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Couto J, Seixas G, Stutzer C, et al. Probing the . Biomedicines. 2021;9(4)doi: 10.3390/biomedicines9040363.
Couto, J., Seixas, G., Stutzer, C., Olivier, N. A., Maritz-Olivier, C., Antunes, S., & Domingos, A. (2021). Probing the . Biomedicines, 9(4), . https://doi.org/10.3390/biomedicines9040363
Couto, Joana, et al. "Probing the ." Biomedicines vol. 9,4 (2021). doi: https://doi.org/10.3390/biomedicines9040363
Couto J, Seixas G, Stutzer C, Olivier NA, Maritz-Olivier C, Antunes S, Domingos A. Probing the . Biomedicines. 2021 Mar 31;9(4). doi: 10.3390/biomedicines9040363. PMID: 33807386; PMCID: PMC8067113.
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Biomedicines. 2021 Mar 31;9(4). doi: 10.3390/biomedicines9040363.

Probing the .

Biomedicines

Joana Couto, Gonçalo Seixas, Christian Stutzer, Nicholas A Olivier, Christine Maritz-Olivier, Sandra Antunes, Ana Domingos

Affiliations

  1. Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Rua da Junqueira, 100, 1349-008 Lisboa, Portugal.
  2. Global Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa (GHTM-IHMT-UNL), Rua da Junqueira, 100, 1349-008 Lisboa, Portugal.
  3. Division of Genetics, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, University of Pretoria, Pretoria 0002, South Africa.
  4. Department of Plant and Soil Sciences, University of Pretoria, Pretoria 0002, South Africa.
  5. Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa.

PMID: 33807386 PMCID: PMC8067113 DOI: 10.3390/biomedicines9040363

Abstract

In the wake of the 'omics' explosion of data, reverse vaccinology approaches are being applied more readily as an alternative for the discovery of candidates for next generation diagnostics and vaccines. Promising protective antigens for the control of ticks and tick-borne diseases can be discovered by mining available omics data for immunogenic epitopes. The present study aims to explore the previously obtained

Keywords: immunoinformatics; reverse vaccinology; sialotranscriptome; tick; vaccine

References

  1. Nature. 1987 Apr 9-15;326(6113):624-6 - PubMed
  2. FEBS Lett. 1990 Dec 10;276(1-2):172-4 - PubMed
  3. Ticks Tick Borne Dis. 2020 Sep;11(5):101461 - PubMed
  4. Bioinformatics. 2012 Dec 1;28(23):3150-2 - PubMed
  5. J Biol Chem. 1998 Jun 5;273(23):14450-60 - PubMed
  6. Immunobiology. 2020 May;225(3):151949 - PubMed
  7. Protein Eng. 1998 Dec;11(12):1155-61 - PubMed
  8. J Biol Chem. 2017 Sep 22;292(38):15670-15680 - PubMed
  9. PLoS One. 2015 Sep 03;10(9):e0136990 - PubMed
  10. Int J Parasitol. 2019 Feb;49(2):115-125 - PubMed
  11. Proteins. 2006 Aug 15;64(3):643-51 - PubMed
  12. Adv Enzymol Relat Areas Mol Biol. 1978;47:45-148 - PubMed
  13. Mol Immunol. 2018 Aug;100:113-119 - PubMed
  14. Trends Biochem Sci. 2002 Dec;27(12):599-601 - PubMed
  15. J Dairy Sci. 2018 Dec;101(12):11020-11032 - PubMed
  16. Vaccines (Basel). 2019 Jul 28;7(3): - PubMed
  17. Front Immunol. 2016 Aug 29;7:327 - PubMed
  18. Front Microbiol. 2013 Nov 19;4:337 - PubMed
  19. Bioinformatics. 2005 May 1;21(9):1846-52 - PubMed
  20. Ticks Tick Borne Dis. 2018 Jul;9(5):1158-1172 - PubMed
  21. Vaccines (Basel). 2020 Feb 19;8(1): - PubMed
  22. Immunogenetics. 2005 Apr;57(1-2):33-41 - PubMed
  23. Bioinformatics. 2019 Sep 1;35(17):3020-3027 - PubMed
  24. Nat Biotechnol. 2011 May 15;29(7):644-52 - PubMed
  25. Immunotargets Ther. 2020 Feb 26;9:13-30 - PubMed
  26. Vet Parasitol. 2019 Aug;272:1-12 - PubMed
  27. Vaccine. 2010 Apr 9;28(17):2993-8 - PubMed
  28. Bioinformatics. 2014 May 1;30(9):1236-40 - PubMed
  29. Sci Rep. 2016 Mar 08;6:22843 - PubMed
  30. Bioinformatics. 2018 Jun 15;34(12):2061-2068 - PubMed
  31. Arch Immunol Ther Exp (Warsz). 2015 Jun;63(3):169-79 - PubMed
  32. Bioinformatics. 2014 Aug 1;30(15):2114-20 - PubMed
  33. J Clin Microbiol. 1999 May;37(5):1646-50 - PubMed
  34. Parasit Vectors. 2017 Apr 26;10(1):206 - PubMed
  35. Anim Health Res Rev. 2007 Jun;8(1):23-8 - PubMed
  36. Nat Methods. 2011 Sep 29;8(10):785-6 - PubMed
  37. Proc Int Conf Intell Syst Mol Biol. 1998;6:175-82 - PubMed
  38. Proc Natl Acad Sci U S A. 1989 Dec;86(24):9657-61 - PubMed
  39. Pathogens. 2020 Jul 28;9(8): - PubMed
  40. Front Physiol. 2019 Jun 26;10:812 - PubMed
  41. Vet Immunol Immunopathol. 2002 Sep 25;88(3-4):163-72 - PubMed
  42. Expert Rev Vaccines. 2020 Aug;19(8):699-726 - PubMed
  43. J Proteomics. 2015 Oct 14;128:58-68 - PubMed
  44. Nucleic Acids Res. 2013 Jan;41(Database issue):D344-7 - PubMed
  45. BMC Genomics. 2020 Apr 29;21(1):331 - PubMed
  46. J Arthropod Borne Dis. 2019 Jun 24;13(2):214-223 - PubMed
  47. Front Immunol. 2018 Oct 08;9:2315 - PubMed
  48. J Immunol. 1989 Aug 15;143(4):1346-51 - PubMed
  49. Scand J Immunol. 2017 May;85(5):350-364 - PubMed
  50. Bioinformatics. 2015 Oct 1;31(19):3210-2 - PubMed
  51. PLoS One. 2013 Jul 29;8(7):e70115 - PubMed
  52. Bioinformatics. 2017 Oct 1;33(19):3098-3100 - PubMed
  53. BMC Bioinformatics. 2007 Jan 05;8:4 - PubMed
  54. Front Immunol. 2018 Oct 15;9:2213 - PubMed
  55. Parasitol Res. 2016 Jul;115(7):2545-60 - PubMed
  56. Front Vet Sci. 2020 Jun 09;7:319 - PubMed
  57. Vaccines (Basel). 2020 Jun 18;8(2): - PubMed
  58. Cell Host Microbe. 2009 Nov 19;6(5):482-92 - PubMed
  59. Nucleic Acids Res. 2015 Jul 1;43(W1):W408-12 - PubMed
  60. Expert Rev Vaccines. 2020 Mar;19(3):217-225 - PubMed
  61. Nucleic Acids Res. 2017 Jul 3;45(W1):W24-W29 - PubMed
  62. Proc Natl Acad Sci U S A. 2007 Aug 14;104(33):13461-6 - PubMed
  63. Pathogens. 2020 Jun 25;9(6): - PubMed
  64. Nat Biotechnol. 2005 Sep;23(9):1147-57 - PubMed
  65. BMC Bioinformatics. 2019 Feb 4;19(Suppl 13):468 - PubMed
  66. Nat Biotechnol. 2019 Apr;37(4):420-423 - PubMed
  67. Methods Mol Biol. 2019;1962:227-245 - PubMed
  68. J Biomed Inform. 2019 May;93:103160 - PubMed
  69. Ann Parasitol. 2014;60(3):169-77 - PubMed
  70. Sci Rep. 2018 Jun 13;8(1):9044 - PubMed
  71. PLoS One. 2013 Sep 13;8(9):e73957 - PubMed
  72. Ticks Tick Borne Dis. 2016 Jun;7(4):573-85 - PubMed
  73. Front Cell Infect Microbiol. 2017 Apr 07;7:114 - PubMed
  74. Biochim Biophys Acta. 2009 Mar;1790(3):173-81 - PubMed
  75. Front Cell Infect Microbiol. 2018 Mar 13;8:67 - PubMed
  76. Microbiol Spectr. 2014 Aug;2(4):AID-0019-2014 - PubMed
  77. Infect Genet Evol. 2020 Oct;84:104346 - PubMed
  78. Front Cell Infect Microbiol. 2018 May 04;8:116 - PubMed
  79. Vet Parasitol. 2017 Sep 15;244:102-110 - PubMed
  80. Microb Genom. 2016 Aug 25;2(8):e000071 - PubMed
  81. Trends Parasitol. 2016 May;32(5):368-377 - PubMed
  82. Int J Parasitol Drugs Drug Resist. 2018 Dec;8(3):361-371 - PubMed
  83. Nucleic Acids Res. 2019 Jul 2;47(W1):W636-W641 - PubMed
  84. Ticks Tick Borne Dis. 2016 Feb;7(1):13-19 - PubMed
  85. Front Biosci (Landmark Ed). 2009 Jan 01;14:2051-88 - PubMed
  86. J Mol Biol. 2001 Jan 19;305(3):567-80 - PubMed
  87. J Biol Chem. 1996 May 3;271(18):10786-92 - PubMed
  88. Bioinformatics. 2014 Mar 15;30(6):846-51 - PubMed
  89. Hum Vaccin. 2008 May-Jun;4(3):184-8 - PubMed
  90. Ticks Tick Borne Dis. 2015 Sep;6(6):695-710 - PubMed
  91. Front Pharmacol. 2018 Oct 24;9:1208 - PubMed
  92. Eur J Pharm Sci. 2020 Aug 1;151:105396 - PubMed
  93. J Mol Model. 2014 Jun;20(6):2278 - PubMed
  94. Ticks Tick Borne Dis. 2018 May;9(4):844-849 - PubMed
  95. Ticks Tick Borne Dis. 2012 Jun;3(3):179-87 - PubMed
  96. Front Chem. 2018 Jul 06;6:246 - PubMed
  97. Vector Borne Zoonotic Dis. 2020 Mar;20(3):159-170 - PubMed
  98. Malar J. 2020 Feb 19;19(1):79 - PubMed
  99. Structure. 2014 Apr 8;22(4):646-57 - PubMed
  100. Biochemistry. 1986 Sep 23;25(19):5425-32 - PubMed
  101. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W585-7 - PubMed
  102. PLoS One. 2013 Jul 03;8(7):e67765 - PubMed
  103. Nat Struct Biol. 1995 May;2(5):358-9 - PubMed
  104. Infect Immun. 2001 Dec;69(12):7946-9 - PubMed
  105. BMC Struct Biol. 2009 Jul 31;9:50 - PubMed
  106. Vet Parasitol. 2013 Jan 16;191(1-2):35-43 - PubMed
  107. Microbes Infect. 2008 Jul;10(8):845-9 - PubMed
  108. Protein Sci. 2014 Aug;23(8):1077-93 - PubMed
  109. J Exp Med. 2016 Apr 4;213(4):469-81 - PubMed
  110. Infect Immun. 2014 Feb;82(2):818-29 - PubMed
  111. Adv Protein Chem Struct Biol. 2018;112:221-263 - PubMed
  112. Comput Struct Biotechnol J. 2017 Mar 31;15:307-319 - PubMed

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