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Board 89: Broadening Participation in Engineering by Enhancing Community College to University Partnerships: Findings from a Tri-institutional NSF Grant …

Broadening participation

Lee WC, Grote DM, Knight DB.
GSID: 0KHSe2YYf3wJ
WC Lee, DM Grote, DB Knight, AR Erwin… - 2019 ASEE Annual …, 2019 - peer.asee.org

Dr. Walter Lee is an assistant professor in the Department of Engineering Education and the assistant director for research in the Center for the Enhancement of Engineering Diversity (CEED), both at Virginia Tech. His research interests include co-curricular support,...

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Lee, W. C., Grote, D. M., Knight, D. B., Erwin, A. R., & Watford, B. A. (2019, June). Board 89: Broadening Participation in Engineering by Enhancing Community College to University Partnerships: Findings from a Tri-institutional NSF Grant Partnership. In 2019 ASEE Annual Conference & Exposition.
Lee, Walter C., et al. "Board 89: Broadening Participation in Engineering by Enhancing Community College to University Partnerships: Findings from a Tri-institutional NSF Grant Partnership." 2019 ASEE Annual Conference & Exposition. 2019.
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Multiple starting lines: Pre-college characteristics of community college and four-year institution engineering students

pre-college

Knight DB, Bergom IM.
GSID: mioIA_y-9L8J
DB Knight, IM Bergom, BA Burt… - 2014 ASEE Annual …, 2014 - peer.asee.org

… the “pre-college characteristics” component of the framework, where we define “pre-college” as … In Table 2 we list the types of “pre-college” variables used in our analyses and note their …

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Knight, D. B., Bergom, I. M., Burt, B. A., & Lattuca, L. R. (2014, June). Multiple starting lines: Pre-college characteristics of community college and four-year institution engineering students. In 2014 ASEE Annual Conference & Exposition (pp. 24-926).
Knight, David B., et al. "Multiple starting lines: Pre-college characteristics of community college and four-year institution engineering students." 2014 ASEE Annual Conference & Exposition. 2014.
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Survival and Function of Transplanted Islet Cells on an in Vivo, Vascularized Tissue Engineering Platform in the Rat: A Pilot Study 1.

Cell transplantation

Brown DL, Meagher PJ, Knight KR, Keramidaris E, Romeo-Meeuw R, Penington AJ, Morrison WA.
PMID: 28863745
Cell Transplant. 2006 Apr;15(4):319-324. doi: 10.3727/000000006783981909.

As in vivo tissue engineering of complex tissues and organs progresses, there is a need for an independently vascularized, alterable, and recoverable model. Current models of islet cell transplantation (release into the portal venous system, placement under the renal...

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Brown DL, Meagher PJ, Knight KR, et al. Survival and Function of Transplanted Islet Cells on an in Vivo, Vascularized Tissue Engineering Platform in the Rat: A Pilot Study 1. Cell Transplant. 2006;15(4):319-324doi: 10.3727/000000006783981909.
Brown, D. L., Meagher, P. J., Knight, K. R., Keramidaris, E., Romeo-Meeuw, R., Penington, A. J., & Morrison, W. A. (2006). Survival and Function of Transplanted Islet Cells on an in Vivo, Vascularized Tissue Engineering Platform in the Rat: A Pilot Study 1. Cell transplantation, 15(4), 319-324. https://doi.org/10.3727/000000006783981909
Brown, David L, et al. "Survival and Function of Transplanted Islet Cells on an in Vivo, Vascularized Tissue Engineering Platform in the Rat: A Pilot Study 1." Cell transplantation vol. 15,4 (2006): 319-324. doi: https://doi.org/10.3727/000000006783981909
Brown DL, Meagher PJ, Knight KR, Keramidaris E, Romeo-Meeuw R, Penington AJ, Morrison WA. Survival and Function of Transplanted Islet Cells on an in Vivo, Vascularized Tissue Engineering Platform in the Rat: A Pilot Study 1. Cell Transplant. 2006 Apr;15(4):319-324. doi: 10.3727/000000006783981909. PMID: 28863745.
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How to Synthesise High Purity, Crystalline d-Glucaric Acid Selectively.

European journal of organic chemistry

Armstrong RD, Kariuki BM, Knight DW, Hutchings GJ.
PMID: 29576740
European J Org Chem. 2017 Dec 08;2017(45):6811-6814. doi: 10.1002/ejoc.201701343. Epub 2017 Dec 06.

Glucaric acid has potential applications in food, pharmaceutical and polymer industries yet no methodology exists within the public domain for isolation of this key bio-derived platform molecule as a pure, crystalline solid. Here we demonstrate the difficulties, which arise...

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Armstrong RD, Kariuki BM, Knight DW, et al. How to Synthesise High Purity, Crystalline d-Glucaric Acid Selectively. European J Org Chem. 2017;2017(45):6811-6814doi: 10.1002/ejoc.201701343.
Armstrong, R. D., Kariuki, B. M., Knight, D. W., & Hutchings, G. J. (2017). How to Synthesise High Purity, Crystalline d-Glucaric Acid Selectively. European journal of organic chemistry, 2017(45), 6811-6814. https://doi.org/10.1002/ejoc.201701343
Armstrong, Robert D, et al. "How to Synthesise High Purity, Crystalline d-Glucaric Acid Selectively." European journal of organic chemistry vol. 2017,45 (2017): 6811-6814. doi: https://doi.org/10.1002/ejoc.201701343
Armstrong RD, Kariuki BM, Knight DW, Hutchings GJ. How to Synthesise High Purity, Crystalline d-Glucaric Acid Selectively. European J Org Chem. 2017 Dec 08;2017(45):6811-6814. doi: 10.1002/ejoc.201701343. Epub 2017 Dec 06. PMID: 29576740; PMCID: PMC5861666.
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KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples.

mSystems

Minich JJ, Zhu Q, Janssen S, Hendrickson R, Amir A, Vetter R, Hyde J, Doty MM, Stillwell K, Benardini J, Kim JH, Allen EE, Venkateswaran K, Knight R.
PMID: 29577086
mSystems. 2018 Mar 13;3(3). doi: 10.1128/mSystems.00218-17. eCollection 2018.

Microbiome analyses of low-biomass samples are challenging because of contamination and inefficiencies, leading many investigators to employ low-throughput methods with minimal controls. We developed a new automated protocol, KatharoSeq (from the Greek katharos [clean]), that outperforms single-tube extractions while...

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Minich JJ, Zhu Q, Janssen S, et al. KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples. mSystems. 2018;3(3)doi: 10.1128/mSystems.00218-17.
Minich, J. J., Zhu, Q., Janssen, S., Hendrickson, R., Amir, A., Vetter, R., Hyde, J., Doty, M. M., Stillwell, K., Benardini, J., Kim, J. H., Allen, E. E., Venkateswaran, K., & Knight, R. (2018). KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples. mSystems, 3(3), . https://doi.org/10.1128/mSystems.00218-17
Minich, Jeremiah J, et al. "KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples." mSystems vol. 3,3 (2018). doi: https://doi.org/10.1128/mSystems.00218-17
Minich JJ, Zhu Q, Janssen S, Hendrickson R, Amir A, Vetter R, Hyde J, Doty MM, Stillwell K, Benardini J, Kim JH, Allen EE, Venkateswaran K, Knight R. KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples. mSystems. 2018 Mar 13;3(3). doi: 10.1128/mSystems.00218-17. eCollection 2018. PMID: 29577086; PMCID: PMC5864415.
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Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity.

Microbiome

He Y, Caporaso JG, Jiang XT, Sheng HF, Huse SM, Rideout JR, Edgar RC, Kopylova E, Walters WA, Knight R, Zhou HW.
PMID: 25995836
Microbiome. 2015 May 20;3:20. doi: 10.1186/s40168-015-0081-x. eCollection 2015.

BACKGROUND: The operational taxonomic unit (OTU) is widely used in microbial ecology. Reproducibility in microbial ecology research depends on the reliability of OTU-based 16S ribosomal subunit RNA (rRNA) analyses.RESULTS: Here, we report that many hierarchical and greedy clustering methods...

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He Y, Caporaso JG, Jiang XT, et al. Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity. Microbiome. 2015;3:20doi: 10.1186/s40168-015-0081-x.
He, Y., Caporaso, J. G., Jiang, X. T., Sheng, H. F., Huse, S. M., Rideout, J. R., Edgar, R. C., Kopylova, E., Walters, W. A., Knight, R., & Zhou, H. W. (2015). Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity. Microbiome, 320. https://doi.org/10.1186/s40168-015-0081-x
He, Yan, et al. "Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity." Microbiome vol. 3 (2015): 20. doi: https://doi.org/10.1186/s40168-015-0081-x
He Y, Caporaso JG, Jiang XT, Sheng HF, Huse SM, Rideout JR, Edgar RC, Kopylova E, Walters WA, Knight R, Zhou HW. Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity. Microbiome. 2015 May 20;3:20. doi: 10.1186/s40168-015-0081-x. eCollection 2015. PMID: 25995836; PMCID: PMC4438525.
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GLS2 is transcriptionally regulated by p73 and contributes to neuronal differentiation.

Cell cycle (Georgetown, Tex.)

Velletri T, Romeo F, Tucci P, Peschiaroli A, Annicchiarico-Petruzzelli M, Niklison-Chirou M, Amelio I, Knight R, Mak T, Melino G, Agostini M.
PMID: 25997017
Cell Cycle. 2015;14(10):1611-2. doi: 10.1080/15384101.2015.1035968.

No abstract available.

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Velletri T, Romeo F, Tucci P, et al. GLS2 is transcriptionally regulated by p73 and contributes to neuronal differentiation. Cell Cycle. 2015;14(10):1611-2doi: 10.1080/15384101.2015.1035968.
Velletri, T., Romeo, F., Tucci, P., Peschiaroli, A., Annicchiarico-Petruzzelli, M., Niklison-Chirou, M., Amelio, I., Knight, R., Mak, T., Melino, G., & Agostini, M. (2015). GLS2 is transcriptionally regulated by p73 and contributes to neuronal differentiation. Cell cycle (Georgetown, Tex.), 14(10), 1611-2. https://doi.org/10.1080/15384101.2015.1035968
Velletri, Tania, et al. "GLS2 is transcriptionally regulated by p73 and contributes to neuronal differentiation." Cell cycle (Georgetown, Tex.) vol. 14,10 (2015): 1611-2. doi: https://doi.org/10.1080/15384101.2015.1035968
Velletri T, Romeo F, Tucci P, Peschiaroli A, Annicchiarico-Petruzzelli M, Niklison-Chirou M, Amelio I, Knight R, Mak T, Melino G, Agostini M. GLS2 is transcriptionally regulated by p73 and contributes to neuronal differentiation. Cell Cycle. 2015;14(10):1611-2. doi: 10.1080/15384101.2015.1035968. PMID: 25997017; PMCID: PMC4615081.
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Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin.

Frontiers in microbiology

Loudon AH, Venkataraman A, Van Treuren W, Woodhams DC, Parfrey LW, McKenzie VJ, Knight R, Schmidt TM, Harris RN.
PMID: 27014249
Front Microbiol. 2016 Mar 16;7:333. doi: 10.3389/fmicb.2016.00333. eCollection 2016.

Skin bacterial communities can protect amphibians from a fungal pathogen; however, little is known about how these communities are maintained. We used a neutral model of community ecology to identify bacteria that are maintained on salamanders by selection or...

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Loudon AH, Venkataraman A, Van Treuren W, et al. Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin. Front Microbiol. 2016;7:333doi: 10.3389/fmicb.2016.00333.
Loudon, A. H., Venkataraman, A., Van Treuren, W., Woodhams, D. C., Parfrey, L. W., McKenzie, V. J., Knight, R., Schmidt, T. M., & Harris, R. N. (2016). Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin. Frontiers in microbiology, 7333. https://doi.org/10.3389/fmicb.2016.00333
Loudon, Andrew H, et al. "Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin." Frontiers in microbiology vol. 7 (2016): 333. doi: https://doi.org/10.3389/fmicb.2016.00333
Loudon AH, Venkataraman A, Van Treuren W, Woodhams DC, Parfrey LW, McKenzie VJ, Knight R, Schmidt TM, Harris RN. Vertebrate Hosts as Islands: Dynamics of Selection, Immigration, Loss, Persistence, and Potential Function of Bacteria on Salamander Skin. Front Microbiol. 2016 Mar 16;7:333. doi: 10.3389/fmicb.2016.00333. eCollection 2016. PMID: 27014249; PMCID: PMC4793798.
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Diagnosis and assessment of dilated cardiomyopathy: a guideline protocol from the British Society of Echocardiography.

Echo research and practice

Mathew T, Williams L, Navaratnam G, Rana B, Wheeler R, Collins K, Harkness A, Jones R, Knight D, O'Gallagher K, Oxborough D, Ring L, Sandoval J, Stout M, Sharma V, Steeds RP.
PMID: 28592613
Echo Res Pract. 2017 Jun;4(2):G1-G13. doi: 10.1530/ERP-16-0037.

Heart failure (HF) is a debilitating and life-threatening condition, with 5-year survival rate lower than breast or prostate cancer. It is the leading cause of hospital admission in over 65s, and these admissions are projected to rise by more...

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Mathew T, Williams L, Navaratnam G, et al. Diagnosis and assessment of dilated cardiomyopathy: a guideline protocol from the British Society of Echocardiography. Echo Res Pract. 2017;4(2):G1-G13doi: 10.1530/ERP-16-0037.
Mathew, T., Williams, L., Navaratnam, G., Rana, B., Wheeler, R., Collins, K., Harkness, A., Jones, R., Knight, D., O'Gallagher, K., Oxborough, D., Ring, L., Sandoval, J., Stout, M., Sharma, V., Steeds, R. P. (2017). Diagnosis and assessment of dilated cardiomyopathy: a guideline protocol from the British Society of Echocardiography. Echo research and practice, 4(2), G1-G13. https://doi.org/10.1530/ERP-16-0037
Mathew, Thomas, et al. "Diagnosis and assessment of dilated cardiomyopathy: a guideline protocol from the British Society of Echocardiography." Echo research and practice vol. 4,2 (2017): G1-G13. doi: https://doi.org/10.1530/ERP-16-0037
Mathew T, Williams L, Navaratnam G, Rana B, Wheeler R, Collins K, Harkness A, Jones R, Knight D, O'Gallagher K, Oxborough D, Ring L, Sandoval J, Stout M, Sharma V, Steeds RP. Diagnosis and assessment of dilated cardiomyopathy: a guideline protocol from the British Society of Echocardiography. Echo Res Pract. 2017 Jun;4(2):G1-G13. doi: 10.1530/ERP-16-0037. PMID: 28592613; PMCID: PMC5574280.
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Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project.

Journal of microbiology & biology education

Debelius JW, Vázquez-Baeza Y, McDonald D, Xu Z, Wolfe E, Knight R.
PMID: 27047589
J Microbiol Biol Educ. 2016 Mar 01;17(1):46-50. doi: 10.1128/jmbe.v17i1.1034. eCollection 2016 Mar.

The role of the human microbiome is the subject of continued investigation resulting in increased understanding. However, current microbiome research has only scratched the surface of the variety of healthy microbiomes. Public participation in science through crowdsourcing and crowdfunding...

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Debelius JW, Vázquez-Baeza Y, McDonald D, et al. Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project. J Microbiol Biol Educ. 2016;17(1):46-50doi: 10.1128/jmbe.v17i1.1034.
Debelius, J. W., Vázquez-Baeza, Y., McDonald, D., Xu, Z., Wolfe, E., & Knight, R. (2016). Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project. Journal of microbiology & biology education, 17(1), 46-50. https://doi.org/10.1128/jmbe.v17i1.1034
Debelius, Justine W, et al. "Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project." Journal of microbiology & biology education vol. 17,1 (2016): 46-50. doi: https://doi.org/10.1128/jmbe.v17i1.1034
Debelius JW, Vázquez-Baeza Y, McDonald D, Xu Z, Wolfe E, Knight R. Turning Participatory Microbiome Research into Usable Data: Lessons from the American Gut Project. J Microbiol Biol Educ. 2016 Mar 01;17(1):46-50. doi: 10.1128/jmbe.v17i1.1034. eCollection 2016 Mar. PMID: 27047589; PMCID: PMC4798814.
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Extramammary Paget disease of the perianal region: the potential role of imiquimod in achieving disease control.

Journal of surgical case reports

Knight SR, Proby C, Ziyaie D, Carey F, Koch S.
PMID: 27511910
J Surg Case Rep. 2016 Aug 10;2016(8). doi: 10.1093/jscr/rjw110.

Extramammary Paget disease (EMPD) is a rare perineal neoplasia associated with a high rate of local recurrence. Surgical excision is the standard treatment; however, this has high rates of post-operative morbidity in combination with potentially mutilating results. Previous literature...

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Knight SR, Proby C, Ziyaie D, et al. Extramammary Paget disease of the perianal region: the potential role of imiquimod in achieving disease control. J Surg Case Rep. 2016;2016(8)doi: 10.1093/jscr/rjw110.
Knight, S. R., Proby, C., Ziyaie, D., Carey, F., & Koch, S. (2016). Extramammary Paget disease of the perianal region: the potential role of imiquimod in achieving disease control. Journal of surgical case reports, 2016(8), . https://doi.org/10.1093/jscr/rjw110
Knight, Stephen R, et al. "Extramammary Paget disease of the perianal region: the potential role of imiquimod in achieving disease control." Journal of surgical case reports vol. 2016,8 (2016). doi: https://doi.org/10.1093/jscr/rjw110
Knight SR, Proby C, Ziyaie D, Carey F, Koch S. Extramammary Paget disease of the perianal region: the potential role of imiquimod in achieving disease control. J Surg Case Rep. 2016 Aug 10;2016(8). doi: 10.1093/jscr/rjw110. PMID: 27511910; PMCID: PMC4979531.
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A population of Pax7-expressing muscle progenitor cells show differential responses to muscle injury dependent on developmental stage and injury extent.

Frontiers in aging neuroscience

Knappe S, Zammit PS, Knight RD.
PMID: 26379543
Front Aging Neurosci. 2015 Aug 25;7:161. doi: 10.3389/fnagi.2015.00161. eCollection 2015.

Skeletal muscle regeneration in vertebrates occurs by the activation of quiescent progenitor cells that express pax7 to repair and replace damaged myofibers. We have developed a mechanical injury paradigm in zebrafish to determine whether developmental stage and injury size...

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Knappe S, Zammit PS, Knight RD. A population of Pax7-expressing muscle progenitor cells show differential responses to muscle injury dependent on developmental stage and injury extent. Front Aging Neurosci. 2015;7:161doi: 10.3389/fnagi.2015.00161.
Knappe, S., Zammit, P. S., & Knight, R. D. (2015). A population of Pax7-expressing muscle progenitor cells show differential responses to muscle injury dependent on developmental stage and injury extent. Frontiers in aging neuroscience, 7161. https://doi.org/10.3389/fnagi.2015.00161
Knappe, Stefanie, et al. "A population of Pax7-expressing muscle progenitor cells show differential responses to muscle injury dependent on developmental stage and injury extent." Frontiers in aging neuroscience vol. 7 (2015): 161. doi: https://doi.org/10.3389/fnagi.2015.00161
Knappe S, Zammit PS, Knight RD. A population of Pax7-expressing muscle progenitor cells show differential responses to muscle injury dependent on developmental stage and injury extent. Front Aging Neurosci. 2015 Aug 25;7:161. doi: 10.3389/fnagi.2015.00161. eCollection 2015. PMID: 26379543; PMCID: PMC4548158.
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