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Towards a Digital Twin of the Earth System: Geo-Soft-CoRe, a Geoscientific Software & Code Repository

Cultural Transformation in the Geoscience Community AND Program Evaluation

Alcalde J, Baykiev E, DeFelipe I.
GSID: s68zly_Ad3oJ
I DeFelipe, J Alcalde, E Baykiev, I Bernal… - … in Earth Science, 2022 - frontiersin.org

The immense advances in computer power achieved in the last decades have had a significant impact in Earth science, providing valuable research outputs that allow the simulation of complex natural processes and systems, and generating improved forecasts. The development...

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DeFelipe, I., Alcalde, J., Baykiev, E., Bernal, I., Boonma, K., Carbonell, R., ... & Ventosa, S. (2022). Towards a Digital Twin of the Earth System: Geo-Soft-CoRe, a Geoscientific Software & Code Repository. Frontiers in Earth Science, 509.
DeFelipe, Irene, et al. "Towards a Digital Twin of the Earth System: Geo-Soft-CoRe, a Geoscientific Software & Code Repository." Frontiers in Earth Science (2022): 509.
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Correction: An increase in visceral fat is associated with a decrease in the taste and olfactory capacity.

PloS one

Fernandez-Garcia JC, Alcaide J, Santiago-Fernandez C, Roca-Rodriguez MM, Aguera Z, Baños R, Botella C, de la Torre R, Fernandez-Real JM, Fruhbeck G, Gomez-Ambrosi J, Jimenez-Murcia S, Menchon JM, Casanueva FF, Fernandez-Aranda F, Tinahones FJ, Garrido-Sanchez L.
PMID: 28257495
PLoS One. 2017 Mar 03;12(3):e0173588. doi: 10.1371/journal.pone.0173588. eCollection 2017.

[This corrects the article DOI: 10.1371/journal.pone.0171204.].

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Fernandez-Garcia JC, Alcaide J, Santiago-Fernandez C, et al. Correction: An increase in visceral fat is associated with a decrease in the taste and olfactory capacity. PLoS One. 2017;12(3):e0173588doi: 10.1371/journal.pone.0173588.
Fernandez-Garcia, J. C., Alcaide, J., Santiago-Fernandez, C., Roca-Rodriguez, M. M., Aguera, Z., Baños, R., Botella, C., de la Torre, R., Fernandez-Real, J. M., Fruhbeck, G., Gomez-Ambrosi, J., Jimenez-Murcia, S., Menchon, J. M., Casanueva, F. F., Fernandez-Aranda, F., Tinahones, F. J., & Garrido-Sanchez, L. (2017). Correction: An increase in visceral fat is associated with a decrease in the taste and olfactory capacity. PloS one, 12(3), e0173588. https://doi.org/10.1371/journal.pone.0173588
Fernandez-Garcia, Jose Carlos, et al. "Correction: An increase in visceral fat is associated with a decrease in the taste and olfactory capacity." PloS one vol. 12,3 (2017): e0173588. doi: https://doi.org/10.1371/journal.pone.0173588
Fernandez-Garcia JC, Alcaide J, Santiago-Fernandez C, Roca-Rodriguez MM, Aguera Z, Baños R, Botella C, de la Torre R, Fernandez-Real JM, Fruhbeck G, Gomez-Ambrosi J, Jimenez-Murcia S, Menchon JM, Casanueva FF, Fernandez-Aranda F, Tinahones FJ, Garrido-Sanchez L. Correction: An increase in visceral fat is associated with a decrease in the taste and olfactory capacity. PLoS One. 2017 Mar 03;12(3):e0173588. doi: 10.1371/journal.pone.0173588. eCollection 2017. PMID: 28257495; PMCID: PMC5336289.
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Extending our tools and resources in the non-conventional industrial yeast .

Metabolomics : Official journal of the Metabolomic Society

Alcalde E, Fraser PD.
PMID: 29479298
Metabolomics. 2018;14(3):30. doi: 10.1007/s11306-017-1313-9. Epub 2018 Feb 12.

OBJECTIVE: In order to fully exploit the industrial potential of METHOD: Four quenching methods and five extraction methods compatible with GC-MS and UPLC profiling were tested and validated by analysing steady state metabolite changes of RESULTS: A customised Automated...

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Alcalde E, Fraser PD. Extending our tools and resources in the non-conventional industrial yeast . Metabolomics. 2018;14(3):30doi: 10.1007/s11306-017-1313-9.
Alcalde, E., & Fraser, P. D. (2018). Extending our tools and resources in the non-conventional industrial yeast . Metabolomics : Official journal of the Metabolomic Society, 14(3), 30. https://doi.org/10.1007/s11306-017-1313-9
Alcalde, Eugenio, and Fraser, Paul D. "Extending our tools and resources in the non-conventional industrial yeast ." Metabolomics : Official journal of the Metabolomic Society vol. 14,3 (2018): 30. doi: https://doi.org/10.1007/s11306-017-1313-9
Alcalde E, Fraser PD. Extending our tools and resources in the non-conventional industrial yeast . Metabolomics. 2018;14(3):30. doi: 10.1007/s11306-017-1313-9. Epub 2018 Feb 12. PMID: 29479298; PMCID: PMC5809543.
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Pathologic anatomy of complete transposition of the arterial trunks.

Pediatrics

LEV M, ALCALDE VM, BAFFES TG.
PMID: 13761304
Pediatrics. 1961 Aug;28:293-306.

No abstract available.

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LEV M, ALCALDE VM, BAFFES TG. Pathologic anatomy of complete transposition of the arterial trunks. Pediatrics. 1961;28:293-306
LEV, M., ALCALDE, V. M., & BAFFES, T. G. (1961). Pathologic anatomy of complete transposition of the arterial trunks. Pediatrics, 28293-306.
LEV, M, et al. "Pathologic anatomy of complete transposition of the arterial trunks." Pediatrics vol. 28 (1961): 293-306.
LEV M, ALCALDE VM, BAFFES TG. Pathologic anatomy of complete transposition of the arterial trunks. Pediatrics. 1961 Aug;28:293-306. PMID: 13761304.
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On the properties of methylbenzoate/n-hexane mixed solvents: a theoretical and experimental study.

The journal of physical chemistry. B

Aparicio S, Alcalde R, Davila MJ, García B, Leal JM.
PMID: 18373359
J Phys Chem B. 2008 Apr 24;112(16):5047-57. doi: 10.1021/jp073247s. Epub 2008 Mar 29.

This paper reports on an experimental and theoretical study of methylbenzoate/n-hexane mixed solvents as a function of pressure and temperature in the whole composition range. We have measured the pressure-volume-temperature (PVT) behavior of these fluids over wide temperature and...

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Aparicio S, Alcalde R, Davila MJ, et al. On the properties of methylbenzoate/n-hexane mixed solvents: a theoretical and experimental study. J Phys Chem B. 2008;112(16):5047-57doi: 10.1021/jp073247s.
Aparicio, S., Alcalde, R., Davila, M. J., García, B., & Leal, J. M. (2008). On the properties of methylbenzoate/n-hexane mixed solvents: a theoretical and experimental study. The journal of physical chemistry. B, 112(16), 5047-57. https://doi.org/10.1021/jp073247s
Aparicio, Santiago, et al. "On the properties of methylbenzoate/n-hexane mixed solvents: a theoretical and experimental study." The journal of physical chemistry. B vol. 112,16 (2008): 5047-57. doi: https://doi.org/10.1021/jp073247s
Aparicio S, Alcalde R, Davila MJ, García B, Leal JM. On the properties of methylbenzoate/n-hexane mixed solvents: a theoretical and experimental study. J Phys Chem B. 2008 Apr 24;112(16):5047-57. doi: 10.1021/jp073247s. Epub 2008 Mar 29. PMID: 18373359.
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PVTx measurements of the N-methylpyrrolidone/methanol mixed solvent: cubic and SAFT EOS analyses.

The journal of physical chemistry. B

Aparicio S, García B, Alcalde R, Davila MJ, Leal JM.
PMID: 16571005
J Phys Chem B. 2006 Apr 06;110(13):6933-42. doi: 10.1021/jp060143t.

The PVTx behavior for the x N-methylpyrrolidone (NMP) + (1 - x) methanol compressed liquid solvent is reported over the full composition range and within wide pressure and temperature ranges. The derived excess properties were analyzed in terms of...

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Aparicio S, García B, Alcalde R, et al. PVTx measurements of the N-methylpyrrolidone/methanol mixed solvent: cubic and SAFT EOS analyses. J Phys Chem B. 2006;110(13):6933-42doi: 10.1021/jp060143t.
Aparicio, S., García, B., Alcalde, R., Davila, M. J., & Leal, J. M. (2006). PVTx measurements of the N-methylpyrrolidone/methanol mixed solvent: cubic and SAFT EOS analyses. The journal of physical chemistry. B, 110(13), 6933-42. https://doi.org/10.1021/jp060143t
Aparicio, Santiago, et al. "PVTx measurements of the N-methylpyrrolidone/methanol mixed solvent: cubic and SAFT EOS analyses." The journal of physical chemistry. B vol. 110,13 (2006): 6933-42. doi: https://doi.org/10.1021/jp060143t
Aparicio S, García B, Alcalde R, Davila MJ, Leal JM. PVTx measurements of the N-methylpyrrolidone/methanol mixed solvent: cubic and SAFT EOS analyses. J Phys Chem B. 2006 Apr 06;110(13):6933-42. doi: 10.1021/jp060143t. PMID: 16571005.
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Breed effect on carcass and meat quality of foals slaughtered at 24months of age.

Meat science

Juárez M, Polvillo O, Gómez MD, Alcalde MJ, Romero F, Valera M.
PMID: 20416753
Meat Sci. 2009 Oct;83(2):224-8. doi: 10.1016/j.meatsci.2009.04.022. Epub 2009 May 08.

In some areas, horsemeat may be considered as an alternative to beef. And recent studies have shown that it may be positive from a nutritional point of view. However, little research has been done on the effects that influence...

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Juárez M, Polvillo O, Gómez MD, et al. Breed effect on carcass and meat quality of foals slaughtered at 24months of age. Meat Sci. 2009;83(2):224-8doi: 10.1016/j.meatsci.2009.04.022.
Juárez, M., Polvillo, O., Gómez, M. D., Alcalde, M. J., Romero, F., & Valera, M. (2009). Breed effect on carcass and meat quality of foals slaughtered at 24months of age. Meat science, 83(2), 224-8. https://doi.org/10.1016/j.meatsci.2009.04.022
Juárez, M, et al. "Breed effect on carcass and meat quality of foals slaughtered at 24months of age." Meat science vol. 83,2 (2009): 224-8. doi: https://doi.org/10.1016/j.meatsci.2009.04.022
Juárez M, Polvillo O, Gómez MD, Alcalde MJ, Romero F, Valera M. Breed effect on carcass and meat quality of foals slaughtered at 24months of age. Meat Sci. 2009 Oct;83(2):224-8. doi: 10.1016/j.meatsci.2009.04.022. Epub 2009 May 08. PMID: 20416753.
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Study of dimethoxyethane/ethanol solutions.

The journal of physical chemistry. B

Aparicio S, Alcalde R, Trenzado JL, Caro MN, Atilhan M.
PMID: 21657264
J Phys Chem B. 2011 Jul 21;115(28):8864-74. doi: 10.1021/jp2029328. Epub 2011 Jun 24.

The unusual properties of poly(ethyleneoxide) + alcohol mixtures were analyzed using a poly(ethylene oxide) monomer (1,2-dimethoxyethane) in ethanol solutions as a model. A collection of thermophysical measurements and computational studies, using density functional theory and classical molecular dynamics approaches,...

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Aparicio S, Alcalde R, Trenzado JL, et al. Study of dimethoxyethane/ethanol solutions. J Phys Chem B. 2011;115(28):8864-74doi: 10.1021/jp2029328.
Aparicio, S., Alcalde, R., Trenzado, J. L., Caro, M. N., & Atilhan, M. (2011). Study of dimethoxyethane/ethanol solutions. The journal of physical chemistry. B, 115(28), 8864-74. https://doi.org/10.1021/jp2029328
Aparicio, Santiago, et al. "Study of dimethoxyethane/ethanol solutions." The journal of physical chemistry. B vol. 115,28 (2011): 8864-74. doi: https://doi.org/10.1021/jp2029328
Aparicio S, Alcalde R, Trenzado JL, Caro MN, Atilhan M. Study of dimethoxyethane/ethanol solutions. J Phys Chem B. 2011 Jul 21;115(28):8864-74. doi: 10.1021/jp2029328. Epub 2011 Jun 24. PMID: 21657264.
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The influence of final conditions on meat colour in light lamb carcasses.

Meat science

Alcalde MJ, Negueruela AI.
PMID: 22061353
Meat Sci. 2001 Feb;57(2):117-23. doi: 10.1016/s0309-1740(00)00041-3.

Tristimulus values (X, Y, Z) and CIELAB colourimetric coordinates have been measured in m. Longissimus dorsi and m. Triceps braquialis caput longum muscles in 86 light carcasses of lambs from different origins. By applying to these data different mathematical...

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Alcalde MJ, Negueruela AI. The influence of final conditions on meat colour in light lamb carcasses. Meat Sci. 2001;57(2):117-23doi: 10.1016/s0309-1740(00)00041-3.
Alcalde, M. J., & Negueruela, A. I. (2001). The influence of final conditions on meat colour in light lamb carcasses. Meat science, 57(2), 117-23. https://doi.org/10.1016/s0309-1740(00)00041-3
Alcalde, M J, and Negueruela, A I. "The influence of final conditions on meat colour in light lamb carcasses." Meat science vol. 57,2 (2001): 117-23. doi: https://doi.org/10.1016/s0309-1740(00)00041-3
Alcalde MJ, Negueruela AI. The influence of final conditions on meat colour in light lamb carcasses. Meat Sci. 2001 Feb;57(2):117-23. doi: 10.1016/s0309-1740(00)00041-3. PMID: 22061353.
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Sequential expression of myc-, ras-, oncogene products and EGF receptor during DMBA-induced tongue carcinogenesis.

International journal of oncology

Shintani S, Matsumura T, Alcalde R, Yoshihama Y.
PMID: 21544433
Int J Oncol. 1996 Apr;8(4):821-6. doi: 10.3892/ijo.8.4.821.

The mechanism leading to development of oral cancer has not been completely understood. It is currently believed that alternation of a number of genes can result in the development of epidermoid carcinomas. In this investigation, we used a 9,10-dimethyl...

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Shintani S, Matsumura T, Alcalde R, et al. Sequential expression of myc-, ras-, oncogene products and EGF receptor during DMBA-induced tongue carcinogenesis. Int J Oncol. 1996;8(4):821-6doi: 10.3892/ijo.8.4.821.
Shintani, S., Matsumura, T., Alcalde, R., & Yoshihama, Y. (1996). Sequential expression of myc-, ras-, oncogene products and EGF receptor during DMBA-induced tongue carcinogenesis. International journal of oncology, 8(4), 821-6. https://doi.org/10.3892/ijo.8.4.821
Shintani, S, et al. "Sequential expression of myc-, ras-, oncogene products and EGF receptor during DMBA-induced tongue carcinogenesis." International journal of oncology vol. 8,4 (1996): 821-6. doi: https://doi.org/10.3892/ijo.8.4.821
Shintani S, Matsumura T, Alcalde R, Yoshihama Y. Sequential expression of myc-, ras-, oncogene products and EGF receptor during DMBA-induced tongue carcinogenesis. Int J Oncol. 1996 Apr;8(4):821-6. doi: 10.3892/ijo.8.4.821. PMID: 21544433.
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Lack of association between interleukin-1 gene polymorphism and prognosis in severe traumatic brain injury patients.

Revista Brasileira de terapia intensiva

Alcalde TF, Regner A, Rodrigues Filho EM, Silveira PC, Grossi GG, Simon D.
PMID: 25307324
Rev Bras Ter Intensiva. 2009 Dec;21(4):343-8.

OBJECTIVE: Traumatic brain injury is the major cause of death among individuals between 1-45 years-old. The outcome of traumatic brain injury may be related to brain susceptibility to the injury and genetic factors. Genes that may affect traumatic brain...

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Alcalde TF, Regner A, Rodrigues Filho EM, et al. Ausência de associação entre polimorfismo do gene da interleucina-1 beta e o prognóstico de pacientes com traumatismo crânio-encefálico grave. Lack of association between interleukin-1 gene polymorphism and prognosis in severe traumatic brain injury patients. Rev Bras Ter Intensiva. 2009;21(4):343-8
Alcalde, T. F., Regner, A., Rodrigues Filho, E. M., Silveira, P. C., Grossi, G. G., & Simon, D. (2009). Ausência de associação entre polimorfismo do gene da interleucina-1 beta e o prognóstico de pacientes com traumatismo crânio-encefálico grave. Lack of association between interleukin-1 gene polymorphism and prognosis in severe traumatic brain injury patients. Revista Brasileira de terapia intensiva, 21(4), 343-8.
Alcalde, Taís Frederes Krämer, et al. "Ausência de associação entre polimorfismo do gene da interleucina-1 beta e o prognóstico de pacientes com traumatismo crânio-encefálico grave." Lack of association between interleukin-1 gene polymorphism and prognosis in severe traumatic brain injury patients. Revista Brasileira de terapia intensiva vol. 21,4 (2009): 343-8.
Alcalde TF, Regner A, Rodrigues Filho EM, Silveira PC, Grossi GG, Simon D. Ausência de associação entre polimorfismo do gene da interleucina-1 beta e o prognóstico de pacientes com traumatismo crânio-encefálico grave. Lack of association between interleukin-1 gene polymorphism and prognosis in severe traumatic brain injury patients. Rev Bras Ter Intensiva. 2009 Dec;21(4):343-8. Portuguese. PMID: 25307324.
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Photoluminescence Study of Ammonium-Free Chemical Bath Deposition of CdS Nanoparticles on Polyester Substrate.

Journal of nanoscience and nanotechnology

Rabelo AC, da Silva MAT, Alcalde AM, Laureto E, Matos R, Bottecchia OL, Marletta A.
PMID: 29634168
J Nanosci Nanotechnol. 2017 Jan;17(1):807-14. doi: 10.1166/jnn.2017.12475.

Self-assembled cadmium sulfide (CdS) thin solid films were synthesized by chemical bath deposition (CBD) technique for different deposition times (20 min.–24 h) on transparent and flexible polyester substrates using sodium acetate complex agent. CBD-CdS films were also deposited on...

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Rabelo AC, da Silva MAT, Alcalde AM, et al. Photoluminescence Study of Ammonium-Free Chemical Bath Deposition of CdS Nanoparticles on Polyester Substrate. J Nanosci Nanotechnol. 2017;17(1):807-14doi: 10.1166/jnn.2017.12475.
Rabelo, A. C., da Silva, M. A. T., Alcalde, A. M., Laureto, E., Matos, R., Bottecchia, O. L., & Marletta, A. (2017). Photoluminescence Study of Ammonium-Free Chemical Bath Deposition of CdS Nanoparticles on Polyester Substrate. Journal of nanoscience and nanotechnology, 17(1), 807-14. https://doi.org/10.1166/jnn.2017.12475
Rabelo, Adriano Cesar, et al. "Photoluminescence Study of Ammonium-Free Chemical Bath Deposition of CdS Nanoparticles on Polyester Substrate." Journal of nanoscience and nanotechnology vol. 17,1 (2017): 807-14. doi: https://doi.org/10.1166/jnn.2017.12475
Rabelo AC, da Silva MAT, Alcalde AM, Laureto E, Matos R, Bottecchia OL, Marletta A. Photoluminescence Study of Ammonium-Free Chemical Bath Deposition of CdS Nanoparticles on Polyester Substrate. J Nanosci Nanotechnol. 2017 Jan;17(1):807-14. doi: 10.1166/jnn.2017.12475. PMID: 29634168.
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Showing 1 to 12 of 222 entries