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Claudin and ovarian cancer.

Journal of the Turkish German Gynecological Association

Bose CK, Mukhopadhyay A.
PMID: 24591894
J Turk Ger Gynecol Assoc. 2010 Mar 01;11(1):48-54. eCollection 2010.

Claudins are a family of proteins and the most important component of the tight junction. They constitute a paracellular barrier that controls the flow of molecules in the intercellular space of an epithelium. Although it seems that claudin should...

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Bose CK, Mukhopadhyay A. Claudin and ovarian cancer. J Turk Ger Gynecol Assoc. 2010;11(1):48-54
Bose, C. K., & Mukhopadhyay, A. (2010). Claudin and ovarian cancer. Journal of the Turkish German Gynecological Association, 11(1), 48-54.
Bose, Chinmoy K, and Mukhopadhyay, Ashis. "Claudin and ovarian cancer." Journal of the Turkish German Gynecological Association vol. 11,1 (2010): 48-54.
Bose CK, Mukhopadhyay A. Claudin and ovarian cancer. J Turk Ger Gynecol Assoc. 2010 Mar 01;11(1):48-54. eCollection 2010. PMID: 24591894; PMCID: PMC3939305.
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Transmission of organelles in triploid hybrids produced by gametosomatic fusions of two Nicotiana species.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Pental D, Pradhan AK, Mukhopadhyay A.
PMID: 24225684
Theor Appl Genet. 1989 Oct;78(4):547-52. doi: 10.1007/BF00290841.

Gametosomatic hybrids produced by the fusion of microspore protoplasts of Nicotiana tabacum Km(+)Sr(+) with somatic cell protoplasts of N. rustica were analysed for their organelle composition. For the analysis of mitochondrial (mt)DNA, species-specific patterns were generated by Southern hybridization...

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Pental D, Pradhan AK, Mukhopadhyay A. Transmission of organelles in triploid hybrids produced by gametosomatic fusions of two Nicotiana species. Theor Appl Genet. 1989;78(4):547-52doi: 10.1007/BF00290841.
Pental, D., Pradhan, A. K., & Mukhopadhyay, A. (1989). Transmission of organelles in triploid hybrids produced by gametosomatic fusions of two Nicotiana species. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 78(4), 547-52. https://doi.org/10.1007/BF00290841
Pental, D, et al. "Transmission of organelles in triploid hybrids produced by gametosomatic fusions of two Nicotiana species." TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik vol. 78,4 (1989): 547-52. doi: https://doi.org/10.1007/BF00290841
Pental D, Pradhan AK, Mukhopadhyay A. Transmission of organelles in triploid hybrids produced by gametosomatic fusions of two Nicotiana species. Theor Appl Genet. 1989 Oct;78(4):547-52. doi: 10.1007/BF00290841. PMID: 24225684.
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Small Colony variants of Staphylococcus aureus isolated from a patient with infective endocarditis: a case report and review of the literature.

Iranian journal of microbiology

Bhattacharyya S, Roy S, Mukhopadhyay P, Rit K, Dey J, Ganguly U, Ray R.
PMID: 22973477
Iran J Microbiol. 2012 Jun;4(2):98-9.

Staphylococcus aureus produces a particular morphological variant called small colony variant (SCV) which is responsible for persistent subclinical infections in predisposed individuals and is usually resistant to aminoglycosides and cell wall active antibiotics. Infections by SCV of S. aureus...

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Bhattacharyya S, Roy S, Mukhopadhyay P, et al. Small Colony variants of Staphylococcus aureus isolated from a patient with infective endocarditis: a case report and review of the literature. Iran J Microbiol. 2012;4(2):98-9
Bhattacharyya, S., Roy, S., Mukhopadhyay, P., Rit, K., Dey, J., Ganguly, U., & Ray, R. (2012). Small Colony variants of Staphylococcus aureus isolated from a patient with infective endocarditis: a case report and review of the literature. Iranian journal of microbiology, 4(2), 98-9.
Bhattacharyya, S, et al. "Small Colony variants of Staphylococcus aureus isolated from a patient with infective endocarditis: a case report and review of the literature." Iranian journal of microbiology vol. 4,2 (2012): 98-9.
Bhattacharyya S, Roy S, Mukhopadhyay P, Rit K, Dey J, Ganguly U, Ray R. Small Colony variants of Staphylococcus aureus isolated from a patient with infective endocarditis: a case report and review of the literature. Iran J Microbiol. 2012 Jun;4(2):98-9. PMID: 22973477; PMCID: PMC3434649.
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Effect of hyperammonemia on brain amino acids in young and adult ferrets.

Amino acids

Deshmukh DR, Mukhopadhyay A, Sarnaik AP, Portoles M.
PMID: 24190672
Amino Acids. 1993 Jun;5(2):289-97. doi: 10.1007/BF00805991.

Effects of arginine deficiency and hyperammonemia on the brain concentrations of amino acids and urea cycle enzyme activities in young and adult ferrets were investigated. Only young ferrets developed hyperammonemia and encephalopathy immediately after consuming the arginine-free diet. Brain...

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Deshmukh DR, Mukhopadhyay A, Sarnaik AP, et al. Effect of hyperammonemia on brain amino acids in young and adult ferrets. Amino Acids. 1993;5(2):289-97doi: 10.1007/BF00805991.
Deshmukh, D. R., Mukhopadhyay, A., Sarnaik, A. P., & Portoles, M. (1993). Effect of hyperammonemia on brain amino acids in young and adult ferrets. Amino acids, 5(2), 289-97. https://doi.org/10.1007/BF00805991
Deshmukh, D R, et al. "Effect of hyperammonemia on brain amino acids in young and adult ferrets." Amino acids vol. 5,2 (1993): 289-97. doi: https://doi.org/10.1007/BF00805991
Deshmukh DR, Mukhopadhyay A, Sarnaik AP, Portoles M. Effect of hyperammonemia on brain amino acids in young and adult ferrets. Amino Acids. 1993 Jun;5(2):289-97. doi: 10.1007/BF00805991. PMID: 24190672.
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Diseases of pigeon in and around Kolkata, India.

Journal of parasitic diseases : official organ of the Indian Society for Parasitology

Dandapat DK, Mukhopadhayay SK, Ganguly S, Dhanalakshmi S, Kar I.
PMID: 23543247
J Parasit Dis. 2012 Apr;36(1):99-100. doi: 10.1007/s12639-011-0078-8. Epub 2011 Nov 08.

The present study was undertaken to survey and study the prevalence of different diseases in pigeons in regions in and around Kolkata, India. About 8,000 pigeons from Kolkata region and 2,000 from semi-urban area surrounding Kolkata were selected and...

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Dandapat DK, Mukhopadhayay SK, Ganguly S, et al. Diseases of pigeon in and around Kolkata, India. J Parasit Dis. 2011;36(1):99-100doi: 10.1007/s12639-011-0078-8.
Dandapat, D. K., Mukhopadhayay, S. K., Ganguly, S., Dhanalakshmi, S., & Kar, I. (2012). Diseases of pigeon in and around Kolkata, India. Journal of parasitic diseases : official organ of the Indian Society for Parasitology, 36(1), 99-100. https://doi.org/10.1007/s12639-011-0078-8
Dandapat, D K, et al. "Diseases of pigeon in and around Kolkata, India." Journal of parasitic diseases : official organ of the Indian Society for Parasitology vol. 36,1 (2012): 99-100. doi: https://doi.org/10.1007/s12639-011-0078-8
Dandapat DK, Mukhopadhayay SK, Ganguly S, Dhanalakshmi S, Kar I. Diseases of pigeon in and around Kolkata, India. J Parasit Dis. 2012 Apr;36(1):99-100. doi: 10.1007/s12639-011-0078-8. Epub 2011 Nov 08. PMID: 23543247; PMCID: PMC3284628.
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Relative fat distribution in relation to menarcheal status among Bengalee Hindu girls of West Bengal, India.

Journal of natural science, biology, and medicine

Bhadra M, Mukhopadhyay A, Chakraborty R, Bose K, Koziel S, Ulijaszek S.
PMID: 24082734
J Nat Sci Biol Med. 2013 Jul;4(2):369-73. doi: 10.4103/0976-9668.116997.

BACKGROUND: Menarche seems be related to the relative distribution rather than the total amount of body fat. Previous studies showed that the ratio between lower-body vs. upper-body fat was associated with the timing of menarche.AIM: To compare the relative...

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Bhadra M, Mukhopadhyay A, Chakraborty R, et al. Relative fat distribution in relation to menarcheal status among Bengalee Hindu girls of West Bengal, India. J Nat Sci Biol Med. 2013;4(2):369-73doi: 10.4103/0976-9668.116997.
Bhadra, M., Mukhopadhyay, A., Chakraborty, R., Bose, K., Koziel, S., & Ulijaszek, S. (2013). Relative fat distribution in relation to menarcheal status among Bengalee Hindu girls of West Bengal, India. Journal of natural science, biology, and medicine, 4(2), 369-73. https://doi.org/10.4103/0976-9668.116997
Bhadra, Mithu, et al. "Relative fat distribution in relation to menarcheal status among Bengalee Hindu girls of West Bengal, India." Journal of natural science, biology, and medicine vol. 4,2 (2013): 369-73. doi: https://doi.org/10.4103/0976-9668.116997
Bhadra M, Mukhopadhyay A, Chakraborty R, Bose K, Koziel S, Ulijaszek S. Relative fat distribution in relation to menarcheal status among Bengalee Hindu girls of West Bengal, India. J Nat Sci Biol Med. 2013 Jul;4(2):369-73. doi: 10.4103/0976-9668.116997. PMID: 24082734; PMCID: PMC3783782.
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Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India.

Gut pathogens

Chattopadhyay S, Patra R, Chatterjee R, De R, Alam J, Ramamurthy T, Chowdhury A, Nair GB, Berg DE, Mukhopadhyay AK.
PMID: 22631862
Gut Pathog. 2012 May 25;4(1):4. doi: 10.1186/1757-4749-4-4.

BACKGROUND: Infection with Helicobacter pylori strains that express CagA is associated with gastritis, peptic ulcer disease, and gastric adenocarcinoma. The biological function of CagA depends on tyrosine phosphorylation by a cellular kinase. The phosphate acceptor tyrosine moiety is present...

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Chattopadhyay S, Patra R, Chatterjee R, et al. Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India. Gut Pathog. 2012;4(1):4doi: 10.1186/1757-4749-4-4.
Chattopadhyay, S., Patra, R., Chatterjee, R., De, R., Alam, J., Ramamurthy, T., Chowdhury, A., Nair, G. B., Berg, D. E., & Mukhopadhyay, A. K. (2012). Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India. Gut pathogens, 4(1), 4. https://doi.org/10.1186/1757-4749-4-4
Chattopadhyay, Santanu, et al. "Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India." Gut pathogens vol. 4,1 (2012): 4. doi: https://doi.org/10.1186/1757-4749-4-4
Chattopadhyay S, Patra R, Chatterjee R, De R, Alam J, Ramamurthy T, Chowdhury A, Nair GB, Berg DE, Mukhopadhyay AK. Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India. Gut Pathog. 2012 May 25;4(1):4. doi: 10.1186/1757-4749-4-4. PMID: 22631862; PMCID: PMC3405419.
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Study of serum lipid profile in pregnancy induced hypertension.

Indian journal of clinical biochemistry : IJCB

De J, Mukhopadhyay A, Saha PK.
PMID: 23105637
Indian J Clin Biochem. 2006 Sep;21(2):165-8. doi: 10.1007/BF02912935.

Four groups of subjects: normal healthy normotensive nonpregnant women (Group A), normal normotensive pregnant women (Group B), women with preeclamptic toxaemia (Group C) and eclamptic women (Group D): with fifty subjects in each group, were investigated for serum lipid...

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De J, Mukhopadhyay A, Saha PK. Study of serum lipid profile in pregnancy induced hypertension. Indian J Clin Biochem. 2006;21(2):165-8doi: 10.1007/BF02912935.
De, J., Mukhopadhyay, A., & Saha, P. K. (2006). Study of serum lipid profile in pregnancy induced hypertension. Indian journal of clinical biochemistry : IJCB, 21(2), 165-8. https://doi.org/10.1007/BF02912935
De, Jayanta, et al. "Study of serum lipid profile in pregnancy induced hypertension." Indian journal of clinical biochemistry : IJCB vol. 21,2 (2006): 165-8. doi: https://doi.org/10.1007/BF02912935
De J, Mukhopadhyay A, Saha PK. Study of serum lipid profile in pregnancy induced hypertension. Indian J Clin Biochem. 2006 Sep;21(2):165-8. doi: 10.1007/BF02912935. PMID: 23105637; PMCID: PMC3453987.
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Two-particle distribution and correlation function for a 1D dusty plasma experiment.

Physical review letters

Mukhopadhyay AK, Goree J.
PMID: 23215089
Phys Rev Lett. 2012 Oct 19;109(16):165003. doi: 10.1103/PhysRevLett.109.165003. Epub 2012 Oct 18.

Experimentally measured velocities are used to obtain the one- and two-particle distribution functions f(1) and f(2) and the two-particle correlation function g(2)≡f(2)-f(1)f(1). The fluctuating velocities of interacting charged microparticles were recorded by tracking their motion while they were immersed...

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Mukhopadhyay AK, Goree J. Two-particle distribution and correlation function for a 1D dusty plasma experiment. Phys Rev Lett. 2012;109(16):165003doi: 10.1103/PhysRevLett.109.165003.
Mukhopadhyay, A. K., & Goree, J. (2012). Two-particle distribution and correlation function for a 1D dusty plasma experiment. Physical review letters, 109(16), 165003. https://doi.org/10.1103/PhysRevLett.109.165003
Mukhopadhyay, Amit K, and Goree, J. "Two-particle distribution and correlation function for a 1D dusty plasma experiment." Physical review letters vol. 109,16 (2012): 165003. doi: https://doi.org/10.1103/PhysRevLett.109.165003
Mukhopadhyay AK, Goree J. Two-particle distribution and correlation function for a 1D dusty plasma experiment. Phys Rev Lett. 2012 Oct 19;109(16):165003. doi: 10.1103/PhysRevLett.109.165003. Epub 2012 Oct 18. PMID: 23215089.
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Analyzing large gene expression and methylation data profiles using StatBicRM: statistical biclustering-based rule mining.

PloS one

Maulik U, Mallik S, Mukhopadhyay A, Bandyopadhyay S.
PMID: 25830807
PLoS One. 2015 Apr 01;10(4):e0119448. doi: 10.1371/journal.pone.0119448. eCollection 2015.

Microarray and beadchip are two most efficient techniques for measuring gene expression and methylation data in bioinformatics. Biclustering deals with the simultaneous clustering of genes and samples. In this article, we propose a computational rule mining framework, StatBicRM (i.e.,...

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Maulik U, Mallik S, Mukhopadhyay A, et al. Analyzing large gene expression and methylation data profiles using StatBicRM: statistical biclustering-based rule mining. PLoS One. 2015;10(4):e0119448doi: 10.1371/journal.pone.0119448.
Maulik, U., Mallik, S., Mukhopadhyay, A., & Bandyopadhyay, S. (2015). Analyzing large gene expression and methylation data profiles using StatBicRM: statistical biclustering-based rule mining. PloS one, 10(4), e0119448. https://doi.org/10.1371/journal.pone.0119448
Maulik, Ujjwal, et al. "Analyzing large gene expression and methylation data profiles using StatBicRM: statistical biclustering-based rule mining." PloS one vol. 10,4 (2015): e0119448. doi: https://doi.org/10.1371/journal.pone.0119448
Maulik U, Mallik S, Mukhopadhyay A, Bandyopadhyay S. Analyzing large gene expression and methylation data profiles using StatBicRM: statistical biclustering-based rule mining. PLoS One. 2015 Apr 01;10(4):e0119448. doi: 10.1371/journal.pone.0119448. eCollection 2015. PMID: 25830807; PMCID: PMC4382191.
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Long non-coding RNA: its evolutionary relics and biological implications in mammals: a review.

Journal of animal science and technology

Dhanoa JK, Sethi RS, Verma R, Arora JS, Mukhopadhyay CS.
PMID: 30386629
J Anim Sci Technol. 2018 Oct 25;60:25. doi: 10.1186/s40781-018-0183-7. eCollection 2018.

The central dogma of gene expression propounds that DNA is transcribed to mRNA and finally gets translated into protein. Only 2-3% of the genomic DNA is transcribed to protein-coding mRNA. Interestingly, only a further minuscule part of genomic DNA...

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Dhanoa JK, Sethi RS, Verma R, et al. Long non-coding RNA: its evolutionary relics and biological implications in mammals: a review. J Anim Sci Technol. 2018;60:25doi: 10.1186/s40781-018-0183-7.
Dhanoa, J. K., Sethi, R. S., Verma, R., Arora, J. S., & Mukhopadhyay, C. S. (2018). Long non-coding RNA: its evolutionary relics and biological implications in mammals: a review. Journal of animal science and technology, 6025. https://doi.org/10.1186/s40781-018-0183-7
Dhanoa, Jasdeep Kaur, et al. "Long non-coding RNA: its evolutionary relics and biological implications in mammals: a review." Journal of animal science and technology vol. 60 (2018): 25. doi: https://doi.org/10.1186/s40781-018-0183-7
Dhanoa JK, Sethi RS, Verma R, Arora JS, Mukhopadhyay CS. Long non-coding RNA: its evolutionary relics and biological implications in mammals: a review. J Anim Sci Technol. 2018 Oct 25;60:25. doi: 10.1186/s40781-018-0183-7. eCollection 2018. PMID: 30386629; PMCID: PMC6201556.
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Microphase separation in oriented polymeric chains at the surface of nanomaterials during nanofiber formation.

Soft matter

Janghela S, Devi S, Kambo N, Roy D, Mukhopadhyay K, Prasad NE.
PMID: 31424069
Soft Matter. 2019 Sep 14;15(34):6811-6818. doi: 10.1039/c9sm01250h. Epub 2019 Aug 19.

The presence of low-dimensional functional nanofillers during the formation of morphological phase boundaries in polymeric nanofibers by electrospinning was highlighted in this study. PAN and TPU were both selected with differential viscosities to understand the phase-segregated internal supramolecular structures...

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Janghela S, Devi S, Kambo N, et al. Microphase separation in oriented polymeric chains at the surface of nanomaterials during nanofiber formation. Soft Matter. 2019;15(34):6811-6818doi: 10.1039/c9sm01250h.
Janghela, S., Devi, S., Kambo, N., Roy, D., Mukhopadhyay, K., & Prasad, N. E. (2019). Microphase separation in oriented polymeric chains at the surface of nanomaterials during nanofiber formation. Soft matter, 15(34), 6811-6818. https://doi.org/10.1039/c9sm01250h
Janghela, Shriram, et al. "Microphase separation in oriented polymeric chains at the surface of nanomaterials during nanofiber formation." Soft matter vol. 15,34 (2019): 6811-6818. doi: https://doi.org/10.1039/c9sm01250h
Janghela S, Devi S, Kambo N, Roy D, Mukhopadhyay K, Prasad NE. Microphase separation in oriented polymeric chains at the surface of nanomaterials during nanofiber formation. Soft Matter. 2019 Sep 14;15(34):6811-6818. doi: 10.1039/c9sm01250h. Epub 2019 Aug 19. PMID: 31424069.
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