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Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study.

Diabetologia

Downie CG, Dimos SF, Bien SA, Hu Y, Darst BF, Polfus LM, Wang Y, Wojcik GL, Tao R, Raffield LM, Armstrong ND, Polikowsky HG, Below JE, Correa A, Irvin MR, Rasmussen-Torvik LJF, Carlson CS, Phillips LS, Liu S, Pankow JS, Rich SS, Rotter JI, Buyske S, Matise TC, North KE, Avery CL, Haiman CA, Loos RJF, Kooperberg C, Graff M, Highland HM.
PMID: 34951656
Diabetologia. 2021 Dec 24; doi: 10.1007/s00125-021-05635-9. Epub 2021 Dec 24.

AIMS/HYPOTHESIS: Type 2 diabetes is a growing global public health challenge. Investigating quantitative traits, including fasting glucose, fasting insulin and HbAMETHODS: We conducted a GWAS of fasting glucose (n = 52,267), fasting insulin (n = 48,395) and HbARESULTS: Four...

Cite
Downie CG, Dimos SF, Bien SA, et al. Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study. Diabetologia. 2021;doi: 10.1007/s00125-021-05635-9.
Downie, C. G., Dimos, S. F., Bien, S. A., Hu, Y., Darst, B. F., Polfus, L. M., Wang, Y., Wojcik, G. L., Tao, R., Raffield, L. M., Armstrong, N. D., Polikowsky, H. G., Below, J. E., Correa, A., Irvin, M. R., Rasmussen-Torvik, L. J. F., Carlson, C. S., Phillips, L. S., Liu, S., Pankow, J. S., Rich, S. S., Rotter, J. I., Buyske, S., Matise, T. C., North, K. E., Avery, C. L., Haiman, C. A., Loos, R. J. F., Kooperberg, C., Graff, M., & Highland, H. M. (2021). Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study. Diabetologia, . https://doi.org/10.1007/s00125-021-05635-9
Downie, Carolina G, et al. "Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study." Diabetologia vol. (2021). doi: https://doi.org/10.1007/s00125-021-05635-9
Downie CG, Dimos SF, Bien SA, Hu Y, Darst BF, Polfus LM, Wang Y, Wojcik GL, Tao R, Raffield LM, Armstrong ND, Polikowsky HG, Below JE, Correa A, Irvin MR, Rasmussen-Torvik LJF, Carlson CS, Phillips LS, Liu S, Pankow JS, Rich SS, Rotter JI, Buyske S, Matise TC, North KE, Avery CL, Haiman CA, Loos RJF, Kooperberg C, Graff M, Highland HM. Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study. Diabetologia. 2021 Dec 24; doi: 10.1007/s00125-021-05635-9. Epub 2021 Dec 24. PMID: 34951656.
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Do Genetic Variants Modify the Effect of Smoking on Risk of Preeclampsia in Pregnancy?.

American journal of perinatology

Bauer AE, Avery CL, Shi M, Weinberg CR, Olshan AF, Harmon QE, Luo J, Yang J, Manuck T, Wu MC, Klungsøyr K, Trogstad L, Magnus P, Engel SM.
PMID: 34839469
Am J Perinatol. 2021 Nov 28; doi: 10.1055/s-0041-1740072. Epub 2021 Nov 28.

OBJECTIVE:  Maternal smoking is associated with as much as a 50% reduced risk of preeclampsia, despite increasing risk of other poor pregnancy outcomes that often co-occur with preeclampsia, such as preterm birth and fetal growth restriction. Researchers have long...

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Bauer AE, Avery CL, Shi M, et al. Do Genetic Variants Modify the Effect of Smoking on Risk of Preeclampsia in Pregnancy?. Am J Perinatol. 2021;doi: 10.1055/s-0041-1740072.
Bauer, A. E., Avery, C. L., Shi, M., Weinberg, C. R., Olshan, A. F., Harmon, Q. E., Luo, J., Yang, J., Manuck, T., Wu, M. C., Klungsøyr, K., Trogstad, L., Magnus, P., & Engel, S. M. (2021). Do Genetic Variants Modify the Effect of Smoking on Risk of Preeclampsia in Pregnancy?. American journal of perinatology, . https://doi.org/10.1055/s-0041-1740072
Bauer, Anna E, et al. "Do Genetic Variants Modify the Effect of Smoking on Risk of Preeclampsia in Pregnancy?." American journal of perinatology vol. (2021). doi: https://doi.org/10.1055/s-0041-1740072
Bauer AE, Avery CL, Shi M, Weinberg CR, Olshan AF, Harmon QE, Luo J, Yang J, Manuck T, Wu MC, Klungsøyr K, Trogstad L, Magnus P, Engel SM. Do Genetic Variants Modify the Effect of Smoking on Risk of Preeclampsia in Pregnancy?. Am J Perinatol. 2021 Nov 28; doi: 10.1055/s-0041-1740072. Epub 2021 Nov 28. PMID: 34839469.
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An aggressive CD4.

Veterinary and comparative oncology

Frankhouse KA, Rout ED, Hughes KL, Labadie JD, Yoshimoto JA, Lana SE, Avery PR, Avery AC.
PMID: 34792269
Vet Comp Oncol. 2021 Nov 18; doi: 10.1111/vco.12787. Epub 2021 Nov 18.

T-cell leukemia/lymphoma accounts for roughly 30% of all types of lymphoproliferative neoplasia in dogs. Two forms of T-cell lymphoma (T-zone and peripheral T-cell lymphoma) exhibit breed-specific predilections. During the course of routine immunophenotyping, we observed a breed-specific presentation of...

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Frankhouse KA, Rout ED, Hughes KL, et al. An aggressive CD4. Vet Comp Oncol. 2021;doi: 10.1111/vco.12787.
Frankhouse, K. A., Rout, E. D., Hughes, K. L., Labadie, J. D., Yoshimoto, J. A., Lana, S. E., Avery, P. R., & Avery, A. C. (2021). An aggressive CD4. Veterinary and comparative oncology, . https://doi.org/10.1111/vco.12787
Frankhouse, Kari A, et al. "An aggressive CD4." Veterinary and comparative oncology vol. (2021). doi: https://doi.org/10.1111/vco.12787
Frankhouse KA, Rout ED, Hughes KL, Labadie JD, Yoshimoto JA, Lana SE, Avery PR, Avery AC. An aggressive CD4. Vet Comp Oncol. 2021 Nov 18; doi: 10.1111/vco.12787. Epub 2021 Nov 18. PMID: 34792269.
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Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study.

Diabetologia

Downie CG, Dimos SF, Bien SA, Hu Y, Darst BF, Polfus LM, Wang Y, Wojcik GL, Tao R, Raffield LM, Armstrong ND, Polikowsky HG, Below JE, Correa A, Irvin MR, Rasmussen-Torvik LJF, Carlson CS, Phillips LS, Liu S, Pankow JS, Rich SS, Rotter JI, Buyske S, Matise TC, North KE, Avery CL, Haiman CA, Loos RJF, Kooperberg C, Graff M, Highland HM.
PMID: 34951656
Diabetologia. 2021 Dec 24; doi: 10.1007/s00125-021-05635-9. Epub 2021 Dec 24.

AIMS/HYPOTHESIS: Type 2 diabetes is a growing global public health challenge. Investigating quantitative traits, including fasting glucose, fasting insulin and HbAMETHODS: We conducted a GWAS of fasting glucose (n = 52,267), fasting insulin (n = 48,395) and HbARESULTS: Four...

Cite
Downie CG, Dimos SF, Bien SA, et al. Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study. Diabetologia. 2021;doi: 10.1007/s00125-021-05635-9.
Downie, C. G., Dimos, S. F., Bien, S. A., Hu, Y., Darst, B. F., Polfus, L. M., Wang, Y., Wojcik, G. L., Tao, R., Raffield, L. M., Armstrong, N. D., Polikowsky, H. G., Below, J. E., Correa, A., Irvin, M. R., Rasmussen-Torvik, L. J. F., Carlson, C. S., Phillips, L. S., Liu, S., Pankow, J. S., Rich, S. S., Rotter, J. I., Buyske, S., Matise, T. C., North, K. E., Avery, C. L., Haiman, C. A., Loos, R. J. F., Kooperberg, C., Graff, M., & Highland, H. M. (2021). Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study. Diabetologia, . https://doi.org/10.1007/s00125-021-05635-9
Downie, Carolina G, et al. "Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study." Diabetologia vol. (2021). doi: https://doi.org/10.1007/s00125-021-05635-9
Downie CG, Dimos SF, Bien SA, Hu Y, Darst BF, Polfus LM, Wang Y, Wojcik GL, Tao R, Raffield LM, Armstrong ND, Polikowsky HG, Below JE, Correa A, Irvin MR, Rasmussen-Torvik LJF, Carlson CS, Phillips LS, Liu S, Pankow JS, Rich SS, Rotter JI, Buyske S, Matise TC, North KE, Avery CL, Haiman CA, Loos RJF, Kooperberg C, Graff M, Highland HM. Multi-ethnic GWAS and fine-mapping of glycaemic traits identify novel loci in the PAGE Study. Diabetologia. 2021 Dec 24; doi: 10.1007/s00125-021-05635-9. Epub 2021 Dec 24. PMID: 34951656.
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Contribution of common chronic conditions to midlife physical function decline: The Study of Women's Health Across the Nation.

Women's midlife health

Lange-Maia BS, Karavolos K, Avery EF, Strotmeyer ES, Karvonen-Gutierrez CA, Appelhans BM, Janssen I, Dugan SA, Kravitz HM.
PMID: 32742664
Womens Midlife Health. 2020 Jul 28;6:6. doi: 10.1186/s40695-020-00053-0. eCollection 2020.

BACKGROUND: Chronic conditions are associated with worse physical function and commonly develop during midlife. We tested whether the presence of 8 chronic conditions, or the development of these conditions, is associated with declines in physical function among midlife women...

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Lange-Maia BS, Karavolos K, Avery EF, et al. Contribution of common chronic conditions to midlife physical function decline: The Study of Women's Health Across the Nation. Womens Midlife Health. 2020;6:6doi: 10.1186/s40695-020-00053-0.
Lange-Maia, B. S., Karavolos, K., Avery, E. F., Strotmeyer, E. S., Karvonen-Gutierrez, C. A., Appelhans, B. M., Janssen, I., Dugan, S. A., & Kravitz, H. M. (2020). Contribution of common chronic conditions to midlife physical function decline: The Study of Women's Health Across the Nation. Women's midlife health, 66. https://doi.org/10.1186/s40695-020-00053-0
Lange-Maia, Brittney S, et al. "Contribution of common chronic conditions to midlife physical function decline: The Study of Women's Health Across the Nation." Women's midlife health vol. 6 (2020): 6. doi: https://doi.org/10.1186/s40695-020-00053-0
Lange-Maia BS, Karavolos K, Avery EF, Strotmeyer ES, Karvonen-Gutierrez CA, Appelhans BM, Janssen I, Dugan SA, Kravitz HM. Contribution of common chronic conditions to midlife physical function decline: The Study of Women's Health Across the Nation. Womens Midlife Health. 2020 Jul 28;6:6. doi: 10.1186/s40695-020-00053-0. eCollection 2020. PMID: 32742664; PMCID: PMC7385881.
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Anterior hippocampal dysfunction in early psychosis: a 2-year follow-up study.

Psychological medicine

McHugo M, Avery S, Armstrong K, Rogers BP, Vandekar SN, Woodward ND, Blackford JU, Heckers S.
PMID: 33875028
Psychol Med. 2021 Apr 20;1-10. doi: 10.1017/S0033291721001318. Epub 2021 Apr 20.

BACKGROUND: Cross-sectional studies indicate that hippocampal function is abnormal across stages of psychosis. Neural theories of psychosis pathophysiology suggest that dysfunction worsens with illness stage. Here, we test the hypothesis that hippocampal function is impaired in the early stage...

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McHugo M, Avery S, Armstrong K, et al. Anterior hippocampal dysfunction in early psychosis: a 2-year follow-up study. Psychol Med. 2021;1-10doi: 10.1017/S0033291721001318.
McHugo, M., Avery, S., Armstrong, K., Rogers, B. P., Vandekar, S. N., Woodward, N. D., Blackford, J. U., & Heckers, S. (2021). Anterior hippocampal dysfunction in early psychosis: a 2-year follow-up study. Psychological medicine, 1-10. https://doi.org/10.1017/S0033291721001318
McHugo, Maureen, et al. "Anterior hippocampal dysfunction in early psychosis: a 2-year follow-up study." Psychological medicine vol. (2021): 1-10. doi: https://doi.org/10.1017/S0033291721001318
McHugo M, Avery S, Armstrong K, Rogers BP, Vandekar SN, Woodward ND, Blackford JU, Heckers S. Anterior hippocampal dysfunction in early psychosis: a 2-year follow-up study. Psychol Med. 2021 Apr 20;1-10. doi: 10.1017/S0033291721001318. Epub 2021 Apr 20. PMID: 33875028.
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Hungry scale worms: Phylogenetics of .

ZooKeys

Hatch AS, Liew H, Hourdez S, Rouse GW.
PMID: 32476973
Zookeys. 2020 May 12;932:27-74. doi: 10.3897/zookeys.932.48532. eCollection 2020.

Polynoidae Kinberg, 1856 has five branchiate genera:

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Hatch AS, Liew H, Hourdez S, et al. Hungry scale worms: Phylogenetics of . Zookeys. 2020;932:27-74doi: 10.3897/zookeys.932.48532.
Hatch, A. S., Liew, H., Hourdez, S., & Rouse, G. W. (2020). Hungry scale worms: Phylogenetics of . ZooKeys, 93227-74. https://doi.org/10.3897/zookeys.932.48532
Hatch, Avery S, et al. "Hungry scale worms: Phylogenetics of ." ZooKeys vol. 932 (2020): 27-74. doi: https://doi.org/10.3897/zookeys.932.48532
Hatch AS, Liew H, Hourdez S, Rouse GW. Hungry scale worms: Phylogenetics of . Zookeys. 2020 May 12;932:27-74. doi: 10.3897/zookeys.932.48532. eCollection 2020. PMID: 32476973; PMCID: PMC7237507.
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Updated prevalence, predictors and treatment outcomes for bronchiolitis obliterans syndrome after allogeneic stem cell transplantation.

Respiratory medicine

Pham J, Rangaswamy J, Avery S, Borg B, Martin C, Munsif M, Lin T, Dabscheck E.
PMID: 33383436
Respir Med. 2020 Dec 28;177:106286. doi: 10.1016/j.rmed.2020.106286. Epub 2020 Dec 28.

INTRODUCTION: Bronchiolitis obliterans syndrome (BOS) after allogeneic haemopoietic stem cell transplant (HSCT) is an under-recognised and difficult to treat disease. This occurs in the context of limited clinical research and inconsistent diagnostic criteria.METHOD: Retrospective data was collected on 275...

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Pham J, Rangaswamy J, Avery S, et al. Updated prevalence, predictors and treatment outcomes for bronchiolitis obliterans syndrome after allogeneic stem cell transplantation. Respir Med. 2020;177:106286doi: 10.1016/j.rmed.2020.106286.
Pham, J., Rangaswamy, J., Avery, S., Borg, B., Martin, C., Munsif, M., Lin, T., & Dabscheck, E. (2020). Updated prevalence, predictors and treatment outcomes for bronchiolitis obliterans syndrome after allogeneic stem cell transplantation. Respiratory medicine, 177106286. https://doi.org/10.1016/j.rmed.2020.106286
Pham, Jonathan, et al. "Updated prevalence, predictors and treatment outcomes for bronchiolitis obliterans syndrome after allogeneic stem cell transplantation." Respiratory medicine vol. 177 (2020): 106286. doi: https://doi.org/10.1016/j.rmed.2020.106286
Pham J, Rangaswamy J, Avery S, Borg B, Martin C, Munsif M, Lin T, Dabscheck E. Updated prevalence, predictors and treatment outcomes for bronchiolitis obliterans syndrome after allogeneic stem cell transplantation. Respir Med. 2020 Dec 28;177:106286. doi: 10.1016/j.rmed.2020.106286. Epub 2020 Dec 28. PMID: 33383436.
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The expansion of human T-bet.

Science immunology

Keller B, Strohmeier V, Harder I, Unger S, Payne KJ, Andrieux G, Boerries M, Felixberger PT, Landry JJM, Nieters A, Rensing-Ehl A, Salzer U, Frede N, Usadel S, Elling R, Speckmann C, Hainmann I, Ralph E, Gilmour K, Wentink MWJ, van der Burg M, Kuehn HS, Rosenzweig SD, Kölsch U, von Bernuth H, Kaiser-Labusch P, Gothe F, Hambleton S, Vlagea AD, Garcia Garcia A, Alsina L, Markelj G, Avcin T, Vasconcelos J, Guedes M, Ding JY, Ku CL, Shadur B, Avery DT, Venhoff N, Thiel J, Becker H, Erazo-Borrás L, Trujillo-Vargas CM, Franco JL, Fieschi C, Okada S, Gray PE, Uzel G, Casanova JL, Fliegauf M, Grimbacher B, Eibel H, Ehl S, Voll RE, Rizzi M, Stepensky P, Benes V, Ma CS, Bossen C, Tangye SG, Warnatz K.
PMID: 34623902
Sci Immunol. 2021 Oct 15;6(64):eabh0891. doi: 10.1126/sciimmunol.abh0891. Epub 2021 Oct 08.

[Figure: see text].

Cite
Keller B, Strohmeier V, Harder I, et al. The expansion of human T-bet. Sci Immunol. 2021;6(64):eabh0891doi: 10.1126/sciimmunol.abh0891.
Keller, B., Strohmeier, V., Harder, I., Unger, S., Payne, K. J., Andrieux, G., Boerries, M., Felixberger, P. T., Landry, J. J. M., Nieters, A., Rensing-Ehl, A., Salzer, U., Frede, N., Usadel, S., Elling, R., Speckmann, C., Hainmann, I., Ralph, E., Gilmour, K., Wentink, M. W. J., van der Burg, M., Kuehn, H. S., Rosenzweig, S. D., Kölsch, U., von Bernuth, H., Kaiser-Labusch, P., Gothe, F., Hambleton, S., Vlagea, A. D., Garcia Garcia, A., Alsina, L., Markelj, G., Avcin, T., Vasconcelos, J., Guedes, M., Ding, J. Y., Ku, C. L., Shadur, B., Avery, D. T., Venhoff, N., Thiel, J., Becker, H., Erazo-Borrás, L., Trujillo-Vargas, C. M., Franco, J. L., Fieschi, C., Okada, S., Gray, P. E., Uzel, G., Casanova, J. L., Fliegauf, M., Grimbacher, B., Eibel, H., Ehl, S., Voll, R. E., Rizzi, M., Stepensky, P., Benes, V., Ma, C. S., Bossen, C., Tangye, S. G., & Warnatz, K. (2021). The expansion of human T-bet. Science immunology, 6(64), eabh0891. https://doi.org/10.1126/sciimmunol.abh0891
Keller, Baerbel, et al. "The expansion of human T-bet." Science immunology vol. 6,64 (2021): eabh0891. doi: https://doi.org/10.1126/sciimmunol.abh0891
Keller B, Strohmeier V, Harder I, Unger S, Payne KJ, Andrieux G, Boerries M, Felixberger PT, Landry JJM, Nieters A, Rensing-Ehl A, Salzer U, Frede N, Usadel S, Elling R, Speckmann C, Hainmann I, Ralph E, Gilmour K, Wentink MWJ, van der Burg M, Kuehn HS, Rosenzweig SD, Kölsch U, von Bernuth H, Kaiser-Labusch P, Gothe F, Hambleton S, Vlagea AD, Garcia Garcia A, Alsina L, Markelj G, Avcin T, Vasconcelos J, Guedes M, Ding JY, Ku CL, Shadur B, Avery DT, Venhoff N, Thiel J, Becker H, Erazo-Borrás L, Trujillo-Vargas CM, Franco JL, Fieschi C, Okada S, Gray PE, Uzel G, Casanova JL, Fliegauf M, Grimbacher B, Eibel H, Ehl S, Voll RE, Rizzi M, Stepensky P, Benes V, Ma CS, Bossen C, Tangye SG, Warnatz K. The expansion of human T-bet. Sci Immunol. 2021 Oct 15;6(64):eabh0891. doi: 10.1126/sciimmunol.abh0891. Epub 2021 Oct 08. PMID: 34623902.
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The expansion of human T-bet.

Science immunology

Keller B, Strohmeier V, Harder I, Unger S, Payne KJ, Andrieux G, Boerries M, Felixberger PT, Landry JJM, Nieters A, Rensing-Ehl A, Salzer U, Frede N, Usadel S, Elling R, Speckmann C, Hainmann I, Ralph E, Gilmour K, Wentink MWJ, van der Burg M, Kuehn HS, Rosenzweig SD, Kölsch U, von Bernuth H, Kaiser-Labusch P, Gothe F, Hambleton S, Vlagea AD, Garcia Garcia A, Alsina L, Markelj G, Avcin T, Vasconcelos J, Guedes M, Ding JY, Ku CL, Shadur B, Avery DT, Venhoff N, Thiel J, Becker H, Erazo-Borrás L, Trujillo-Vargas CM, Franco JL, Fieschi C, Okada S, Gray PE, Uzel G, Casanova JL, Fliegauf M, Grimbacher B, Eibel H, Ehl S, Voll RE, Rizzi M, Stepensky P, Benes V, Ma CS, Bossen C, Tangye SG, Warnatz K.
PMID: 34623902
Sci Immunol. 2021 Oct 15;6(64):eabh0891. doi: 10.1126/sciimmunol.abh0891. Epub 2021 Oct 08.

[Figure: see text].

Cite
Keller B, Strohmeier V, Harder I, et al. The expansion of human T-bet. Sci Immunol. 2021;6(64):eabh0891doi: 10.1126/sciimmunol.abh0891.
Keller, B., Strohmeier, V., Harder, I., Unger, S., Payne, K. J., Andrieux, G., Boerries, M., Felixberger, P. T., Landry, J. J. M., Nieters, A., Rensing-Ehl, A., Salzer, U., Frede, N., Usadel, S., Elling, R., Speckmann, C., Hainmann, I., Ralph, E., Gilmour, K., Wentink, M. W. J., van der Burg, M., Kuehn, H. S., Rosenzweig, S. D., Kölsch, U., von Bernuth, H., Kaiser-Labusch, P., Gothe, F., Hambleton, S., Vlagea, A. D., Garcia Garcia, A., Alsina, L., Markelj, G., Avcin, T., Vasconcelos, J., Guedes, M., Ding, J. Y., Ku, C. L., Shadur, B., Avery, D. T., Venhoff, N., Thiel, J., Becker, H., Erazo-Borrás, L., Trujillo-Vargas, C. M., Franco, J. L., Fieschi, C., Okada, S., Gray, P. E., Uzel, G., Casanova, J. L., Fliegauf, M., Grimbacher, B., Eibel, H., Ehl, S., Voll, R. E., Rizzi, M., Stepensky, P., Benes, V., Ma, C. S., Bossen, C., Tangye, S. G., & Warnatz, K. (2021). The expansion of human T-bet. Science immunology, 6(64), eabh0891. https://doi.org/10.1126/sciimmunol.abh0891
Keller, Baerbel, et al. "The expansion of human T-bet." Science immunology vol. 6,64 (2021): eabh0891. doi: https://doi.org/10.1126/sciimmunol.abh0891
Keller B, Strohmeier V, Harder I, Unger S, Payne KJ, Andrieux G, Boerries M, Felixberger PT, Landry JJM, Nieters A, Rensing-Ehl A, Salzer U, Frede N, Usadel S, Elling R, Speckmann C, Hainmann I, Ralph E, Gilmour K, Wentink MWJ, van der Burg M, Kuehn HS, Rosenzweig SD, Kölsch U, von Bernuth H, Kaiser-Labusch P, Gothe F, Hambleton S, Vlagea AD, Garcia Garcia A, Alsina L, Markelj G, Avcin T, Vasconcelos J, Guedes M, Ding JY, Ku CL, Shadur B, Avery DT, Venhoff N, Thiel J, Becker H, Erazo-Borrás L, Trujillo-Vargas CM, Franco JL, Fieschi C, Okada S, Gray PE, Uzel G, Casanova JL, Fliegauf M, Grimbacher B, Eibel H, Ehl S, Voll RE, Rizzi M, Stepensky P, Benes V, Ma CS, Bossen C, Tangye SG, Warnatz K. The expansion of human T-bet. Sci Immunol. 2021 Oct 15;6(64):eabh0891. doi: 10.1126/sciimmunol.abh0891. Epub 2021 Oct 08. PMID: 34623902.
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CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-seq Analysis.

Genomics, proteomics & bioinformatics

Qiu X, Feit AS, Feiglin A, Xie Y, Kesten N, Taing L, Perkins J, Gu S, Li Y, Cejas P, Zhou N, Jeselsohn R, Brown M, Shirley Liu X, Long HW.
PMID: 34284136
Genomics Proteomics Bioinformatics. 2021 Jul 17; doi: 10.1016/j.gpb.2020.11.007. Epub 2021 Jul 17.

Chromatin immunoprecipitation sequencing (ChIP-seq) and the Assay for Transposase-Accessible Chromatin with high-throughput sequencing (ATAC-seq) have become essential technologies to effectively measure protein-DNA interactions and chromatin accessibility. However, there is a need for a scalable and reproducible pipeline that incorporates...

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Qiu X, Feit AS, Feiglin A, et al. CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-seq Analysis. Genomics Proteomics Bioinformatics. 2021;doi: 10.1016/j.gpb.2020.11.007.
Qiu, X., Feit, A. S., Feiglin, A., Xie, Y., Kesten, N., Taing, L., Perkins, J., Gu, S., Li, Y., Cejas, P., Zhou, N., Jeselsohn, R., Brown, M., Shirley Liu, X., & Long, H. W. (2021). CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-seq Analysis. Genomics, proteomics & bioinformatics, . https://doi.org/10.1016/j.gpb.2020.11.007
Qiu, Xintao, et al. "CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-seq Analysis." Genomics, proteomics & bioinformatics vol. (2021). doi: https://doi.org/10.1016/j.gpb.2020.11.007
Qiu X, Feit AS, Feiglin A, Xie Y, Kesten N, Taing L, Perkins J, Gu S, Li Y, Cejas P, Zhou N, Jeselsohn R, Brown M, Shirley Liu X, Long HW. CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-seq Analysis. Genomics Proteomics Bioinformatics. 2021 Jul 17; doi: 10.1016/j.gpb.2020.11.007. Epub 2021 Jul 17. PMID: 34284136.
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Changes in physical activity levels and mental health during COVID-19: Prospective findings among adult twin pairs.

PloS one

Duncan GE, Avery AR, Tsang S, Williams BD, Seto E.
PMID: 34807944
PLoS One. 2021 Nov 22;16(11):e0260218. doi: 10.1371/journal.pone.0260218. eCollection 2021.

BACKGROUND: Physical distancing and other COVID-19 pandemic mitigation strategies have negatively impacted physical activity (PA) levels and mental health in cross-sectional studies. The purpose of this study was to investigate associations between changes in PA and mental health outcomes...

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Duncan GE, Avery AR, Tsang S, et al. Changes in physical activity levels and mental health during COVID-19: Prospective findings among adult twin pairs. PLoS One. 2021;16(11):e0260218doi: 10.1371/journal.pone.0260218.
Duncan, G. E., Avery, A. R., Tsang, S., Williams, B. D., & Seto, E. (2021). Changes in physical activity levels and mental health during COVID-19: Prospective findings among adult twin pairs. PloS one, 16(11), e0260218. https://doi.org/10.1371/journal.pone.0260218
Duncan, Glen E, et al. "Changes in physical activity levels and mental health during COVID-19: Prospective findings among adult twin pairs." PloS one vol. 16,11 (2021): e0260218. doi: https://doi.org/10.1371/journal.pone.0260218
Duncan GE, Avery AR, Tsang S, Williams BD, Seto E. Changes in physical activity levels and mental health during COVID-19: Prospective findings among adult twin pairs. PLoS One. 2021 Nov 22;16(11):e0260218. doi: 10.1371/journal.pone.0260218. eCollection 2021. PMID: 34807944; PMCID: PMC8608318.
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