Display options
Share it on

Front Microbiol. 2020 Mar 04;11:205. doi: 10.3389/fmicb.2020.00205. eCollection 2020.

Metagenomic Analysis of Plant Viruses Associated With Papaya Ringspot Disease in .

Frontiers in microbiology

Naomi Nzilani Mumo, George Edward Mamati, Elijah Miinda Ateka, Fredah K Rimberia, George Ochieng' Asudi, Laura M Boykin, Eunice M Machuka, Joyce Njoki Njuguna, Roger Pelle, Francesca Stomeo

Affiliations

  1. Department of Horticulture and Food Security, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
  2. Department of Biochemistry, Microbiology and Biotechnology, Kenyatta University, Nairobi, Kenya.
  3. Department of Plant Physiology, Faculty of Bioscience, Matthias-Schleiden-Institute, Friedrich Schiller University Jena, Jena, Germany.
  4. ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, WA, Australia.
  5. Biosciences Eastern and Central Africa-International Livestock Research Institute Hub, Nairobi, Kenya.

PMID: 32194518 PMCID: PMC7064807 DOI: 10.3389/fmicb.2020.00205

[No abstract available.]

Copyright © 2020 Mumo, Mamati, Ateka, Rimberia, Asudi, Boykin, Machuka, Njuguna, Pelle and Stomeo.

Keywords: Carlavirus; Potyvirus; diagnostic primers; next-generation sequencing; papaya; ringspot disease

References

  1. AIDS Res Hum Retroviruses. 2005 Jan;21(1):98-102 - PubMed
  2. Plant Dis. 2001 May;85(5):547-552 - PubMed
  3. Virology. 2015 May;479-480:167-79 - PubMed
  4. Bioinformatics. 2000 Jun;16(6):562-3 - PubMed
  5. Phytopathology. 2016 Aug;106(8):937-44 - PubMed
  6. J Gen Virol. 1998 Dec;79 ( Pt 12):3119-22 - PubMed
  7. J Gen Virol. 2011 Aug;92(Pt 8):1939-1948 - PubMed
  8. Virology. 1996 Dec 1;226(1):146-51 - PubMed
  9. PLoS One. 2014 Jul 25;9(7):e102945 - PubMed
  10. Proc Natl Acad Sci U S A. 2001 Nov 20;98(24):13757-62 - PubMed
  11. Arch Virol. 1998;143(4):769-80 - PubMed
  12. Food Nutr Bull. 2005 Dec;26(4):422-6 - PubMed
  13. Virology. 1995 Feb 20;207(1):127-35 - PubMed
  14. Arch Virol. 2019 Jun;164(6):1717-1721 - PubMed
  15. Nucleic Acids Res. 2012 Jan;40(Database issue):D48-53 - PubMed
  16. Plant Dis. 2006 Aug;90(8):1004-1011 - PubMed
  17. Arch Virol. 2008;153(1):117-25 - PubMed
  18. PLoS One. 2016 Mar 17;11(3):e0151549 - PubMed
  19. Virus Genes. 2016 Dec;52(6):896-899 - PubMed
  20. Nucleic Acids Res. 2011 Jan;39(Database issue):D225-9 - PubMed
  21. Bioinformatics. 2014 Aug 1;30(15):2114-20 - PubMed
  22. Virology. 1999 Dec 20;265(2):218-25 - PubMed
  23. Mol Plant Pathol. 2008 May;9(3):269-80 - PubMed
  24. Arch Virol. 1989;106(3-4):171-200 - PubMed
  25. Virol J. 2016 Nov 4;13(1):181 - PubMed
  26. J Gen Virol. 1991 Sep;72 ( Pt 9):2197-206 - PubMed
  27. Virus Evol. 2015 May 26;1(1):vev003 - PubMed
  28. Virus Res. 2017 Jul 15;239:82-86 - PubMed
  29. J Clin Microbiol. 2010 Dec;48(12):4392-6 - PubMed
  30. J Gen Virol. 1994 Jun;75 ( Pt 6):1407-14 - PubMed
  31. J Gen Virol. 1995 Feb;76 ( Pt 2):265-70 - PubMed
  32. Int Microbiol. 2003 Dec;6(4):225-32 - PubMed
  33. Nature. 2008 Apr 24;452(7190):991-6 - PubMed
  34. Arch Virol. 2005 Mar;150(3):459-79 - PubMed
  35. Virology. 2015 May;479-480:271-7 - PubMed
  36. Genetics. 2007 Jun;176(2):1035-47 - PubMed
  37. Methods Mol Biol. 2007;354:197-240 - PubMed
  38. Genome Res. 2017 May;27(5):824-834 - PubMed
  39. BMC Genomics. 2017 Jun 8;18(1):453 - PubMed
  40. PLoS One. 2015 Jun 18;10(6):e0129469 - PubMed
  41. J Gen Virol. 2002 Jun;83(Pt 6):1511-1521 - PubMed
  42. Nucleic Acids Res. 1989 Nov 11;17(21):8413-40 - PubMed
  43. BMC Bioinformatics. 2012 Jun 18;13:134 - PubMed
  44. Mol Biol Evol. 2013 Dec;30(12):2725-9 - PubMed
  45. Nat Methods. 2012 Mar 04;9(4):357-9 - PubMed
  46. BMC Bioinformatics. 2011 Sep 30;12:385 - PubMed
  47. Annu Rev Phytopathol. 1998;36:415-37 - PubMed
  48. Phytopathology. 2000 May;90(5):467-73 - PubMed
  49. J Gen Virol. 1992 Aug;73 ( Pt 8):2129-34 - PubMed
  50. Arch Virol. 2004 Dec;149(12):2435-42 - PubMed
  51. Arch Virol. 2011 Dec;156(12):2309-11 - PubMed
  52. Plant Pathol J. 2015 Dec;31(4):388-401 - PubMed
  53. Bioinformatics. 2000 Jul;16(7):573-82 - PubMed
  54. BMC Bioinformatics. 2009 Dec 15;10:421 - PubMed
  55. Mol Plant Pathol. 2012 Feb;13(2):204-16 - PubMed
  56. J Mol Evol. 1992 Feb;34(2):126-9 - PubMed
  57. Annu Rev Phytopathol. 2007;45:73-100 - PubMed
  58. Comput Appl Biosci. 1992 Jun;8(3):275-82 - PubMed

Publication Types