M Abebe, MA Candales, A Duong, KS Hood, T Li… - Mobile DNA, 2013 - Springer

A pipeline of programs for collecting and analyzing group II intron retroelement sequences from GenBank.

pipeline programs

Abebe

GSID: kFhg9jtYl88J

Excerpt

… Here we present a pipeline of 11 programs that collect and analyze group II intron sequences from GenBank. The pipeline begins with a BLAST search of GenBank using a set of representative group II IEPs as queries. Subsequent steps download the corresponding genomic …

Similar articles

Comprehensive phylogenetic analysis of bacterial group II intron-encoded ORFs lacking the DNA endonuclease domain reveals new varieties.

[No authors listed]
N Toro, F Martínez-Abarca - PLoS One, 2013 - journals.plos.org
GSID: dT7S8rWZRqcJ

Bioinformatic and phylogenetic analyses of retroelements in bacteria.

[No authors listed]
L Wu - 2018 - prism.ucalgary.ca
GSID: cdJukV4i9JEJ

Cited by

Evolution of group II introns.

[No authors listed]
GSID: Xdl7RasFo-EJ

Programmable genome editing tools and their regulation for efficient genome engineering.

[No authors listed]
GSID: p1SwtyI5fJcJ

Using bioinformatic and phylogenetic approaches to classify transposable elements and understand their complex evolutionary histories.

[No authors listed]
GSID: O82VsAuhVJ8J