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JNCI Cancer Spectr. 2020 May 19;4(5):pkaa041. doi: 10.1093/jncics/pkaa041. eCollection 2020 Oct.

Epigenome-Wide Association Study Using Prediagnostic Bloods Identifies New Genomic Regions Associated With Pancreatic Cancer Risk.

JNCI cancer spectrum

Dominique S Michaud, Mengyuan Ruan, Devin C Koestler, Dong Pei, Carmen J Marsit, Immaculata De Vivo, Karl T Kelsey

Affiliations

  1. Department of Public Health & Community Medicine, Tufts University School of Medicine, Tufts University, Boston, MA, USA.
  2. Department of Epidemiology, Brown University, Providence, RI, USA.
  3. Department of Biostatistics & Data Science, University of Kansas Medical Center, Kansas City, KS, USA.
  4. University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS, USA.
  5. Department of Environmental Health and Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, USA.
  6. Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, and Harvard Medical School, Boston, MA, USA.
  7. Department of Pathology and Laboratory Medicine, Brown University, Providence, RI, USA.

PMID: 33134824 PMCID: PMC7583152 DOI: 10.1093/jncics/pkaa041

Abstract

BACKGROUND: Epigenome-wide association studies using peripheral blood have identified specific sites of DNA methylation associated with risk of various cancers and may hold promise to identify novel biomarkers of risk; however, few studies have been performed for pancreatic cancer and none using a prospective study design.

METHODS: Using a nested case-control study design, incident pancreatic cancer cases and matched controls were identified from participants who provided blood at baseline in 3 prospective cohort studies. DNA methylation levels were measured in DNA extracted from leukocytes using the Illumina MethylationEPIC array. Average follow-up period for this analysis was 13 years.

RESULTS: Several new genomic regions were identified as being differentially methylated in cases and controls; the 5 strongest associations were observed for CpGs located in genes

CONCLUSIONS: Changes in DNA methylation in peripheral blood may mark alterations in metabolic or immune pathways that play a role in pancreatic cancer. Identifying new biological pathways in carcinogenesis of pancreatic cancer using epigenome-wide association studies approach could provide new opportunities for improving treatment and prevention.

© The Author(s) 2020. Published by Oxford University Press.

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