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Brosset S, Dumont M, Cevidanes L, et al. Web Infrastructure for Data Management, Storage and Computation. Proc SPIE Int Soc Opt Eng. 2021;11600doi: 10.1117/12.2582283.
Brosset, S., Dumont, M., Cevidanes, L., Soroushmehr, R., Bianchi, J., Gurgel, M., Deleat-Besson, R., Le, C., Ruellas, A., Yatabe, M., Junior, C. C., Gomes, L., Goncalves, J., Najarian, K., Gryak, J., Styner, M., Paniagua, B., & Prieto, J. C. (2021). Web Infrastructure for Data Management, Storage and Computation. Proceedings of SPIE--the International Society for Optical Engineering, 11600. https://doi.org/10.1117/12.2582283
Brosset, Serge, et al. "Web Infrastructure for Data Management, Storage and Computation." Proceedings of SPIE--the International Society for Optical Engineering vol. 11600 (2021). doi: https://doi.org/10.1117/12.2582283
Brosset S, Dumont M, Cevidanes L, Soroushmehr R, Bianchi J, Gurgel M, Deleat-Besson R, Le C, Ruellas A, Yatabe M, Junior CC, Gomes L, Goncalves J, Najarian K, Gryak J, Styner M, Paniagua B, Prieto JC. Web Infrastructure for Data Management, Storage and Computation. Proc SPIE Int Soc Opt Eng. 2021 Feb;11600. doi: 10.1117/12.2582283. Epub 2021 Feb 14. PMID: 33814672; PMCID: PMC8015809.
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Proc SPIE Int Soc Opt Eng. 2021 Feb;11600. doi: 10.1117/12.2582283. Epub 2021 Feb 14.

Web Infrastructure for Data Management, Storage and Computation.

Proceedings of SPIE--the International Society for Optical Engineering

Serge Brosset, Maxime Dumont, Lucia Cevidanes, Reza Soroushmehr, Jonas Bianchi, Marcela Gurgel, Romain Deleat-Besson, Celia Le, Antonio Ruellas, Marilia Yatabe, Cauby Chaves Junior, Liliane Gomes, Joao Goncalves, Kayvan Najarian, Jonathan Gryak, Martin Styner, Beatriz Paniagua, Juan Carlos Prieto

Affiliations

  1. University of Michigan.
  2. Kitware, Inc.
  3. University of North Carolina at Chapel Hill.

PMID: 33814672 PMCID: PMC8015809 DOI: 10.1117/12.2582283

Abstract

The Data Storage for Computation and Integration (DSCI) proposes management innovations for web-based secure data storage, algorithms deployment, and task execution. Its architecture allows inclusion of plugins for upload, browsing, sharing, and task execution in remote computing grids. Here, we demonstrate the DSCI implementation and the deployment of Image processing tools (TMJSeg), machine learning algorithms (MandSeg, DentalModelSeg), and advanced statistical packages (Multivariate Functional Shape Data Analysis, MFSDA), with data transfer and task execution handled by the clusterpost plug-in. Due to its comprehensive web-based design, local software installation is no longer required. The DSCI aims to enable and maintain a distributed computing and collaboration environment across multi-site clinical centers for the data processing of multisource features such as clinical, biological markers, volumetric images, and 3D surface models, with particular emphasis on analytics for temporomandibular joint osteoarthritis (TMJ OA).

References

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