Display options
Share it on

Biophys Physicobiol. 2016 Dec 13;13:311-319. doi: 10.2142/biophysico.13.0_311. eCollection 2016.

Theoretical analyses on a flipping mechanism of UV-induced DNA damage.

Biophysics and physicobiology

Ryuma Sato, Ryuhei Harada, Yasuteru Shigeta

Affiliations

  1. Center for Computational Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8577, Japan.

PMID: 28409083 PMCID: PMC5283176 DOI: 10.2142/biophysico.13.0_311

Abstract

As for UV-induced DNA damage, which may induce skin cancer in animals and growth inhibition in plants, there are two types of photoproducts, namely

Keywords: Parallel Cascade Selection-MD; base flipping; fragment molecular orbital; interaction energy

Conflict of interest statement

Conflict of Interest All the authors declare that they have no conflict of interest.

References

  1. J Biol Chem. 1999 Mar 12;274(11):6957-62 - PubMed
  2. J Chem Phys. 2013 Jul 21;139(3):035103 - PubMed
  3. Angew Chem Int Ed Engl. 2008;47(52):10076-80 - PubMed
  4. EMBO J. 2011 Sep 02;30(21):4437-49 - PubMed
  5. Science. 2004 Dec 3;306(5702):1789-93 - PubMed
  6. J Phys Chem B. 2007 Oct 11;111(40):11843-9 - PubMed
  7. Science. 1983 Aug 19;221(4612):709-13 - PubMed
  8. Protein Sci. 2005 Mar;14(3):711-8 - PubMed
  9. J Phys Chem B. 2008 Apr 3;112(13):4113-22 - PubMed
  10. Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):14831-6 - PubMed
  11. Chem Rev. 2003 Jun;103(6):2203-37 - PubMed
  12. Bioinformatics. 2004 May 22;20(8):1329-30 - PubMed
  13. Proc Natl Acad Sci U S A. 2005 Nov 8;102(45):16128-32 - PubMed
  14. Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17696-700 - PubMed
  15. Cell Mol Life Sci. 2006 Jun;63(11):1266-77 - PubMed
  16. Chem Res Toxicol. 2000 Jul;13(7):541-9 - PubMed
  17. J Struct Funct Genomics. 2002;2(1):9-22 - PubMed
  18. Photochem Photobiol. 2005 Nov-Dec;81(6):1291-304 - PubMed
  19. J Mol Biol. 2000 Jun 9;299(3):681-93 - PubMed
  20. Annu Rev Biochem. 1996;65:43-81 - PubMed
  21. Protein Sci. 2003 Aug;12(8):1621-32 - PubMed
  22. Mol Cell. 2003 Jan;11(1):59-67 - PubMed
  23. J Chem Theory Comput. 2012 Jan 10;8(1):75-9 - PubMed
  24. Proc Natl Acad Sci U S A. 1991 Nov 15;88(22):10124-8 - PubMed
  25. Genome Biol. 2005;6(5):220 - PubMed
  26. J Photochem Photobiol B. 2001 Dec 31;65(2-3):101-4 - PubMed
  27. Photochem Photobiol Sci. 2002 Apr;1(4):225-36 - PubMed
  28. Photochem Photobiol. 2014 Jan;90(1):1-14 - PubMed

Publication Types