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Studies on a possible regulatory mechanism for the biosynthesis of deoxyribonucleic acid.

The Journal of biological chemistry

REICHARD P, CANELLAKIS ZN, CANELLAKIS ES.
PMID: 13740427
J Biol Chem. 1961 Sep;236:2514-9.

No abstract available.

Cite
REICHARD P, CANELLAKIS ZN, CANELLAKIS ES. Studies on a possible regulatory mechanism for the biosynthesis of deoxyribonucleic acid. J Biol Chem. 1961;236:2514-9
REICHARD, P., CANELLAKIS, Z. N., & CANELLAKIS, E. S. (1961). Studies on a possible regulatory mechanism for the biosynthesis of deoxyribonucleic acid. The Journal of biological chemistry, 2362514-9.
REICHARD, P, et al. "Studies on a possible regulatory mechanism for the biosynthesis of deoxyribonucleic acid." The Journal of biological chemistry vol. 236 (1961): 2514-9.
REICHARD P, CANELLAKIS ZN, CANELLAKIS ES. Studies on a possible regulatory mechanism for the biosynthesis of deoxyribonucleic acid. J Biol Chem. 1961 Sep;236:2514-9. PMID: 13740427.
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Reading nanopore clocks in single-molecule electrophoresis experiments.

Biophysical journal

Muthukumar M, Katkar HH.
PMID: 25564846
Biophys J. 2015 Jan 06;108(1):17-9. doi: 10.1016/j.bpj.2014.11.3452.

No abstract available.

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Muthukumar M, Katkar HH. Reading nanopore clocks in single-molecule electrophoresis experiments. Biophys J. 2015;108(1):17-9doi: 10.1016/j.bpj.2014.11.3452.
Muthukumar, M., & Katkar, H. H. (2015). Reading nanopore clocks in single-molecule electrophoresis experiments. Biophysical journal, 108(1), 17-9. https://doi.org/10.1016/j.bpj.2014.11.3452
Muthukumar, M, and Katkar, H H. "Reading nanopore clocks in single-molecule electrophoresis experiments." Biophysical journal vol. 108,1 (2015): 17-9. doi: https://doi.org/10.1016/j.bpj.2014.11.3452
Muthukumar M, Katkar HH. Reading nanopore clocks in single-molecule electrophoresis experiments. Biophys J. 2015 Jan 06;108(1):17-9. doi: 10.1016/j.bpj.2014.11.3452. PMID: 25564846; PMCID: PMC4286606.
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Computational analysis of protein-DNA interactions from ChIP-seq data.

Methods in molecular biology (Clifton, N.J.)

Rougemont J, Naef F.
PMID: 21938632
Methods Mol Biol. 2012;786:263-73. doi: 10.1007/978-1-61779-292-2_16.

Chromatin immunoprecipitation experiments followed by ultra-high-throughput sequencing (ChIP-seq) is becoming the method of choice to identify transcription factor binding sites in prokaryotes and eukaryotes in vivo. Here, we review the computational steps that are necessary for analyzing the sequenced...

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Rougemont J, Naef F. Computational analysis of protein-DNA interactions from ChIP-seq data. Methods Mol Biol. 2012;786:263-73doi: 10.1007/978-1-61779-292-2_16.
Rougemont, J., & Naef, F. (2012). Computational analysis of protein-DNA interactions from ChIP-seq data. Methods in molecular biology (Clifton, N.J.), 786263-73. https://doi.org/10.1007/978-1-61779-292-2_16
Rougemont, Jacques, and Naef, Felix. "Computational analysis of protein-DNA interactions from ChIP-seq data." Methods in molecular biology (Clifton, N.J.) vol. 786 (2012): 263-73. doi: https://doi.org/10.1007/978-1-61779-292-2_16
Rougemont J, Naef F. Computational analysis of protein-DNA interactions from ChIP-seq data. Methods Mol Biol. 2012;786:263-73. doi: 10.1007/978-1-61779-292-2_16. PMID: 21938632.
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Cell-free circulating DNA as a novel biomarker in patients with the acute coronary syndrome.

Cardiology

Balta S, Demirkol S, Cakar M, Karaman M, Ay SA, Arslan Z.
PMID: 23969681
Cardiology. 2013;126(2):122-3. doi: 10.1159/000353266. Epub 2013 Aug 17.

No abstract available.

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Balta S, Demirkol S, Cakar M, et al. Cell-free circulating DNA as a novel biomarker in patients with the acute coronary syndrome. Cardiology. 2013;126(2):122-3doi: 10.1159/000353266.
Balta, S., Demirkol, S., Cakar, M., Karaman, M., Ay, S. A., & Arslan, Z. (2013). Cell-free circulating DNA as a novel biomarker in patients with the acute coronary syndrome. Cardiology, 126(2), 122-3. https://doi.org/10.1159/000353266
Balta, Sevket, et al. "Cell-free circulating DNA as a novel biomarker in patients with the acute coronary syndrome." Cardiology vol. 126,2 (2013): 122-3. doi: https://doi.org/10.1159/000353266
Balta S, Demirkol S, Cakar M, Karaman M, Ay SA, Arslan Z. Cell-free circulating DNA as a novel biomarker in patients with the acute coronary syndrome. Cardiology. 2013;126(2):122-3. doi: 10.1159/000353266. Epub 2013 Aug 17. PMID: 23969681.
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Transport of DNA in hydrophobic microchannels: a dissipative particle dynamics simulation.

Soft matter

Ranjith SK, Patnaik BS, Vedantam S.
PMID: 24770612
Soft Matter. 2014 Jun 21;10(23):4184-91. doi: 10.1039/c3sm53035c.

In this work, we numerically study a new means of manipulating single DNA chains in microchannels. The method is based on the effect of finite slip at hydrophobic walls on the hydrodynamics and, consequently, on the dynamics of the...

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Ranjith SK, Patnaik BS, Vedantam S. Transport of DNA in hydrophobic microchannels: a dissipative particle dynamics simulation. Soft Matter. 2014;10(23):4184-91doi: 10.1039/c3sm53035c.
Ranjith, S. K., Patnaik, B. S., & Vedantam, S. (2014). Transport of DNA in hydrophobic microchannels: a dissipative particle dynamics simulation. Soft matter, 10(23), 4184-91. https://doi.org/10.1039/c3sm53035c
Ranjith, S Kumar, et al. "Transport of DNA in hydrophobic microchannels: a dissipative particle dynamics simulation." Soft matter vol. 10,23 (2014): 4184-91. doi: https://doi.org/10.1039/c3sm53035c
Ranjith SK, Patnaik BS, Vedantam S. Transport of DNA in hydrophobic microchannels: a dissipative particle dynamics simulation. Soft Matter. 2014 Jun 21;10(23):4184-91. doi: 10.1039/c3sm53035c. PMID: 24770612.
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Models for DNA Design Tools: The Trouble with Metaphors Is That They Don't Go Away.

ACS synthetic biology

Szymanski E, Scher E.
PMID: 31580653
ACS Synth Biol. 2019 Dec 20;8(12):2635-2641. doi: 10.1021/acssynbio.9b00302. Epub 2019 Dec 03.

Synthetic biology relies heavily on DNA design tools to enable manipulation of DNA

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Szymanski E, Scher E. Models for DNA Design Tools: The Trouble with Metaphors Is That They Don't Go Away. ACS Synth Biol. 2019;8(12):2635-2641doi: 10.1021/acssynbio.9b00302.
Szymanski, E., & Scher, E. (2019). Models for DNA Design Tools: The Trouble with Metaphors Is That They Don't Go Away. ACS synthetic biology, 8(12), 2635-2641. https://doi.org/10.1021/acssynbio.9b00302
Szymanski, Erika, and Scher, Emily. "Models for DNA Design Tools: The Trouble with Metaphors Is That They Don't Go Away." ACS synthetic biology vol. 8,12 (2019): 2635-2641. doi: https://doi.org/10.1021/acssynbio.9b00302
Szymanski E, Scher E. Models for DNA Design Tools: The Trouble with Metaphors Is That They Don't Go Away. ACS Synth Biol. 2019 Dec 20;8(12):2635-2641. doi: 10.1021/acssynbio.9b00302. Epub 2019 Dec 03. PMID: 31580653.
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A modular approach for dCas9-mediated enzyme cascading .

Chemical communications (Cambridge, England)

Berckman EA, Chen W.
PMID: 32840530
Chem Commun (Camb). 2020 Sep 29;56(77):11426-11428. doi: 10.1039/d0cc04196c.

We report a new modular strategy to assemble dCas9-guided enzyme cascades by employing orthogonal post-translation chemistry. Two orthogonal SpyCatcher and SnoopCatcher pairs were used for the one-pot enzyme bioconjugation onto two different dCas9 proteins to enable their guided assembly...

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Berckman EA, Chen W. A modular approach for dCas9-mediated enzyme cascading . Chem Commun (Camb). 2020;56(77):11426-11428doi: 10.1039/d0cc04196c.
Berckman, E. A., & Chen, W. (2020). A modular approach for dCas9-mediated enzyme cascading . Chemical communications (Cambridge, England), 56(77), 11426-11428. https://doi.org/10.1039/d0cc04196c
Berckman, Emily A, and Chen, Wilfred. "A modular approach for dCas9-mediated enzyme cascading ." Chemical communications (Cambridge, England) vol. 56,77 (2020): 11426-11428. doi: https://doi.org/10.1039/d0cc04196c
Berckman EA, Chen W. A modular approach for dCas9-mediated enzyme cascading . Chem Commun (Camb). 2020 Sep 29;56(77):11426-11428. doi: 10.1039/d0cc04196c. PMID: 32840530.
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Editorial: Single-molecule studies of DNA-protein interactions collection 2021.

Nucleic acids research

Bianco PR, Sale JE, Reyes-Lamothe R.
PMID: 34153108
Nucleic Acids Res. 2021 Jun 21;49(11):6005-6006. doi: 10.1093/nar/gkab497.

No abstract available.

Cite
Bianco PR, Sale JE, Reyes-Lamothe R. Editorial: Single-molecule studies of DNA-protein interactions collection 2021. Nucleic Acids Res. 2021;49(11):6005-6006doi: 10.1093/nar/gkab497.
Bianco, P. R., Sale, J. E., & Reyes-Lamothe, R. (2021). Editorial: Single-molecule studies of DNA-protein interactions collection 2021. Nucleic acids research, 49(11), 6005-6006. https://doi.org/10.1093/nar/gkab497
Bianco, Piero R, et al. "Editorial: Single-molecule studies of DNA-protein interactions collection 2021." Nucleic acids research vol. 49,11 (2021): 6005-6006. doi: https://doi.org/10.1093/nar/gkab497
Bianco PR, Sale JE, Reyes-Lamothe R. Editorial: Single-molecule studies of DNA-protein interactions collection 2021. Nucleic Acids Res. 2021 Jun 21;49(11):6005-6006. doi: 10.1093/nar/gkab497. PMID: 34153108; PMCID: PMC8216273.
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Showing 25 to 32 of 32 entries