Display options
Share it on

Front Microbiol. 2018 Aug 27;9:2012. doi: 10.3389/fmicb.2018.02012. eCollection 2018.

Genome Sequencing Reveals a Large and Diverse Repertoire of Antimicrobial Peptides.

Frontiers in microbiology

Reza Rezaei Javan, Andries J van Tonder, James P King, Caroline L Harrold, Angela B Brueggemann

Affiliations

  1. Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
  2. Department of Medicine, Imperial College London, London, United Kingdom.

PMID: 30210481 PMCID: PMC6120550 DOI: 10.3389/fmicb.2018.02012

Abstract

Competition among bacterial members of the same ecological niche is mediated by bacteriocins: antimicrobial peptides produced by bacterial species to kill other bacteria. Bacteriocins are also promising candidates for novel antimicrobials.

Keywords: antimicrobials; bacteriocins; genomics; pneumococcus; population biology

References

  1. Pediatrics. 2005 Sep;116(3):e408-13 - PubMed
  2. Mol Microbiol. 2017 Aug;105(4):554-571 - PubMed
  3. Bioinformatics. 2015 Nov 15;31(22):3691-3 - PubMed
  4. PLoS One. 2010 Mar 10;5(3):e9490 - PubMed
  5. Sci Rep. 2017 Feb 20;7:42976 - PubMed
  6. Nat Methods. 2012 Mar 04;9(4):357-9 - PubMed
  7. Nat Genet. 2012 Jan 29;44(3):352-5 - PubMed
  8. J Antimicrob Chemother. 2002 Dec;50 Suppl S2:59-73 - PubMed
  9. Bioinformatics. 2014 Jul 15;30(14):2068-9 - PubMed
  10. Microbiology. 2016 Mar;162(3):476-86 - PubMed
  11. BMC Genomics. 2014 Nov 18;15:983 - PubMed
  12. PLoS Genet. 2013;9(10):e1003868 - PubMed
  13. MBio. 2015 Jun 16;6(3):e00173 - PubMed
  14. BMC Bioinformatics. 2010 Dec 10;11:595 - PubMed
  15. Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8710-5 - PubMed
  16. Nucleic Acids Res. 2015 Jan;43(Database issue):D447-52 - PubMed
  17. Genome Res. 2008 May;18(5):821-9 - PubMed
  18. Genome Biol. 2010;11(10):R106 - PubMed
  19. Nat Prod Rep. 2013 Jan;30(1):108-60 - PubMed
  20. BMC Microbiol. 2010 Jan 27;10:22 - PubMed
  21. MBio. 2011 Sep 06;2(5):null - PubMed
  22. MBio. 2016 Jan 26;7(1):e01656-15 - PubMed
  23. Bioinformatics. 2014 May 1;30(9):1236-40 - PubMed
  24. Lancet Infect Dis. 2004 Mar;4(3):144-54 - PubMed
  25. J Bacteriol. 2010 Apr;192(8):2068-76 - PubMed
  26. Mol Microbiol. 1991 Aug;5(8):1993-2002 - PubMed
  27. Trends Microbiol. 2013 Mar;21(3):129-35 - PubMed
  28. BMC Genomics. 2015 Jul 28;16:554 - PubMed
  29. Infect Immun. 2007 Jan;75(1):443-51 - PubMed
  30. Vaccine. 2015 Apr 21;33(17):2015-21 - PubMed
  31. Front Microbiol. 2016 May 20;7:706 - PubMed
  32. Antimicrob Agents Chemother. 2001 Jun;45(6):1721-9 - PubMed
  33. Lancet Infect Dis. 2016 Feb;16(2):239-51 - PubMed
  34. Vaccine. 2010 Jul 19;28(32):5167-73 - PubMed
  35. J Infect Dis. 2013 Feb 1;207(3):439-49 - PubMed
  36. Philos Trans R Soc Lond B Biol Sci. 2009 Nov 12;364(1533):3157-68 - PubMed
  37. Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43 - PubMed
  38. J Infect Dis. 2018 Mar 5;217(6):988-999 - PubMed
  39. PLoS One. 2012;7(3):e33320 - PubMed
  40. J Infect Dis. 2003 May 1;187(9):1424-32 - PubMed
  41. Clin Microbiol Rev. 1990 Apr;3(2):171-96 - PubMed
  42. Bioinformatics. 2015 Aug 1;31(15):2443-51 - PubMed
  43. Am J Epidemiol. 2010 Jan 15;171(2):169-76 - PubMed
  44. Mol Microbiol. 2015 Jul;97(2):229-43 - PubMed
  45. Mob Genet Elements. 2013 Jul 1;3(4):e25582 - PubMed
  46. PLoS Comput Biol. 2014 Aug 21;10(8):e1003788 - PubMed
  47. Mol Microbiol. 1991 Sep;5(9):2255-60 - PubMed
  48. FEMS Microbiol Lett. 2000 Sep 15;190(2):231-6 - PubMed
  49. Microbiology. 1999 Nov;145 ( Pt 11):3155-61 - PubMed
  50. Nat Genet. 2014 Mar;46(3):305-309 - PubMed
  51. PLoS Comput Biol. 2015 Feb 12;11(2):e1004041 - PubMed
  52. J Clin Microbiol. 2015 Jul;53(7):2271-85 - PubMed
  53. Nucleic Acids Res. 2011 Jan;39(Database issue):D225-9 - PubMed
  54. BMC Infect Dis. 2017 Sep 11;17(1):616 - PubMed
  55. PLoS Pathog. 2017 May 18;13(5):e1006339 - PubMed
  56. J Bacteriol. 2009 Mar;191(5):1480-9 - PubMed
  57. Bioinformatics. 2005 Aug 15;21(16):3422-3 - PubMed
  58. Appl Environ Microbiol. 2009 Sep;75(17):5451-60 - PubMed
  59. Science. 2011 Jan 28;331(6016):430-4 - PubMed
  60. Lancet. 2009 Sep 12;374(9693):893-902 - PubMed
  61. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W448-53 - PubMed
  62. Bioinformatics. 2007 Nov 1;23(21):2947-8 - PubMed
  63. Nat Genet. 2013 Jun;45(6):656-63 - PubMed
  64. Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5 - PubMed
  65. Nature. 1991 Jan 3;349(6304):29-31 - PubMed
  66. Pediatrics. 2010 Mar;125(3):429-36 - PubMed

Publication Types