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Amin A, Ahmed I, Khalid N, et al. Insights on comparative bacterial diversity between different arid zones of Cholistan Desert, Pakistan. 3 Biotech. 2020;10(5):224doi: 10.1007/s13205-020-02204-6.
Amin, A., Ahmed, I., Khalid, N., Khan, I. U., Ali, A., Dahlawi, S. M., & Li, W. J. (2020). Insights on comparative bacterial diversity between different arid zones of Cholistan Desert, Pakistan. 3 Biotech, 10(5), 224. https://doi.org/10.1007/s13205-020-02204-6
Amin, Arshia, et al. "Insights on comparative bacterial diversity between different arid zones of Cholistan Desert, Pakistan." 3 Biotech vol. 10,5 (2020): 224. doi: https://doi.org/10.1007/s13205-020-02204-6
Amin A, Ahmed I, Khalid N, Khan IU, Ali A, Dahlawi SM, Li WJ. Insights on comparative bacterial diversity between different arid zones of Cholistan Desert, Pakistan. 3 Biotech. 2020 May;10(5):224. doi: 10.1007/s13205-020-02204-6. Epub 2020 May 02. PMID: 32373416; PMCID: PMC7196105.
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3 Biotech. 2020 May;10(5):224. doi: 10.1007/s13205-020-02204-6. Epub 2020 May 02.

Insights on comparative bacterial diversity between different arid zones of Cholistan Desert, Pakistan.

3 Biotech

Arshia Amin, Iftikhar Ahmed, Nauman Khalid, Inam Ullah Khan, Ahmad Ali, Saad Mohammad Dahlawi, Wen-Jun Li

Affiliations

  1. 1State Key Laboratory of Biocontrol and Guandong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275 People's Republic of China.
  2. 2National Culture Collection of Pakistan (NCCP), Bio-Resources Conservation Institute (BCI), National Agricultural Research Centre (NARC), Islamabad, 45500 Pakistan.
  3. Department of Bioinformatics and Biosciences, Capital University of Science and Technology, Islamabad, 45500 Pakistan.
  4. 4School of Food and Agricultural Sciences, University of Management and Technology, Lahore, 54000 Pakistan.
  5. 5Institute of Microbiology, Faculty of Veterinary and Animal Sciences,, Gomal University, Dera Ismail Khan, Khyber Pakhtunkhwa, Pakistan.
  6. 6Department of Environmental Health, College of Public Health, Imam Abdulrahman Bin Faisal University, Dammam, Kingdom of Saudi Arabia.

PMID: 32373416 PMCID: PMC7196105 DOI: 10.1007/s13205-020-02204-6

Abstract

The present study was conducted to analyze bacterial diversity profile of Cholistan desert located in Pakistan. The study investigates the influence of physicochemical parameters of soil on distribution of different bacteria at all taxonomic levels and also study the distribution pattern between different desert environments, particularly rhizospheric and bulk desert sands. Species richness showed phyla

© King Abdulaziz City for Science and Technology 2020.

Keywords: 16S rRNA; Bacterial community; Desert sand; Pyrosequencing; Rhizosphere

Conflict of interest statement

Conflicts of interestThe authors declare no conflict of interest.Ethical statementIt is to state that all the authors agreed to the contents of the manuscript and also agreed that we (Dr. Iftikhar Ahm

References

  1. Bioinformatics. 2006 Jul 1;22(13):1658-9 - PubMed
  2. Nat Rev Microbiol. 2013 Nov;11(11):789-99 - PubMed
  3. Environ Microbiol. 2010 Nov;12(11):2998-3006 - PubMed
  4. FEMS Microbiol Ecol. 2005 Oct 1;54(2):233-45 - PubMed
  5. Nat Methods. 2008 Mar;5(3):235-7 - PubMed
  6. Microb Ecol. 2013 Feb;65(2):405-14 - PubMed
  7. PLoS One. 2010 Mar 10;5(3):e9490 - PubMed
  8. Environ Microbiol. 2010 Jul;12(7):1842-54 - PubMed
  9. Proc Natl Acad Sci U S A. 2012 Jan 24;109(4):1159-64 - PubMed
  10. ISME J. 2016 Sep;10(9):2158-73 - PubMed
  11. Appl Environ Microbiol. 2011 Nov;77(21):7611-9 - PubMed
  12. PLoS One. 2013 May 07;8(5):e62901 - PubMed
  13. Nature. 2005 Jun 9;435(7043):750-1 - PubMed
  14. Appl Environ Microbiol. 1995 May;61(5):1816-21 - PubMed
  15. Appl Environ Microbiol. 2009 Dec;75(23):7537-41 - PubMed
  16. Microb Ecol. 2003 Oct;46(3):312-21 - PubMed
  17. Front Microbiol. 2020 Jan 08;10:2952 - PubMed
  18. Appl Environ Microbiol. 2005 Oct;71(10):5710-8 - PubMed
  19. Science. 2001 Oct 26;294(5543):804-8 - PubMed
  20. ISME J. 2010 Jan;4(1):17-27 - PubMed
  21. Front Microbiol. 2016 Sep 08;7:1415 - PubMed
  22. Nat Rev Microbiol. 2012 Jul 09;10(8):551-62 - PubMed
  23. Science. 2003 Nov 7;302(5647):1018-21 - PubMed
  24. Appl Environ Microbiol. 2009 Aug;75(15):5111-20 - PubMed
  25. Microb Ecol. 2017 Jul;74(1):116-127 - PubMed
  26. FEMS Microbiol Ecol. 2013 Apr;84(1):47-59 - PubMed
  27. Appl Environ Microbiol. 2002 Apr;68(4):1854-63 - PubMed
  28. Am J Bot. 2011 Mar;98(3):439-48 - PubMed
  29. Int J Syst Evol Microbiol. 2012 Mar;62(Pt 3):716-21 - PubMed
  30. ISME J. 2007 Aug;1(4):283-90 - PubMed
  31. FEMS Microbiol Ecol. 2009 Apr;68(1):1-13 - PubMed
  32. Microb Ecol. 2013 Nov;66(4):850-60 - PubMed
  33. Arch Microbiol. 2016 Dec;198(10):933-939 - PubMed
  34. Indian J Microbiol. 2016 Mar;56(1):35-45 - PubMed
  35. J Mol Biol. 1990 Oct 5;215(3):403-10 - PubMed
  36. Front Microbiol. 2016 Mar 31;7:419 - PubMed
  37. FEMS Microbiol Ecol. 2004 May 1;48(2):179-86 - PubMed
  38. Appl Environ Microbiol. 2012 Nov;78(21):7527-37 - PubMed

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