Display options
Cite
Dinleyici EC, Martínez-Martínez D, Kara A, et al. Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment. Front Microbiol. 2018;9:1230doi: 10.3389/fmicb.2018.01230.
Dinleyici, E. C., Martínez-Martínez, D., Kara, A., Karbuz, A., Dalgic, N., Metin, O., Yazar, A. S., Guven, S., Kurugol, Z., Turel, O., Kucukkoc, M., Yasa, O., Eren, M., Ozen, M., Martí, J. M., P Garay, C., Vandenplas, Y., & Moya, A. (2018). Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment. Frontiers in microbiology, 91230. https://doi.org/10.3389/fmicb.2018.01230
Dinleyici, Ener C, et al. "Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment." Frontiers in microbiology vol. 9 (2018): 1230. doi: https://doi.org/10.3389/fmicb.2018.01230
Dinleyici EC, Martínez-Martínez D, Kara A, Karbuz A, Dalgic N, Metin O, Yazar AS, Guven S, Kurugol Z, Turel O, Kucukkoc M, Yasa O, Eren M, Ozen M, Martí JM, P Garay C, Vandenplas Y, Moya A. Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment. Front Microbiol. 2018 Jun 12;9:1230. doi: 10.3389/fmicb.2018.01230. eCollection 2018. PMID: 29946306; PMCID: PMC6005867.
Copy Download .nbib Format: NLM
Share it on

Front Microbiol. 2018 Jun 12;9:1230. doi: 10.3389/fmicb.2018.01230. eCollection 2018.

Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment.

Frontiers in microbiology

Ener C Dinleyici, Daniel Martínez-Martínez, Ates Kara, Adem Karbuz, Nazan Dalgic, Ozge Metin, Ahmet S Yazar, Sirin Guven, Zafer Kurugol, Ozden Turel, Mehmet Kucukkoc, Olcay Yasa, Makbule Eren, Metehan Ozen, Jose Manuel Martí, Carlos P Garay, Yvan Vandenplas, Andrés Moya

Affiliations

  1. Department of Pediatrics, Faculty of Medicine, Eskisehir Osmangazi University, Eskisehir, Turkey.
  2. Institute for Integrative Systems Biology, Catedrático José Beltrán, Valencia, Spain.
  3. Pediatric Infectious Disease Unit, Faculty of Medicine, Hacettepe University, Ankara, Turkey.
  4. Department of Pediatrics, Okmeydani Education and Research Hospital, Istanbul, Turkey.
  5. Division of Pediatric Infectious Diseases, Sisli Etfal Training and Research Hospital, Istanbul, Turkey.
  6. Division of Pediatric Infectious Diseases, Konya Training and Research Hospital, Konya, Turkey.
  7. Department of Pediatrics, Umraniye Education and Research Hospital, Istanbul, Turkey.
  8. Department of Pediatrics, Faculty of Medicine, Ege University, Izmir, Turkey.
  9. Department of Pediatric Infectious Disease Unit, Faculty of Medicine, Bezmialem Vakif University, Istanbul, Turkey.
  10. Department of Pediatrics, Goztepe Training and Research Hospital, SB Istanbul Medeniyet University, Istanbul, Turkey.
  11. Department of Pediatrics, Acibadem University Faculty of Medicine, Istanbul, Turkey.
  12. Department of Pediatrics, UZ Brussel, Vrije Universiteit Brussel, Brussels, Belgium.
  13. Area de Genómica y Salud, Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana (FISABIO-Salud Pública), Valencia, Spain.
  14. CIBER en Epidemiología y Salud Pública (CIBEResp), Madrid, Spain.

PMID: 29946306 PMCID: PMC6005867 DOI: 10.3389/fmicb.2018.01230

Abstract

Gut microbiota is closely related to acute infectious diarrhea, one of the leading causes of mortality and morbidity in children worldwide. Understanding the dynamics of the recovery from this disease is of clinical interest. This work aims to correlate the dynamics of gut microbiota with the evolution of children who were suffering from acute infectious diarrhea caused by a rotavirus, and their recovery after the administration of a probiotic,

Keywords: acute infectious diarrhea; microbiota; rotavirus; systems biology; temporal analysis

References

  1. Genome Biol. 2011 Jun 24;12(6):R60 - PubMed
  2. Cell. 2014 Nov 6;159(4):789-99 - PubMed
  3. Virology. 2009 Sep 1;391(2):325-33 - PubMed
  4. J Virol. 2004 Oct;78(19):10213-20 - PubMed
  5. Genome Biol. 2012 Apr 16;13(9):R79 - PubMed
  6. Mucosal Immunol. 2015 Jul;8(4):760-72 - PubMed
  7. Nucleic Acids Res. 2000 Jan 1;28(1):27-30 - PubMed
  8. Gut Pathog. 2013 Feb 01;5(1):1 - PubMed
  9. ISME J. 2013 Apr;7(4):781-90 - PubMed
  10. Nature. 2017 Aug 2;548(7665):43-51 - PubMed
  11. Clin Infect Dis. 2016 May 1;62 Suppl 2:S96-S105 - PubMed
  12. Sci Rep. 2016 May 18;6:26192 - PubMed
  13. Nat Rev Gastroenterol Hepatol. 2010 Sep;7(9):503-14 - PubMed
  14. Lancet. 2013 Jul 20;382(9888):209-22 - PubMed
  15. Nature. 2012 May 09;486(7402):222-7 - PubMed
  16. Sci Rep. 2017 Apr 11;7:46130 - PubMed
  17. J Pediatr Gastroenterol Nutr. 2014 Jul;59(1):132-52 - PubMed
  18. Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4586-91 - PubMed
  19. Arzneimittelforschung. 1971 Dec;21(12):1907-77 - PubMed
  20. Expert Opin Biol Ther. 2014 Nov;14(11):1593-609 - PubMed
  21. Gut Microbes. 2018 Jan 2;9(1):38-54 - PubMed
  22. Trends Microbiol. 2016 May;24(5):402-413 - PubMed
  23. Genome Biol. 2014 Jun 27;15(6):R76 - PubMed
  24. Gut. 2012 Jul;61(7):997-1006 - PubMed
  25. Gut. 2017 May;66(5):813-822 - PubMed
  26. Nature. 2014 Jun 19;510(7505):417-21 - PubMed
  27. Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4554-61 - PubMed
  28. Nucleic Acids Res. 2016 Jan 4;44(D1):D457-62 - PubMed
  29. Nat Methods. 2010 May;7(5):335-6 - PubMed
  30. Benef Microbes. 2015;6(4):415-21 - PubMed
  31. MBio. 2015 May 19;6(3):e00381-15 - PubMed
  32. Environ Microbiol. 2013 Jan;15(1):211-26 - PubMed
  33. Bioinformatics. 2011 Mar 15;27(6):863-4 - PubMed
  34. Nature. 2014 Jan 23;505(7484):559-63 - PubMed
  35. FEMS Microbiol Ecol. 2013 Dec;86(3):581-9 - PubMed
  36. Nat Biotechnol. 2013 Sep;31(9):814-21 - PubMed
  37. Nature. 2012 Sep 13;489(7415):220-30 - PubMed
  38. Gastroenterology. 2006 May;130(6):1588-94 - PubMed
  39. Science. 2012 Jun 8;336(6086):1255-62 - PubMed
  40. Nucleic Acids Res. 2017 Jan 4;45(D1):D353-D361 - PubMed
  41. mSystems. 2017 Mar 21;2(2): - PubMed
  42. FEMS Microbiol Ecol. 2009 Nov;70(2):21-9 - PubMed
  43. Microbiome. 2016 Dec 30;4(1):69 - PubMed
  44. ISME J. 2007 May;1(1):56-66 - PubMed
  45. Science. 2016 Apr 29;352(6285):560-4 - PubMed
  46. Microb Ecol Health Dis. 2015 Feb 02;26:26050 - PubMed
  47. Acta Paediatr. 2014 Jul;103(7):e300-5 - PubMed
  48. Ecology. 2007 Oct;88(10):2427-39 - PubMed
  49. Nature. 2009 Jan 22;457(7228):480-4 - PubMed
  50. Expert Opin Biol Ther. 2012 Apr;12(4):395-410 - PubMed

Publication Types