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Front Plant Sci. 2021 Jul 20;12:667678. doi: 10.3389/fpls.2021.667678. eCollection 2021.

Chia (.

Frontiers in plant science

Parul Gupta, Matthew Geniza, Sushma Naithani, Jeremy L Phillips, Ebaad Haq, Pankaj Jaiswal

Affiliations

  1. Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, United States.
  2. Molecular and Cellular Biology Graduate Program, Oregon State University, Corvallis, OR, United States.

PMID: 34354718 PMCID: PMC8330693 DOI: 10.3389/fpls.2021.667678

Abstract

Chia (

Copyright © 2021 Gupta, Geniza, Naithani, Phillips, Haq and Jaiswal.

Keywords: BUSCO plant gene expression; Chia (Salvia hispanica L.); expression atlas; omega-3 fatty acids; polyunsaturated fatty acid; pseudocereal grain; superfood; transcriptome

Conflict of interest statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

References

  1. J Exp Bot. 2012 Apr;63(7):2809-23 - PubMed
  2. Plant J. 2003 Oct;36(1):94-104 - PubMed
  3. CSH Protoc. 2007 Jul 01;2007:pdb.top17 - PubMed
  4. Genome Res. 2008 May;18(5):821-9 - PubMed
  5. Trends Plant Sci. 2005 Dec;10(12):594-602 - PubMed
  6. Nat Methods. 2017 Apr;14(4):417-419 - PubMed
  7. Front Plant Sci. 2013 Jun 11;4:189 - PubMed
  8. Bioinformatics. 2006 Jul 1;22(13):1658-9 - PubMed
  9. Nat Plants. 2019 Apr;5(4):358-362 - PubMed
  10. Prostaglandins Leukot Essent Fatty Acids. 2013 Oct;89(5):279-89 - PubMed
  11. Plant Physiol. 2009 Oct;151(2):655-68 - PubMed
  12. Funct Integr Genomics. 2006 Jul;6(3):202-11 - PubMed
  13. Front Plant Sci. 2016 Sep 30;7:1446 - PubMed
  14. BMC Plant Biol. 2010 Aug 05;10:160 - PubMed
  15. EXCLI J. 2017 Mar 06;16:160-173 - PubMed
  16. PLoS One. 2015 Apr 13;10(4):e0123580 - PubMed
  17. Nutr Metab Cardiovasc Dis. 2017 Feb;27(2):138-146 - PubMed
  18. Plant Cell Environ. 2018 Sep;41(9):2209-2225 - PubMed
  19. Plant J. 2011 May;66(4):553-63 - PubMed
  20. Biochem Biophys Res Commun. 2002 Jan 25;290(3):998-1009 - PubMed
  21. Plant J. 2016 Dec;88(5):879-894 - PubMed
  22. Eur J Clin Nutr. 2010 Apr;64(4):436-8 - PubMed
  23. J Biomed Biotechnol. 2012;2012:171956 - PubMed
  24. Plant Physiol. 2008 Mar;146(3):1305-21 - PubMed
  25. Plant Physiol. 2009 Jan;149(1):286-96 - PubMed
  26. Genome Res. 2001 Aug;11(8):1441-52 - PubMed
  27. Nucleic Acids Res. 2018 Jul 2;46(W1):W537-W544 - PubMed
  28. Bioinformatics. 2014 May 1;30(9):1236-40 - PubMed
  29. Diabetes Care. 2007 Nov;30(11):2804-10 - PubMed
  30. Nat Prod Res. 2013;27(18):1673-6 - PubMed
  31. Front Plant Sci. 2017 Oct 18;8:1789 - PubMed
  32. Genome Res. 2016 Aug;26(8):1134-44 - PubMed
  33. Plant Cell. 2008 Jul;20(7):1775-85 - PubMed
  34. Bioinformatics. 2016 Nov 1;32(21):3321-3323 - PubMed
  35. Br J Nutr. 2009 Jan;101(1):41-50 - PubMed
  36. Planta. 2010 Jul;232(2):337-52 - PubMed
  37. Phytomedicine. 2002 Dec;9(8):709-14 - PubMed
  38. PLoS One. 2013 Apr 23;8(4):e61722 - PubMed
  39. Mol Plant. 2017 Feb 13;10(2):323-339 - PubMed
  40. Proc Natl Acad Sci U S A. 2009 May 5;106(18):7648-53 - PubMed
  41. Drug Res (Stuttg). 2014 Dec;64(12):638-46 - PubMed
  42. Science. 2014 Jan 24;343(6169):408-11 - PubMed
  43. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W182-5 - PubMed
  44. Science. 2008 Nov 14;322(5904):1113-6 - PubMed
  45. Genome Biol. 2013 Jan 31;14(1):401 - PubMed
  46. Sci Rep. 2019 Jul 5;9(1):9761 - PubMed
  47. PLoS Genet. 2012 Feb;8(2):e1002506 - PubMed
  48. Bioinformatics. 2015 Oct 1;31(19):3210-2 - PubMed
  49. Plant Physiol. 2020 Aug;183(4):1420-1421 - PubMed
  50. Plants (Basel). 2020 Mar 24;9(3): - PubMed
  51. Bioinformatics. 2013 Apr 15;29(8):1035-43 - PubMed
  52. Plant Cell. 2008 Oct;20(10):2763-82 - PubMed
  53. Plant Genome. 2016 Mar;9(1): - PubMed
  54. Plant J. 2017 Sep;91(6):1064-1087 - PubMed
  55. BMC Bioinformatics. 2011 Aug 04;12:323 - PubMed
  56. Adv Food Nutr Res. 2015;75:53-75 - PubMed
  57. Plant J. 2005 Jul;43(1):68-78 - PubMed
  58. BMC Genomics. 2015 Nov 14;16:935 - PubMed
  59. J Food Sci Technol. 2016 Apr;53(4):1750-8 - PubMed
  60. Plant Physiol. 2015 Nov;169(3):1607-18 - PubMed
  61. PLoS One. 2018 Jan 19;13(1):e0191432 - PubMed
  62. Nat Methods. 2012 Mar 04;9(4):357-9 - PubMed
  63. Plant Cell. 2005 Jul;17(7):2059-76 - PubMed
  64. PLoS One. 2016 Jan 21;11(1):e0147310 - PubMed
  65. PLoS One. 2011 Apr 13;6(4):e18760 - PubMed
  66. Plant Mol Biol. 2000 Mar;42(4):657-65 - PubMed
  67. Bioinformatics. 2012 Apr 15;28(8):1086-92 - PubMed
  68. Biotechnol Biofuels. 2017 Jun 21;10:159 - PubMed
  69. Plant Cell. 2007 Feb;19(2):534-48 - PubMed
  70. PLoS One. 2014 Mar 12;9(3):e87693 - PubMed
  71. Ther Adv Psychopharmacol. 2012 Jun;2(3):103-13 - PubMed
  72. Bioinformatics. 2013 Apr 15;29(8):1072-5 - PubMed
  73. Genomics. 2011 Oct;98(4):272-9 - PubMed
  74. Plant Cell. 2005 Mar;17(3):705-21 - PubMed
  75. Nucleic Acids Res. 2020 Jan 8;48(D1):D689-D695 - PubMed
  76. Mol Plant. 2015 Jan;8(1):188-91 - PubMed
  77. Nature. 2020 Mar;579(7799):409-414 - PubMed
  78. Rocz Panstw Zakl Hig. ;68(2):123-129 - PubMed
  79. Eur J Clin Nutr. 2017 Feb;71(2):234-238 - PubMed
  80. Mol Plant. 2018 Aug 6;11(8):1084-1096 - PubMed
  81. Science. 2005 Jul 8;309(5732):290-3 - PubMed
  82. Plant J. 2004 Oct;40(1):22-34 - PubMed
  83. Front Plant Sci. 2016 Jan 05;6:1194 - PubMed
  84. PLoS One. 2012;7(1):e30355 - PubMed
  85. J Vis Exp. 2017 May 9;(123): - PubMed
  86. Front Plant Sci. 2019 May 14;10:591 - PubMed
  87. EMBO J. 2015 Aug 4;34(15):1992-2007 - PubMed
  88. Nucleic Acids Res. 2017 Jul 3;45(W1):W122-W129 - PubMed
  89. Nucleic Acids Res. 2021 Jan 8;49(D1):D1452-D1463 - PubMed
  90. Nucleic Acids Res. 2017 Jan 4;45(D1):D1040-D1045 - PubMed
  91. Nature. 2007 Feb 1;445(7127):537-40 - PubMed
  92. Plant J. 2010 Jul 1;63(1):86-99 - PubMed
  93. Nucleic Acids Res. 2018 Jan 4;46(D1):D246-D251 - PubMed
  94. Plant Physiol. 2006 Sep;142(1):181-92 - PubMed

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