k-12
Xiao H, Burgess R, Cashel M.
GSID: HrvQSmIcxHAJ
D Gentry, H Xiao, R Burgess, M Cashel - Journal of bacteriology, 1991 - Am Soc Microbiol
Igarashi et al. (K. Igarashi, N. Fujita, and A. Ishihama, Nucleic Acids Res. 17:8755-8765, 1989) reported that the omega (omega) subunit of Escherichia coli RNA polymerase was required for stringent control as judged by in vitro transcription assays in...
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Gentry, D., Xiao, H., Burgess, R., & Cashel, M. (1991). The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo. Journal of bacteriology, 173(12), 3901-3903.
Gentry, D., et al. "The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo." Journal of bacteriology 173.12 (1991): 3901-3903.
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STEM and diversification
Beane JE, Brackney DE, Ebel GD.
GSID: 3sA5mfZ7fDcJ
DE Brackney, JE Beane, GD Ebel - PLoS pathogens, 2009 - journals.plos.org
… Notably, well documented imperfect stem-loops and other critical functional RNA structures within the 3′-UTR do not appear to be intensely targeted by the RNAi response. …
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Brackney, D. E., Beane, J. E., & Ebel, G. D. (2009). RNAi targeting of West Nile virus in mosquito midguts promotes virus diversification. PLoS pathogens, 5(7), e1000502.
Brackney, Doug E., Jennifer E. Beane, and Gregory D. Ebel. "RNAi targeting of West Nile virus in mosquito midguts promotes virus diversification." PLoS pathogens 5.7 (2009): e1000502.
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Louis Stokes Alliances for Minority Participation AND Program Evaluation
Hevener KE.
GSID: Hw3mhw8XpLwJ
UT Dang, I Zamora, KE Hevener… - Antimicrobial agents …, 2016 - Am Soc Microbiol
We characterized clinically occurring and novel mutations in the β subunit of RNA polymerase in Clostridium difficile (Cd RpoB), conferring rifamycin (including rifaximin) resistance. The Arg505Lys substitution did not impose an in vitro fitness cost, which may be one...
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Dang, U. T., Zamora, I., Hevener, K. E., Adhikari, S., Wu, X., & Hurdle, J. G. (2016). Rifamycin resistance in Clostridium difficile is generally associated with a low fitness burden. Antimicrobial agents and chemotherapy, 60(9), 5604-5607.
Dang, Uyen T., et al. "Rifamycin resistance in Clostridium difficile is generally associated with a low fitness burden." Antimicrobial agents and chemotherapy 60.9 (2016): 5604-5607.
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diversity
Dolja VV, Kreuze JF.
GSID: HCYBY1qwsugJ
VV Dolja, JF Kreuze, JPT Valkonen - Virus research, 2006 - Elsevier
The largest extant RNA genomes are found in two diverse families of positive-strand RNA viruses, the animal Coronaviridae and the plant Closteroviridae. Comparative analysis of the …
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Dolja, V. V., Kreuze, J. F., & Valkonen, J. P. (2006). Comparative and functional genomics of closteroviruses. Virus research, 117(1), 38-51.
Dolja, Valerian V., Jan F. Kreuze, and Jari PT Valkonen. "Comparative and functional genomics of closteroviruses." Virus research 117.1 (2006): 38-51.
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STEM and males
[No authors listed]
GSID: JN2XnMj4OJMJ
A Gely-Pernot, C Hao, L Legoff, L Multigner… - Scientific reports, 2018 - nature.com
… The RNA qRT-PCR expression analysis in F1 and transcriptomics analysis in F3 males using the … Differential peaks observed in F1 males are significantly enriched in predicted ESR1 …
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Gely-Pernot, A., Hao, C., Legoff, L., Multigner, L., D’Cruz, S. C., Kervarrec, C., ... & Smagulova, F. (2018). Gestational exposure to chlordecone promotes transgenerational changes in the murine reproductive system of males. Scientific reports, 8(1), 1-18.
Gely-Pernot, Aurore, et al. "Gestational exposure to chlordecone promotes transgenerational changes in the murine reproductive system of males." Scientific reports 8.1 (2018): 1-18.
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STEM and males
Koya SK, Meller VH.
GSID: Z3tMqrxM_ywJ
SK Koya, VH Meller - PloS one, 2015 - journals.plos.org
… Our finding that disruption of this stem blocks dosage compensation but does not … the stem loop is required for the heterochromatic function of roX1, as roX1 Δ10 , removing the stem …
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Koya, S. K., & Meller, V. H. (2015). Modulation of heterochromatin by male specific lethal proteins and roX RNA in Drosophila melanogaster males. PloS one, 10(10), e0140259.
Koya, S. Kiran, and Victoria H. Meller. "Modulation of heterochromatin by male specific lethal proteins and roX RNA in Drosophila melanogaster males." PloS one 10.10 (2015): e0140259.
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Louis Stokes Alliances for Minority Participation AND Program Evaluation
[No authors listed]
GSID: FepKZx-eALQJ
TF Chan, SG Van Winkle - 2021 - louis.uah.edu
• Post-traumatic stress disorder (PTSD) results in strong negative changes to mood and behavior after exposure to violent and/or traumatic events. However, diagnosing PTSD is often hindered by the inaccuracy and stigma of selfreporting of symptoms, highlighting the need...
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Chan, T. F., & Van Winkle, S. G. (2021). Biomarkers of PTSD: Dried Blood Spot mRNA Isolation, Amplification, and Analysis.
Chan, Tyler F., and Sarah G. Van Winkle. "Biomarkers of PTSD: Dried Blood Spot mRNA Isolation, Amplification, and Analysis." (2021).
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STEM and diversify
Mitton-Fry RM, Wang J.
GSID: 96qUeFThNCUJ
RM Mitton-Fry, SJ DeGregorio, J Wang, TA Steitz… - Science, 2010 - science.org
… For crystallization, the upper stem of this central sequence was capped with a CG base pair and a GAAA tetraloop and the lower stem was followed by a 3′ C nucleotide (to produce a …
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Mitton-Fry, R. M., DeGregorio, S. J., Wang, J., Steitz, T. A., & Steitz, J. A. (2010). Poly (A) tail recognition by a viral RNA element through assembly of a triple helix. Science, 330(6008), 1244-1247.
Mitton-Fry, Rachel M., et al. "Poly (A) tail recognition by a viral RNA element through assembly of a triple helix." Science 330.6008 (2010): 1244-1247.
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STEM and males
Hutvágner G, Zamore PD.
GSID: oZqsAK7jorwJ
G Hutvágner, PD Zamore - Current opinion in genetics & development, 2002 - Elsevier
… in the stem region that … males use an RNAi-like mechanism to degrade Stellate transcripts [67•]. When highly expressed in fly testes, the X-encoded Stellate protein renders males sterile. …
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Hutvágner, G., & Zamore, P. D. (2002). RNAi: nature abhors a double-strand. Current opinion in genetics & development, 12(2), 225-232.
Hutvágner, György, and Phillip D. Zamore. "RNAi: nature abhors a double-strand." Current opinion in genetics & development 12.2 (2002): 225-232.
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STEM education program evaluation
Rana S.
GSID: Pt34_3PDndcJ
D Hernandez, M Usselman, S Rana… - Journal of STEM …, 2018 - jstemoutreach.org
The purpose of this study is to thoroughly describe a program designed to strengthen the pipeline of Latino students into post-secondary science, technology, engineering, and mathematics (STEM) education, and present evaluation data to assess multiyear effectiveness. The program includes...
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Hernandez, D., Usselman, M., Rana, S., Alemdar, M., & Rao, A. (2018). Paving the road into college and STEM for Latino students. Journal of STEM Outreach, 1(1), 1-13.
Hernandez, Diley, et al. "Paving the road into college and STEM for Latino students." Journal of STEM Outreach 1.1 (2018): 1-13.
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pipeline programs
Ramirez‐Gonzalez RH.
GSID: WKub9mazGbsJ
RH Ramirez‐Gonzalez, V Segovia… - Plant biotechnology …, 2015 - Wiley Online Library
The identification of genetic markers linked to genes of agronomic importance is a major aim of crop research and breeding programmes. Here, we identify markers for Yr15, a major …
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Ramirez‐Gonzalez, R. H., Segovia, V., Bird, N., Fenwick, P., Holdgate, S., Berry, S., ... & Uauy, C. (2015). RNA‐S eq bulked segregant analysis enables the identification of high‐resolution genetic markers for breeding in hexaploid wheat. Plant biotechnology journal, 13(5), 613-624.
Ramirez‐Gonzalez, Ricardo H., et al. "RNA‐S eq bulked segregant analysis enables the identification of high‐resolution genetic markers for breeding in hexaploid wheat." Plant biotechnology journal 13.5 (2015): 613-624.
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pipeline programs
Gough J, Liu J, Rost B.
GSID: 7ZWNIlhuq5UJ
J Liu, J Gough, B Rost… - PLoS …, 2006 - journals.plos.org
RIKEN's FANTOM project has revealed many previously unknown coding sequences, as well as an unexpected degree of variation in transcripts resulting from alternative promoter …
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Liu, J., Gough, J., Rost, B., & PLoS Genetics EIC Wayne Frankel. (2006). Distinguishing protein-coding from non-coding RNAs through support vector machines. PLoS genetics, 2(4), e29.
Liu, Jinfeng, et al. "Distinguishing protein-coding from non-coding RNAs through support vector machines." PLoS genetics 2.4 (2006): e29.
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