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Rapid microfluidic solid-phase extraction system for hyper-methylated DNA enrichment and epigenetic analysis.

Biomicrofluidics

De A, Sparreboom W, van den Berg A, Carlen ET.
PMID: 25538809
Biomicrofluidics. 2014 Oct 21;8(5):054119. doi: 10.1063/1.4899059. eCollection 2014 Sep.

Genetic sequence and hyper-methylation profile information from the promoter regions of tumor suppressor genes are important for cancer disease investigation. Since hyper-methylated DNA (hm-DNA) is typically present in ultra-low concentrations in biological samples, such as stool, urine, and saliva,...

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De A, Sparreboom W, van den Berg A, et al. Rapid microfluidic solid-phase extraction system for hyper-methylated DNA enrichment and epigenetic analysis. Biomicrofluidics. 2014;8(5):054119doi: 10.1063/1.4899059.
De, A., Sparreboom, W., van den Berg, A., & Carlen, E. T. (2014). Rapid microfluidic solid-phase extraction system for hyper-methylated DNA enrichment and epigenetic analysis. Biomicrofluidics, 8(5), 054119. https://doi.org/10.1063/1.4899059
De, Arpita, et al. "Rapid microfluidic solid-phase extraction system for hyper-methylated DNA enrichment and epigenetic analysis." Biomicrofluidics vol. 8,5 (2014): 054119. doi: https://doi.org/10.1063/1.4899059
De A, Sparreboom W, van den Berg A, Carlen ET. Rapid microfluidic solid-phase extraction system for hyper-methylated DNA enrichment and epigenetic analysis. Biomicrofluidics. 2014 Oct 21;8(5):054119. doi: 10.1063/1.4899059. eCollection 2014 Sep. PMID: 25538809; PMCID: PMC4241766.
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Genetics of the peroxidase isoenzymes in Petunia : Part 5. Differential temporal expression of prxA alleles.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

van den Berg BM, Bianchi F, Wijsman HJ.
PMID: 24263194
Theor Appl Genet. 1983 Apr;65(1):1-8. doi: 10.1007/BF00276254.

In P. hybrida and the putative progenitor species P. axillaris s. l. and P. integrifolia s. l. five mobility alleles of the structural gene prxA were found. The five alleles show differential expression during development of tissue and plant,...

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van den Berg BM, Bianchi F, Wijsman HJ. Genetics of the peroxidase isoenzymes in Petunia : Part 5. Differential temporal expression of prxA alleles. Theor Appl Genet. 1983;65(1):1-8doi: 10.1007/BF00276254.
van den Berg, B. M., Bianchi, F., & Wijsman, H. J. (1983). Genetics of the peroxidase isoenzymes in Petunia : Part 5. Differential temporal expression of prxA alleles. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 65(1), 1-8. https://doi.org/10.1007/BF00276254
van den Berg, B M, et al. "Genetics of the peroxidase isoenzymes in Petunia : Part 5. Differential temporal expression of prxA alleles." TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik vol. 65,1 (1983): 1-8. doi: https://doi.org/10.1007/BF00276254
van den Berg BM, Bianchi F, Wijsman HJ. Genetics of the peroxidase isoenzymes in Petunia : Part 5. Differential temporal expression of prxA alleles. Theor Appl Genet. 1983 Apr;65(1):1-8. doi: 10.1007/BF00276254. PMID: 24263194.
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Genetics of the peroxidase isoenzymes in Petunia : Part 4. Location and developmental expression of the structural gene prxcC.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

van den Berg BM, Hendriks T, Wijsman HJ.
PMID: 24264828
Theor Appl Genet. 1982 Mar;64(1):75-81. doi: 10.1007/BF00303655.

By starch gel electrophoresis three mobility variants of a cathodic moving doublet of bands, encoded by the structural gene prxC, were detected in all organs of flowering petunias. In root tissue two of the variants showed a lower electrophoretic...

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van den Berg BM, Hendriks T, Wijsman HJ. Genetics of the peroxidase isoenzymes in Petunia : Part 4. Location and developmental expression of the structural gene prxcC. Theor Appl Genet. 1982;64(1):75-81doi: 10.1007/BF00303655.
van den Berg, B. M., Hendriks, T., & Wijsman, H. J. (1982). Genetics of the peroxidase isoenzymes in Petunia : Part 4. Location and developmental expression of the structural gene prxcC. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 64(1), 75-81. https://doi.org/10.1007/BF00303655
van den Berg, B M, et al. "Genetics of the peroxidase isoenzymes in Petunia : Part 4. Location and developmental expression of the structural gene prxcC." TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik vol. 64,1 (1982): 75-81. doi: https://doi.org/10.1007/BF00303655
van den Berg BM, Hendriks T, Wijsman HJ. Genetics of the peroxidase isoenzymes in Petunia : Part 4. Location and developmental expression of the structural gene prxcC. Theor Appl Genet. 1982 Mar;64(1):75-81. doi: 10.1007/BF00303655. PMID: 24264828.
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Genetics of the peroxidase isoenzymes in Petunia : 7. The alleles prxA6 and prxA7.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

van den Berg BM, Bianchi F, Wijsman HJ.
PMID: 24258939
Theor Appl Genet. 1984 May;68(1):25-8. doi: 10.1007/BF00252306.

Two alleles of the structural gene prxA from Petunia, prxA6 and prxA7, could be identified by their differential temporal expression. The alleles prxA6 and prxA7 code for peroxidases with a similar electrophoretic mobility as the products of the previously...

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van den Berg BM, Bianchi F, Wijsman HJ. Genetics of the peroxidase isoenzymes in Petunia : 7. The alleles prxA6 and prxA7. Theor Appl Genet. 1984;68(1):25-8doi: 10.1007/BF00252306.
van den Berg, B. M., Bianchi, F., & Wijsman, H. J. (1984). Genetics of the peroxidase isoenzymes in Petunia : 7. The alleles prxA6 and prxA7. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 68(1), 25-8. https://doi.org/10.1007/BF00252306
van den Berg, B M, et al. "Genetics of the peroxidase isoenzymes in Petunia : 7. The alleles prxA6 and prxA7." TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik vol. 68,1 (1984): 25-8. doi: https://doi.org/10.1007/BF00252306
van den Berg BM, Bianchi F, Wijsman HJ. Genetics of the peroxidase isoenzymes in Petunia : 7. The alleles prxA6 and prxA7. Theor Appl Genet. 1984 May;68(1):25-8. doi: 10.1007/BF00252306. PMID: 24258939.
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Search for isovector giant monopole resonances via the Pb(3He,tp) reaction.

Physical review letters

Zegers RG, van Den Berg AM, Brandenburg S, Fleurot FR, Fujiwara M, Guillot J, Hannen VM, Harakeh MN, Laurent H, van Der Schaaf K, van Der Werf SY, Willis A, Wilschut HW.
PMID: 11019204
Phys Rev Lett. 2000 Apr 24;84(17):3779-82. doi: 10.1103/PhysRevLett.84.3779.

The (nat)Pb(3He,tp) reaction at E(3He) = 177 MeV was studied to identify 2Planck's over 2piomega isovector monopole strength in Bi isotopes. Monopole strength was found in the region -45

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Zegers RG, van Den Berg AM, Brandenburg S, et al. Search for isovector giant monopole resonances via the Pb(3He,tp) reaction. Phys Rev Lett. 2000;84(17):3779-82doi: 10.1103/PhysRevLett.84.3779.
Zegers, R. G., van Den Berg AM, Brandenburg, S., Fleurot, F. R., Fujiwara, M., Guillot, J., Hannen, V. M., Harakeh, M. N., Laurent, H., van Der Schaaf K, van Der Werf SY, Willis, A., & Wilschut, H. W. (2000). Search for isovector giant monopole resonances via the Pb(3He,tp) reaction. Physical review letters, 84(17), 3779-82. https://doi.org/10.1103/PhysRevLett.84.3779
Zegers, et al. "Search for isovector giant monopole resonances via the Pb(3He,tp) reaction." Physical review letters vol. 84,17 (2000): 3779-82. doi: https://doi.org/10.1103/PhysRevLett.84.3779
Zegers RG, van Den Berg AM, Brandenburg S, Fleurot FR, Fujiwara M, Guillot J, Hannen VM, Harakeh MN, Laurent H, van Der Schaaf K, van Der Werf SY, Willis A, Wilschut HW. Search for isovector giant monopole resonances via the Pb(3He,tp) reaction. Phys Rev Lett. 2000 Apr 24;84(17):3779-82. doi: 10.1103/PhysRevLett.84.3779. PMID: 11019204.
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Excitation and decay of the isovector giant monopole resonances via the 208Pb(3He,t p) reaction at 410 MeV.

Physical review letters

Zegers RG, Abend H, Akimune H, van den Berg AM, Fujimura H, Fujita H, Fujita Y, Fujiwara M, Galès S, Hara K, Harakeh MN, Ishikawa T, Kawabata T, Kawase K, Mibe T, Nakanishi K, Nakayama S, Toyokawa H, Uchida M, Yamagata T, Yamasaki K, Yosoi M.
PMID: 12785887
Phys Rev Lett. 2003 May 23;90(20):202501. doi: 10.1103/PhysRevLett.90.202501. Epub 2003 May 20.

The excitation and subsequent proton decay of the isovector spin-flip giant monopole resonance (IVSGMR) is studied via the 208Pb(3He,t) reaction at 410 MeV. In the inclusive spectrum (60+/-5)% of the non-energy-weighted sum-rule strength for this 2 variant Planck's over...

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Zegers RG, Abend H, Akimune H, et al. Excitation and decay of the isovector giant monopole resonances via the 208Pb(3He,t p) reaction at 410 MeV. Phys Rev Lett. 2003;90(20):202501doi: 10.1103/PhysRevLett.90.202501.
Zegers, R. G., Abend, H., Akimune, H., van den Berg, A. M., Fujimura, H., Fujita, H., Fujita, Y., Fujiwara, M., Galès, S., Hara, K., Harakeh, M. N., Ishikawa, T., Kawabata, T., Kawase, K., Mibe, T., Nakanishi, K., Nakayama, S., Toyokawa, H., Uchida, M., Yamagata, T., Yamasaki, K., & Yosoi, M. (2003). Excitation and decay of the isovector giant monopole resonances via the 208Pb(3He,t p) reaction at 410 MeV. Physical review letters, 90(20), 202501. https://doi.org/10.1103/PhysRevLett.90.202501
Zegers, R G T, et al. "Excitation and decay of the isovector giant monopole resonances via the 208Pb(3He,t p) reaction at 410 MeV." Physical review letters vol. 90,20 (2003): 202501. doi: https://doi.org/10.1103/PhysRevLett.90.202501
Zegers RG, Abend H, Akimune H, van den Berg AM, Fujimura H, Fujita H, Fujita Y, Fujiwara M, Galès S, Hara K, Harakeh MN, Ishikawa T, Kawabata T, Kawase K, Mibe T, Nakanishi K, Nakayama S, Toyokawa H, Uchida M, Yamagata T, Yamasaki K, Yosoi M. Excitation and decay of the isovector giant monopole resonances via the 208Pb(3He,t p) reaction at 410 MeV. Phys Rev Lett. 2003 May 23;90(20):202501. doi: 10.1103/PhysRevLett.90.202501. Epub 2003 May 20. PMID: 12785887.
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Roots Redefined: Anatomical and Genetic Analysis of Root Development.

Plant physiology

Scheres B, McKhann HI, Van Den Berg C.
PMID: 12226340
Plant Physiol. 1996 Aug;111(4):959-964. doi: 10.1104/pp.111.4.959.

No abstract available.

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Scheres B, McKhann HI, Van Den Berg C. Roots Redefined: Anatomical and Genetic Analysis of Root Development. Plant Physiol. 1996;111(4):959-964doi: 10.1104/pp.111.4.959.
Scheres, B., McKhann, H. I., & Van Den Berg, C. (1996). Roots Redefined: Anatomical and Genetic Analysis of Root Development. Plant physiology, 111(4), 959-964. https://doi.org/10.1104/pp.111.4.959
Scheres, B., et al. "Roots Redefined: Anatomical and Genetic Analysis of Root Development." Plant physiology vol. 111,4 (1996): 959-964. doi: https://doi.org/10.1104/pp.111.4.959
Scheres B, McKhann HI, Van Den Berg C. Roots Redefined: Anatomical and Genetic Analysis of Root Development. Plant Physiol. 1996 Aug;111(4):959-964. doi: 10.1104/pp.111.4.959. PMID: 12226340; PMCID: PMC160962.
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Gamow-teller strengths of the inverse beta transition 176Yb-->176Lu for spectroscopy of proton-proton and other sub-MeV solar neutrinos.

Physical review letters

Fujiwara M, Akimune H, van Den Berg AM, Cribier M, Daito I, Ejiri H, Fujimura H, Fujita Y, Goodman CD, Hara K, Harakeh MN, Ihara F, Ishikawa T, Janecke J, Kawabata T, Raghavan RS, Schwarz K, Tanaka M, Yamanaka T, Yosoi M, Zegers RG.
PMID: 11082566
Phys Rev Lett. 2000 Nov 20;85(21):4442-5. doi: 10.1103/PhysRevLett.85.4442.

Discrete Gamow-Teller (GT) transitions 176Yb-->176Lu at low excitation energies have been measured via the ( 3He,t) reaction at 450 MeV and at 0 degrees. For 176Yb, two low-lying states are observed, setting low thresholds Q(nu) = 301 and 445...

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Fujiwara M, Akimune H, van Den Berg AM, et al. Gamow-teller strengths of the inverse beta transition 176Yb-->176Lu for spectroscopy of proton-proton and other sub-MeV solar neutrinos. Phys Rev Lett. 2000;85(21):4442-5doi: 10.1103/PhysRevLett.85.4442.
Fujiwara, M., Akimune, H., van Den Berg AM, Cribier, M., Daito, I., Ejiri, H., Fujimura, H., Fujita, Y., Goodman, C. D., Hara, K., Harakeh, M. N., Ihara, F., Ishikawa, T., Janecke, J., Kawabata, T., Raghavan, R. S., Schwarz, K., Tanaka, M., Yamanaka, T., Yosoi, M., & Zegers, R. G. (2000). Gamow-teller strengths of the inverse beta transition 176Yb-->176Lu for spectroscopy of proton-proton and other sub-MeV solar neutrinos. Physical review letters, 85(21), 4442-5. https://doi.org/10.1103/PhysRevLett.85.4442
Fujiwara, et al. "Gamow-teller strengths of the inverse beta transition 176Yb-->176Lu for spectroscopy of proton-proton and other sub-MeV solar neutrinos." Physical review letters vol. 85,21 (2000): 4442-5. doi: https://doi.org/10.1103/PhysRevLett.85.4442
Fujiwara M, Akimune H, van Den Berg AM, Cribier M, Daito I, Ejiri H, Fujimura H, Fujita Y, Goodman CD, Hara K, Harakeh MN, Ihara F, Ishikawa T, Janecke J, Kawabata T, Raghavan RS, Schwarz K, Tanaka M, Yamanaka T, Yosoi M, Zegers RG. Gamow-teller strengths of the inverse beta transition 176Yb-->176Lu for spectroscopy of proton-proton and other sub-MeV solar neutrinos. Phys Rev Lett. 2000 Nov 20;85(21):4442-5. doi: 10.1103/PhysRevLett.85.4442. PMID: 11082566.
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Optimization of an electrolyte conductivity detector for measuring low ion concentrations.

Lab on a chip

Timmer B, Sparreboom W, Olthuis W, Bergveld P, van den Berg A.
PMID: 15100845
Lab Chip. 2002 May;2(2):121-4. doi: 10.1039/b201225a. Epub 2002 Apr 17.

The optimization process of a planar interdigitated conductivity detector for measuring very low electrolyte concentrations for use in a lab-on-chip gas detection system is described. An electrical equivalent of the sensor is given, which includes the double layer capacitance...

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Timmer B, Sparreboom W, Olthuis W, et al. Optimization of an electrolyte conductivity detector for measuring low ion concentrations. Lab Chip. 2002;2(2):121-4doi: 10.1039/b201225a.
Timmer, B., Sparreboom, W., Olthuis, W., Bergveld, P., & van den Berg, A. (2002). Optimization of an electrolyte conductivity detector for measuring low ion concentrations. Lab on a chip, 2(2), 121-4. https://doi.org/10.1039/b201225a
Timmer, Björan, et al. "Optimization of an electrolyte conductivity detector for measuring low ion concentrations." Lab on a chip vol. 2,2 (2002): 121-4. doi: https://doi.org/10.1039/b201225a
Timmer B, Sparreboom W, Olthuis W, Bergveld P, van den Berg A. Optimization of an electrolyte conductivity detector for measuring low ion concentrations. Lab Chip. 2002 May;2(2):121-4. doi: 10.1039/b201225a. Epub 2002 Apr 17. PMID: 15100845.
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Effects of traditional processing methods of linseed oil on the composition of its triacylglycerols.

Journal of separation science

van den Berg JD, Vermist ND, Carlyle L, Holcapek M, Boon JJ.
PMID: 15334906
J Sep Sci. 2004 Feb;27(3):181-99. doi: 10.1002/jssc.200301610.

Different oil processing methods were performed, which included washing with water and treatment with lead-based driers, with and without heating to different temperatures, giving a set of 7 oils to be investigated. The effects of the traditional processing methods...

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van den Berg JD, Vermist ND, Carlyle L, et al. Effects of traditional processing methods of linseed oil on the composition of its triacylglycerols. J Sep Sci. 2004;27(3):181-99doi: 10.1002/jssc.200301610.
van den Berg, J. D., Vermist, N. D., Carlyle, L., Holcapek, M., & Boon, J. J. (2004). Effects of traditional processing methods of linseed oil on the composition of its triacylglycerols. Journal of separation science, 27(3), 181-99. https://doi.org/10.1002/jssc.200301610
van den Berg, Jorrit D J, et al. "Effects of traditional processing methods of linseed oil on the composition of its triacylglycerols." Journal of separation science vol. 27,3 (2004): 181-99. doi: https://doi.org/10.1002/jssc.200301610
van den Berg JD, Vermist ND, Carlyle L, Holcapek M, Boon JJ. Effects of traditional processing methods of linseed oil on the composition of its triacylglycerols. J Sep Sci. 2004 Feb;27(3):181-99. doi: 10.1002/jssc.200301610. PMID: 15334906.
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Microstructural and chemical transformation of thin Ti/Pd and TiDy/Pd bilayer films induced by vacuum annealing.

Analytical and bioanalytical chemistry

Lisowski W, Keim EG, Kaszkur Z, van den Berg AH, Smithers MA.
PMID: 17891384
Anal Bioanal Chem. 2007 Nov;389(5):1489-98. doi: 10.1007/s00216-007-1594-3. Epub 2007 Sep 22.

Using a combination of scanning electron microscopy, transmission electron microscopy (TEM), X-ray diffraction and X-ray photoelectron spectroscopy (XPS), we made a comparative study of the high-temperature annealing impact on thin titanium deuteride (TiD(y)) films covered by an ultrathin Pd...

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Lisowski W, Keim EG, Kaszkur Z, et al. Microstructural and chemical transformation of thin Ti/Pd and TiDy/Pd bilayer films induced by vacuum annealing. Anal Bioanal Chem. 2007;389(5):1489-98doi: 10.1007/s00216-007-1594-3.
Lisowski, W., Keim, E. G., Kaszkur, Z., van den Berg, A. H., & Smithers, M. A. (2007). Microstructural and chemical transformation of thin Ti/Pd and TiDy/Pd bilayer films induced by vacuum annealing. Analytical and bioanalytical chemistry, 389(5), 1489-98. https://doi.org/10.1007/s00216-007-1594-3
Lisowski, W, et al. "Microstructural and chemical transformation of thin Ti/Pd and TiDy/Pd bilayer films induced by vacuum annealing." Analytical and bioanalytical chemistry vol. 389,5 (2007): 1489-98. doi: https://doi.org/10.1007/s00216-007-1594-3
Lisowski W, Keim EG, Kaszkur Z, van den Berg AH, Smithers MA. Microstructural and chemical transformation of thin Ti/Pd and TiDy/Pd bilayer films induced by vacuum annealing. Anal Bioanal Chem. 2007 Nov;389(5):1489-98. doi: 10.1007/s00216-007-1594-3. Epub 2007 Sep 22. PMID: 17891384.
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Optical fiber-based on-line UV/Vis spectroscopic monitoring of chemical reaction kinetics under high pressure in a capillary microreactor.

Chemical communications (Cambridge, England)

Benito-Lopez F, Verboom W, Kakuta M, Gardeniers JH, Egberink RJ, Oosterbroek ER, van den Berg A, Reinhoudt DN.
PMID: 15928782
Chem Commun (Camb). 2005 Jun 14;(22):2857-9. doi: 10.1039/b500429b. Epub 2005 Apr 22.

With a miniaturized (3 microL volume) fiber-optics based system for on-line measurement by UV/Vis spectroscopy, the reaction rate constants (at different pressures) and the activation volumes (deltaV(not =)) were determined for a nucleophilic aromatic substitution and an aza Diels-Alder...

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Benito-Lopez F, Verboom W, Kakuta M, et al. Optical fiber-based on-line UV/Vis spectroscopic monitoring of chemical reaction kinetics under high pressure in a capillary microreactor. Chem Commun (Camb). 2005;(22):2857-9doi: 10.1039/b500429b.
Benito-Lopez, F., Verboom, W., Kakuta, M., Gardeniers, J. H., Egberink, R. J., Oosterbroek, E. R., van den Berg, A., & Reinhoudt, D. N. (2005). Optical fiber-based on-line UV/Vis spectroscopic monitoring of chemical reaction kinetics under high pressure in a capillary microreactor. Chemical communications (Cambridge, England), (22), 2857-9. https://doi.org/10.1039/b500429b
Benito-Lopez, Fernando, et al. "Optical fiber-based on-line UV/Vis spectroscopic monitoring of chemical reaction kinetics under high pressure in a capillary microreactor." Chemical communications (Cambridge, England) vol. ,22 (2005): 2857-9. doi: https://doi.org/10.1039/b500429b
Benito-Lopez F, Verboom W, Kakuta M, Gardeniers JH, Egberink RJ, Oosterbroek ER, van den Berg A, Reinhoudt DN. Optical fiber-based on-line UV/Vis spectroscopic monitoring of chemical reaction kinetics under high pressure in a capillary microreactor. Chem Commun (Camb). 2005 Jun 14;(22):2857-9. doi: 10.1039/b500429b. Epub 2005 Apr 22. PMID: 15928782.
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