Display options
Cite
Dos Santos RAC, Steenwyk JL, Rivero-Menendez O, et al. Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens . Front Genet. 2020;11:459doi: 10.3389/fgene.2020.00459.
Dos Santos, R. A. C., Steenwyk, J. L., Rivero-Menendez, O., Mead, M. E., Silva, L. P., Bastos, R. W., Alastruey-Izquierdo, A., Goldman, G. H., & Rokas, A. (2020). Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens . Frontiers in genetics, 11459. https://doi.org/10.3389/fgene.2020.00459
Dos Santos, Renato A C, et al. "Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens ." Frontiers in genetics vol. 11 (2020): 459. doi: https://doi.org/10.3389/fgene.2020.00459
Dos Santos RAC, Steenwyk JL, Rivero-Menendez O, Mead ME, Silva LP, Bastos RW, Alastruey-Izquierdo A, Goldman GH, Rokas A. Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens . Front Genet. 2020 May 12;11:459. doi: 10.3389/fgene.2020.00459. eCollection 2020. PMID: 32477406; PMCID: PMC7236307.
Copy Download .nbib Format: NLM
Share it on

Front Genet. 2020 May 12;11:459. doi: 10.3389/fgene.2020.00459. eCollection 2020.

Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens .

Frontiers in genetics

Renato A C Dos Santos, Jacob L Steenwyk, Olga Rivero-Menendez, Matthew E Mead, Lilian P Silva, Rafael W Bastos, Ana Alastruey-Izquierdo, Gustavo H Goldman, Antonis Rokas

Affiliations

  1. Departamento de Ciências Farmacêuticas, Faculdade de Ciências Farmacêuticas de Ribeirão Preto, Universidade de São Paulo, São Paulo, Brazil.
  2. Department of Biological Sciences, Vanderbilt University, Nashville, TN, United States.
  3. Medical Mycology Reference Laboratory, National Center for Microbiology, Instituto de Salud Carlos III, Madrid, Spain.

PMID: 32477406 PMCID: PMC7236307 DOI: 10.3389/fgene.2020.00459

Abstract

Fungal pathogens are a global threat to human health. For example, fungi from the genus

Copyright © 2020 dos Santos, Steenwyk, Rivero-Menendez, Mead, Silva, Bastos, Alastruey-Izquierdo, Goldman and Rokas.

Keywords: Aspergillus; antifungal drug susceptibility; cryptic species; drug resistance; genetic determinants of virulence; genomics; strain heterogeneity; virulence

References

  1. Bioinformatics. 2009 Aug 1;25(15):1972-3 - PubMed
  2. mBio. 2017 Feb 21;8(1): - PubMed
  3. J Microbiol. 2015 Feb;53(2):91-9 - PubMed
  4. Bioinformatics. 2009 Jul 15;25(14):1754-60 - PubMed
  5. mSphere. 2019 Feb 20;4(1): - PubMed
  6. Proc Natl Acad Sci U S A. 2018 Jan 23;115(4):E753-E761 - PubMed
  7. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D459-64 - PubMed
  8. Antimicrob Agents Chemother. 2008 Jul;52(7):2305-12 - PubMed
  9. J Clin Microbiol. 2014 Oct;52(10):3707-21 - PubMed
  10. J Fungi (Basel). 2018 Mar 20;4(1): - PubMed
  11. Clin Microbiol Rev. 2017 Oct;30(4):1065-1091 - PubMed
  12. Bioinformatics. 2009 Jun 1;25(11):1422-3 - PubMed
  13. J Med Microbiol. 1996 Sep;45(3):186-91 - PubMed
  14. Mol Biol Evol. 2013 Apr;30(4):772-80 - PubMed
  15. Transpl Infect Dis. 2012 Oct;14(5):E60-3 - PubMed
  16. Antimicrob Agents Chemother. 2012 May;56(5):2598-603 - PubMed
  17. PLoS Biol. 2017 Nov 17;15(11):e2003583 - PubMed
  18. Future Microbiol. 2018 Aug;13:1175-1191 - PubMed
  19. Genome Announc. 2015 Aug 06;3(4): - PubMed
  20. Nucleic Acids Res. 2013 Jan;41(Database issue):D358-65 - PubMed
  21. Bioinformatics. 2014 May 1;30(9):1236-40 - PubMed
  22. Genome Res. 2010 Sep;20(9):1297-303 - PubMed
  23. Nat Rev Microbiol. 2020 Jun;18(6):319-331 - PubMed
  24. Bioinformatics. 2014 Aug 1;30(15):2114-20 - PubMed
  25. Fungal Genet Biol. 2000 Oct;31(1):21-32 - PubMed
  26. Sci Transl Med. 2012 Dec 19;4(165):165rv13 - PubMed
  27. J Bacteriol. 1998 Jun;180(12):3031-8 - PubMed
  28. PLoS Genet. 2008 Apr 11;4(4):e1000046 - PubMed
  29. Mycoses. 2016 Apr;59(4):198-219 - PubMed
  30. Genome Announc. 2016 Jan 14;4(1): - PubMed
  31. mBio. 2019 Jul 9;10(4): - PubMed
  32. Enferm Infecc Microbiol Clin. 2019 Oct;37(8):535-541 - PubMed
  33. Genome Res. 2015 Mar;25(3):413-25 - PubMed
  34. Biol Rev Camb Philos Soc. 2018 Jul 3;: - PubMed
  35. Front Microbiol. 2016 May 17;7:683 - PubMed
  36. PLoS Pathog. 2020 Feb 27;16(2):e1008315 - PubMed
  37. Front Microbiol. 2016 Sep 21;7:1382 - PubMed
  38. Clin Infect Dis. 2016 Aug 15;63(4):e1-e60 - PubMed
  39. Rev Iberoam Micol. 2010 Oct-Dec;27(4):155-82 - PubMed
  40. Med Mycol. 2015 May;53(4):353-60 - PubMed
  41. Eukaryot Cell. 2005 Mar;4(3):625-32 - PubMed
  42. Med Mycol. 2018 Apr 1;56(suppl_1):73-82 - PubMed
  43. Drugs. 2017 Apr;77(6):599-613 - PubMed
  44. Bioinformatics. 2015 Oct 1;31(19):3210-2 - PubMed
  45. Clin Microbiol Rev. 2019 Nov 13;33(1): - PubMed
  46. J Infect Public Health. 2020 Jan;13(1):1-10 - PubMed
  47. Curr Biol. 1998 May 7;8(10):603-6 - PubMed
  48. J Clin Microbiol. 2009 Oct;47(10):3138-41 - PubMed
  49. Med Mycol. 2011 Apr;49 Suppl 1:S107-13 - PubMed
  50. Nat Genet. 2011 May;43(5):491-8 - PubMed
  51. Antimicrob Agents Chemother. 2008 Sep;52(9):3092-8 - PubMed
  52. Nature. 2005 Dec 22;438(7071):1151-6 - PubMed
  53. Antimicrob Agents Chemother. 2017 Nov 22;61(12): - PubMed
  54. J Mol Evol. 1994 Sep;39(3):306-14 - PubMed
  55. mSphere. 2020 Apr 8;5(2): - PubMed
  56. J Antimicrob Chemother. 2019 Jun 1;74(6):1586-1590 - PubMed
  57. Sci Rep. 2018 Jul 18;8(1):10872 - PubMed
  58. mBio. 2016 Sep 20;7(5): - PubMed
  59. PLoS Pathog. 2007 Mar;3(3):e24 - PubMed
  60. mBio. 2015 Jun 02;6(3):e00536 - PubMed
  61. Mycopathologia. 2014 Dec;178(5-6):427-33 - PubMed
  62. Clin Exp Allergy. 2013 Aug;43(8):850-73 - PubMed
  63. Fly (Austin). 2012 Apr-Jun;6(2):80-92 - PubMed
  64. Int J Antimicrob Agents. 2017 Nov;50(5):607-616 - PubMed
  65. Genome Biol. 2019 Nov 14;20(1):238 - PubMed
  66. Bioinformatics. 2009 May 1;25(9):1189-91 - PubMed
  67. Pest Manag Sci. 2019 Feb;75(2):396-404 - PubMed
  68. Virulence. 2010 Nov-Dec;1(6):475-82 - PubMed
  69. J Comput Biol. 2012 May;19(5):455-77 - PubMed
  70. Antimicrob Agents Chemother. 2018 Feb 23;62(3): - PubMed
  71. Nat Microbiol. 2019 Dec;4(12):2430-2441 - PubMed
  72. Mol Biol Evol. 2018 Feb 1;35(2):518-522 - PubMed
  73. J Clin Microbiol. 2005 Feb;43(2):551-5 - PubMed
  74. Mol Biol Evol. 2015 Jan;32(1):268-74 - PubMed
  75. Pest Manag Sci. 2012 Jul;68(7):1034-40 - PubMed
  76. Antimicrob Agents Chemother. 2018 May 25;62(6): - PubMed
  77. J Clin Microbiol. 2014 Oct;52(10):3633-40 - PubMed
  78. Bioinformatics. 2013 Apr 15;29(8):1072-5 - PubMed
  79. Mycologia. 2005 Nov-Dec;97(6):1316-29 - PubMed
  80. PLoS One. 2014 Nov 19;9(11):e112963 - PubMed
  81. Trends Ecol Evol. 1996 Sep;11(9):367-72 - PubMed
  82. mBio. 2016 Sep 20;7(5): - PubMed
  83. Can J Microbiol. 2018 Jul;64(7):439-453 - PubMed
  84. Front Microbiol. 2019 Sep 04;10:1970 - PubMed
  85. Science. 2018 May 18;360(6390):739-742 - PubMed
  86. Front Microbiol. 2019 Apr 24;10:854 - PubMed
  87. Bioinformatics. 2009 Aug 15;25(16):2078-9 - PubMed
  88. Eur Respir J. 2016 Jan;47(1):45-68 - PubMed
  89. Annu Rev Microbiol. 2017 Sep 8;71:753-775 - PubMed
  90. Int J Antimicrob Agents. 2020 Jan;55(1):105807 - PubMed
  91. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W309-12 - PubMed
  92. Front Microbiol. 2020 Jan 21;10:3127 - PubMed
  93. Methods Enzymol. 2013;531:465-85 - PubMed
  94. J Chem Biol. 2014 Aug 27;7(4):143-61 - PubMed
  95. Mol Biol Evol. 2014 Jul;31(7):1793-802 - PubMed
  96. Genome Biol. 2017 Feb 14;18(1):28 - PubMed
  97. Antimicrob Agents Chemother. 2004 Apr;48(4):1197-203 - PubMed
  98. J Mol Biol. 1990 Oct 5;215(3):403-10 - PubMed
  99. Antimicrob Agents Chemother. 2010 Dec;54(12):4992-8 - PubMed

Publication Types