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J Am Stat Assoc. 2016;111(515):1075-1095. doi: 10.1080/01621459.2016.1164052. Epub 2016 Oct 18.

Hierarchical models for semi-competing risks data with application to quality of end-of-life care for pancreatic cancer.

Journal of the American Statistical Association

Kyu Ha Lee, Francesca Dominici, Deborah Schrag, Sebastien Haneuse

Affiliations

  1. Epidemiology and Biostatistics Core, The Forsyth Institute, Department of Oral Health Policy and Epidemiology, Harvard School of Dental Medicine.
  2. Department of Biostatistics, Harvard T.H. Chan School of Public Health.
  3. Department of Medical Oncology, Dana Farber Cancer Institute.

PMID: 28303074 PMCID: PMC5347153 DOI: 10.1080/01621459.2016.1164052

Abstract

Readmission following discharge from an initial hospitalization is a key marker of quality of health care in the United States. For the most part, readmission has been studied among patients with 'acute' health conditions, such as pneumonia and heart failure, with analyses based on a logistic-Normal generalized linear mixed model (Normand et al., 1997). Naïve application of this model to the study of readmission among patients with 'advanced' health conditions such as pancreatic cancer, however, is problematic because it ignores death as a competing risk. A more appropriate analysis is to imbed such a study within the semi-competing risks framework. To our knowledge, however, no comprehensive statistical methods have been developed for cluster-correlated semi-competing risks data. To resolve this gap in the literature we propose a novel hierarchical modeling framework for the analysis of cluster-correlated semi-competing risks data that permits parametric or non-parametric specifications for a range of components giving analysts substantial flexibility as they consider their own analyses. Estimation and inference is performed within the Bayesian paradigm since it facilitates the straightforward characterization of (posterior) uncertainty for all model parameters, including hospital-specific random effects. Model comparison and choice is performed via the deviance information criterion and the log-pseudo marginal likelihood statistic, both of which are based on a partially marginalized likelihood. An efficient computational scheme, based on the Metropolis-Hastings-Green algorithm, is developed and had been implemented in the SemiCompRisks R package. A comprehensive simulation study shows that the proposed framework performs very well in a range of data scenarios, and outperforms competitor analysis strategies. The proposed framework is motivated by and illustrated with an on-going study of the risk of readmission among Medicare beneficiaries diagnosed with pancreatic cancer. Using data on n=5,298 patients at

Keywords: Bayesian survival analysis; cluster-correlated data; illness-death models; reversible jump Markov chain Monte Carlo; semi-competing risks; shared frailty

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