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Proteomes. 2020 Mar 10;8(1). doi: 10.3390/proteomes8010005.

Targeting a Subset of the Membrane Proteome for Top-Down Mass Spectrometry: Introducing the Proteolipidome.

Proteomes

Julian Whitelegge

Affiliations

  1. The Pasarow Mass Spectrometry Laboratory, Jane and Terry Semel Institute of Neuroscience and Human Behavior, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095 USA.

PMID: 32164246 PMCID: PMC7151669 DOI: 10.3390/proteomes8010005

Abstract

A subsection of integral membrane proteins partition into chloroform during a chloroform/methanol/water extraction primarily designed to extract lipids. Traditionally, these proteins were called proteolipids due to their lipid-like properties; the c-subunit of the ATP synthase integral FO component is the best known due to its abundance. In this manuscript, we investigate purification of proteolipid proteins away from lipids for high-resolution mass spectrometry. Size-exclusion chromatography on silica beads using a chloroform/methanol/aqueous formic acid (4/4/1;

Keywords: CAD; FTICR; aiECD; high-resolution mass spectrometry; proteoform

References

  1. Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):2814-2820 - PubMed
  2. Can J Biochem Physiol. 1959 Aug;37(8):911-7 - PubMed
  3. Mol Cell Proteomics. 2002 Oct;1(10):816-27 - PubMed
  4. Anal Biochem. 1984 Apr;138(1):141-3 - PubMed
  5. Eur J Biochem. 1992 Aug 1;207(3):1077-84 - PubMed
  6. J Biol Chem. 1957 May;226(1):497-509 - PubMed
  7. Anal Chem. 2013 Mar 5;85(5):2558-68 - PubMed
  8. Science. 1972 Feb 18;175(4023):720-31 - PubMed
  9. Proteomics. 2004 Jan;4(1):31-45 - PubMed
  10. Science. 2019 Nov 8;366(6466): - PubMed
  11. Nat Biotechnol. 2003 May;21(5):532-8 - PubMed
  12. Mol Cell Proteomics. 2006 Mar;5(3):444-53 - PubMed
  13. Biochemistry. 2000 Apr 18;39(15):4237-42 - PubMed
  14. Proteomes. 2015 Dec 03;3(4):440-453 - PubMed
  15. J Biol Chem. 2003 Jul 4;278(27):24251-4 - PubMed
  16. Proc Natl Acad Sci U S A. 1999 Sep 14;96(19):10695-8 - PubMed
  17. Mol Cell Proteomics. 2002 Jan;1(1):46-59 - PubMed
  18. Science. 2018 Nov 16;362(6416):829-834 - PubMed
  19. Anal Chem. 2007 Jun 15;79(12):4613-20 - PubMed
  20. FEBS Lett. 1976 Jun 15;65(3):391-5 - PubMed
  21. Proteomics. 2010 Oct;10(20):3644-56 - PubMed
  22. Biochemistry. 1993 Nov 16;32(45):12167-77 - PubMed
  23. Plant Physiol Biochem. 2004 Dec;42(12):919-27 - PubMed
  24. Protein Sci. 1998 Jun;7(6):1423-30 - PubMed
  25. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11564-6 - PubMed
  26. Electrophoresis. 2000 Apr;21(6):1054-70 - PubMed
  27. J Proteome Res. 2007 Jun;6(6):2205-10 - PubMed
  28. Nature. 2014 Jun 5;510(7503):172-175 - PubMed
  29. J Proteomics. 2018 Mar 20;175:3-4 - PubMed
  30. Bull Soc Chim Biol (Paris). 1953;35(5-6):419-22 - PubMed

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