed
  22. J Bacteriol. 2003 Dec;185(24):7036-43 - PubMed
  23. Nat Commun. 2015 May 21;6:7160 - PubMed
  24. Org Lett. 2005 Sep 29;7(20):4503-6 - PubMed
  25. J Nat Prod. 2009 Apr;72(4):732-8 - PubMed
  26. Chem Soc Rev. 2015 Jan 7;44(1):91-102 - PubMed
  27. Chembiochem. 2008 Nov 3;9(16):2597-601 - PubMed
  28. Nat Chem. 2011 Jun 23;3(7):509-24 - PubMed
  29. Acc Chem Res. 2015 Mar 17;48(3):712-21 - PubMed
  30. J Am Chem Soc. 2005 Oct 5;127(39):13490-1 - PubMed
  31. Angew Chem Int Ed Engl. 2017 May 22;56(22):6284-6288 - PubMed
  32. J Pept Sci. 2007 Jan;13(1):1-15 - PubMed
  33. Chem Commun (Camb). 2010 Jun 21;46(23):4061-3 - PubMed
  34. Gene. 2004 Jan 21;325:35-42 - PubMed
  35. Bioconjug Chem. 2013 May 15;24(5):735-65 - PubMed
  36. Angew Chem Int Ed Engl. 2015 Jul 27;54(31):8896-927 - PubMed
  37. J Pept Res. 1997 Jan;49(1):67-73 - PubMed
  38. Chem Commun (Camb). 2003 Feb 7;(3):297-307 - PubMed
  39. J Nat Prod. 2010 Nov 29;73(11):1927-32 - PubMed
  40. Science. 1994 Nov 4;266(5186):776-9 - PubMed
  41. Org Lett. 2012 Nov 16;14(22):5720-3 - PubMed
  42. Nature. 2016 Jul 27;535(7613):511-6 - PubMed
  43. J Am Chem Soc. 2002 Nov 6;124(44):12969-71 - PubMed
  44. Bioorg Med Chem Lett. 2016 Feb 1;26(3):707-713 - PubMed
  45. Org Lett. 2007 Nov 22;9(24):5011-4 - PubMed
  46. Org Lett. 2011 May 20;13(10):2754-7 - PubMed
  47. J Am Chem Soc. 2016 Jul 13;138(27):8340-3 - PubMed
  48. Nat Rev Drug Discov. 2016 Aug;15(8):533-50 - PubMed
  49. Org Lett. 2003 Mar 6;5(5):737-40 - PubMed
  50. Angew Chem Int Ed Engl. 2015 Jul 20;54(30):8665-8 - PubMed
  51. J Am Chem Soc. 2011 May 18;133(19):7316-9 - PubMed
  52. Curr Med Chem. 2002 May;9(9):963-78 - PubMed
  53. J Med Chem. 2003 Jul 17;46(15):3308-13 - PubMed

Publication Types

Grant support