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Front Microbiol. 2020 Apr 17;11:659. doi: 10.3389/fmicb.2020.00659. eCollection 2020.

Identification of Complex Rumen Microbiome Interaction Within Diverse Functional Niches as Mechanisms Affecting the Variation of Methane Emissions in Bovine.

Frontiers in microbiology

Marina Martínez-Álvaro, Marc D Auffret, Robert D Stewart, Richard J Dewhurst, Carol-Anne Duthie, John A Rooke, R John Wallace, Barbara Shih, Tom C Freeman, Mick Watson, Rainer Roehe

Affiliations

  1. Scotland's Rural College, Edinburgh, United Kingdom.
  2. Institute for Animal Science and Technology, Polytechnic University of Valencia, Valencia, Spain.
  3. Edinburgh Genomics, The Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
  4. The Rowett Institute, University of Aberdeen, Aberdeen, United Kingdom.
  5. Division of Genetics and Genomics, The Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.

PMID: 32362882 PMCID: PMC7181398 DOI: 10.3389/fmicb.2020.00659

Abstract

A network analysis including relative abundances of all ruminal microbial genera (archaea, bacteria, fungi, and protists) and their genes was performed to improve our understanding of how the interactions within the ruminal microbiome affects methane emissions (CH

Copyright © 2020 Martínez-Álvaro, Auffret, Stewart, Dewhurst, Duthie, Rooke, Wallace, Shih, Freeman, Watson and Roehe.

Keywords: functional niches; metagenomics; methane emissions; network analysis; rumen microbiome

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