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Lundin M, Mikkelsen B, Syed M. Identification of a novel putative SINE sequence in a Salmo salar cosmid clone. J Mar Biotechnol. 1998;6(3):198-200
Lundin, M., Mikkelsen, B., & Syed, M. (1998). Identification of a novel putative SINE sequence in a Salmo salar cosmid clone. Journal of marine biotechnology, 6(3), 198-200.
Lundin, et al. "Identification of a novel putative SINE sequence in a Salmo salar cosmid clone." Journal of marine biotechnology vol. 6,3 (1998): 198-200.
Lundin M, Mikkelsen B, Syed M. Identification of a novel putative SINE sequence in a Salmo salar cosmid clone. J Mar Biotechnol. 1998 Aug;6(3):198-200. PMID: 9701646.
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J Mar Biotechnol. 1998 Aug;6(3):198-200.

Identification of a novel putative SINE sequence in a Salmo salar cosmid clone.

Journal of marine biotechnology

Lundin, Mikkelsen, Syed

Affiliations

  1. Department of Morphology, Genetics and Aquatic Biology, Norwegian College of Veterinary Medicine, P.O. Box 8146-Dep, N-0033 Oslo, Norway

PMID: 9701646

Abstract

A novel putative SINE sequence was found in a randomly selected cosmid clone of Salmo salar. The sequence (cSSML032Alu, GenBank accession number: L77085) was found to have 78% identity in 212 bp, with one Salvelinus namaycush AluI satellite sequence (GenBank accession number: U27096) and 69% identity in 197 bp, with another AluI satellite sequence from S. namaycush (GenBank accession number: U27091). Colony hybridization of cSSML032Alu to a salmon cosmid library indicated its dispersed presence in the genome, with a copy number in the range of a few thousand. Direct terminal repeats of nine bases and a potential poly(A) tail remnant identified in the S. salar cSSML032Alu sequence indicate a possible ancient retroposon unit.

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