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Yu, N. Y., Wagner, J. R., Laird, M. R., Melli, G., Rey, S., Lo, R., ... & Brinkman, F. S. (2010). PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes. Bioinformatics, 26(13), 1608-1615.
Yu, Nancy Y., et al. "PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes." Bioinformatics 26.13 (2010): 1608-1615.
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NY Yu, JR Wagner, MR Laird, G Melli, S Rey… - …, 2010 - academic.oup.com

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes.

Build and Broaden 3.0 AND Program Evaluation

Laird, Melli, Wagner, Yu

GSID: rbQi5qaNCDwJ

Excerpt

Motivation: PSORTb has remained the most precise bacterial protein subcellular localization (SCL) predictor since it was first made available in 2003. However, the recall needs to be improved and no accurate SCL predictors yet make predictions for archaea, nor differentiate important localization subcategories, such as proteins targeted to a host cell or bacterial hyperstructures/organelles. Such improvements should preferably be encompassed in a freely available web-based predictor that can also be used as a standalone program …

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