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Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

pipeline programs

Addo-Quaye C, Axtell MJ, Bartel DP, Eshoo TW.
GSID: DGXfo6qJeVsJ
C Addo-Quaye, TW Eshoo, DP Bartel, MJ Axtell - Current Biology, 2008 - Elsevier

MicroRNAs (miRNAs) regulate the expression of target mRNAs in plants and animals [1]. Plant miRNA targets have been predicted on the basis of their extensive and often …

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Addo-Quaye, C., Eshoo, T. W., Bartel, D. P., & Axtell, M. J. (2008). Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome. Current Biology, 18(10), 758-762.
Addo-Quaye, Charles, et al. "Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome." Current Biology 18.10 (2008): 758-762.
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Enantioselective Synthesis of Guaianolides in the Osmitopsin Family by Domino Metathesis.

Organic letters

Barthel A, Kaden F, Jäger A, Metz P.
PMID: 27333451
Org Lett. 2016 Jul 01;18(13):3298-301. doi: 10.1021/acs.orglett.6b01619. Epub 2016 Jun 22.

Relay metathesis enabled an improved access from (S)-citronellal to the marine trisnorguaiane (-)-clavukerin A. This hydroazulene was applied as an advantageously functionalized building block for the asymmetric synthesis of the sesquiterpene lactone osmitopsin and the proposed structure of 4,5-epoxyosmitopsin...

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Barthel A, Kaden F, Jäger A, et al. Enantioselective Synthesis of Guaianolides in the Osmitopsin Family by Domino Metathesis. Org Lett. 2016;18(13):3298-301doi: 10.1021/acs.orglett.6b01619.
Barthel, A., Kaden, F., Jäger, A., & Metz, P. (2016). Enantioselective Synthesis of Guaianolides in the Osmitopsin Family by Domino Metathesis. Organic letters, 18(13), 3298-301. https://doi.org/10.1021/acs.orglett.6b01619
Barthel, André, et al. "Enantioselective Synthesis of Guaianolides in the Osmitopsin Family by Domino Metathesis." Organic letters vol. 18,13 (2016): 3298-301. doi: https://doi.org/10.1021/acs.orglett.6b01619
Barthel A, Kaden F, Jäger A, Metz P. Enantioselective Synthesis of Guaianolides in the Osmitopsin Family by Domino Metathesis. Org Lett. 2016 Jul 01;18(13):3298-301. doi: 10.1021/acs.orglett.6b01619. Epub 2016 Jun 22. PMID: 27333451.
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Surface Fraction Dependence of Contact Angles Induced by Kinks in the Triple Line.

Physical review letters

Rivetti M, Teisseire J, Barthel E.
PMID: 26182109
Phys Rev Lett. 2015 Jul 03;115(1):016101. doi: 10.1103/PhysRevLett.115.016101. Epub 2015 Jun 30.

On periodic superhydrophobic surfaces the receding contact angle often scales with the surface fraction, as expected from a simple rule of mixture, the Cassie relation. However, it has been argued that energy averaging breaks down owing to line pinning,...

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Rivetti M, Teisseire J, Barthel E. Surface Fraction Dependence of Contact Angles Induced by Kinks in the Triple Line. Phys Rev Lett. 2015;115(1):016101doi: 10.1103/PhysRevLett.115.016101.
Rivetti, M., Teisseire, J., & Barthel, E. (2015). Surface Fraction Dependence of Contact Angles Induced by Kinks in the Triple Line. Physical review letters, 115(1), 016101. https://doi.org/10.1103/PhysRevLett.115.016101
Rivetti, M, et al. "Surface Fraction Dependence of Contact Angles Induced by Kinks in the Triple Line." Physical review letters vol. 115,1 (2015): 016101. doi: https://doi.org/10.1103/PhysRevLett.115.016101
Rivetti M, Teisseire J, Barthel E. Surface Fraction Dependence of Contact Angles Induced by Kinks in the Triple Line. Phys Rev Lett. 2015 Jul 03;115(1):016101. doi: 10.1103/PhysRevLett.115.016101. Epub 2015 Jun 30. PMID: 26182109.
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[Erratum to: Refixation of the biceps tendon onto the radial tuberosity using two suture anchors].

Operative Orthopadie und Traumatologie

Konrads C, Rueckl K, Barthel T, Walcher M, Rudert M, Plumhoff P.
PMID: 28536809
Oper Orthop Traumatol. 2017 Aug;29(4):305. doi: 10.1007/s00064-017-0505-9.

No abstract available.

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Konrads C, Rueckl K, Barthel T, et al. Erratum zu: Refixation der distalen Bizepssehne an der Tuberositas radii mit zwei Spreizankern. [Erratum to: Refixation of the biceps tendon onto the radial tuberosity using two suture anchors]. Oper Orthop Traumatol. 2017;29(4):305doi: 10.1007/s00064-017-0505-9.
Konrads, C., Rueckl, K., Barthel, T., Walcher, M., Rudert, M., & Plumhoff, P. (2017). Erratum zu: Refixation der distalen Bizepssehne an der Tuberositas radii mit zwei Spreizankern. [Erratum to: Refixation of the biceps tendon onto the radial tuberosity using two suture anchors]. Operative Orthopadie und Traumatologie, 29(4), 305. https://doi.org/10.1007/s00064-017-0505-9
Konrads, C, et al. "Erratum zu: Refixation der distalen Bizepssehne an der Tuberositas radii mit zwei Spreizankern." [Erratum to: Refixation of the biceps tendon onto the radial tuberosity using two suture anchors]. Operative Orthopadie und Traumatologie vol. 29,4 (2017): 305. doi: https://doi.org/10.1007/s00064-017-0505-9
Konrads C, Rueckl K, Barthel T, Walcher M, Rudert M, Plumhoff P. Erratum zu: Refixation der distalen Bizepssehne an der Tuberositas radii mit zwei Spreizankern. [Erratum to: Refixation of the biceps tendon onto the radial tuberosity using two suture anchors]. Oper Orthop Traumatol. 2017 Aug;29(4):305. doi: 10.1007/s00064-017-0505-9. German. PMID: 28536809.
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On the origin of differential phase contrast at a locally charged and globally charge-compensated domain boundary in a polar-ordered material.

Ultramicroscopy

MacLaren I, Wang L, McGrouther D, Craven AJ, McVitie S, Schierholz R, Kovács A, Barthel J, Dunin-Borkowski RE.
PMID: 25837677
Ultramicroscopy. 2015 Jul;154:57-63. doi: 10.1016/j.ultramic.2015.03.016. Epub 2015 Mar 19.

Differential phase contrast (DPC) imaging in the scanning transmission electron microscope is applied to the study of a charged antiphase domain boundary in doped bismuth ferrite. A clear differential signal is seen, which matches the expected direction of the...

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MacLaren I, Wang L, McGrouther D, et al. On the origin of differential phase contrast at a locally charged and globally charge-compensated domain boundary in a polar-ordered material. Ultramicroscopy. 2015;154:57-63doi: 10.1016/j.ultramic.2015.03.016.
MacLaren, I., Wang, L., McGrouther, D., Craven, A. J., McVitie, S., Schierholz, R., Kovács, A., Barthel, J., & Dunin-Borkowski, R. E. (2015). On the origin of differential phase contrast at a locally charged and globally charge-compensated domain boundary in a polar-ordered material. Ultramicroscopy, 15457-63. https://doi.org/10.1016/j.ultramic.2015.03.016
MacLaren, Ian, et al. "On the origin of differential phase contrast at a locally charged and globally charge-compensated domain boundary in a polar-ordered material." Ultramicroscopy vol. 154 (2015): 57-63. doi: https://doi.org/10.1016/j.ultramic.2015.03.016
MacLaren I, Wang L, McGrouther D, Craven AJ, McVitie S, Schierholz R, Kovács A, Barthel J, Dunin-Borkowski RE. On the origin of differential phase contrast at a locally charged and globally charge-compensated domain boundary in a polar-ordered material. Ultramicroscopy. 2015 Jul;154:57-63. doi: 10.1016/j.ultramic.2015.03.016. Epub 2015 Mar 19. PMID: 25837677.
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Phase Diagram of an Extended Quantum Dimer Model on the Hexagonal Lattice.

Physical review letters

Schlittler T, Barthel T, Misguich G, Vidal J, Mosseri R.
PMID: 26636869
Phys Rev Lett. 2015 Nov 20;115(21):217202. doi: 10.1103/PhysRevLett.115.217202. Epub 2015 Nov 18.

We introduce a quantum dimer model on the hexagonal lattice that, in addition to the standard three-dimer kinetic and potential terms, includes a competing potential part counting dimer-free hexagons. The zero-temperature phase diagram is studied by means of quantum...

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Schlittler T, Barthel T, Misguich G, et al. Phase Diagram of an Extended Quantum Dimer Model on the Hexagonal Lattice. Phys Rev Lett. 2015;115(21):217202doi: 10.1103/PhysRevLett.115.217202.
Schlittler, T., Barthel, T., Misguich, G., Vidal, J., & Mosseri, R. (2015). Phase Diagram of an Extended Quantum Dimer Model on the Hexagonal Lattice. Physical review letters, 115(21), 217202. https://doi.org/10.1103/PhysRevLett.115.217202
Schlittler, Thiago, et al. "Phase Diagram of an Extended Quantum Dimer Model on the Hexagonal Lattice." Physical review letters vol. 115,21 (2015): 217202. doi: https://doi.org/10.1103/PhysRevLett.115.217202
Schlittler T, Barthel T, Misguich G, Vidal J, Mosseri R. Phase Diagram of an Extended Quantum Dimer Model on the Hexagonal Lattice. Phys Rev Lett. 2015 Nov 20;115(21):217202. doi: 10.1103/PhysRevLett.115.217202. Epub 2015 Nov 18. PMID: 26636869.
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Desiccation tolerance in resurrection plants: new insights from transcriptome, proteome and metabolome analysis.

Frontiers in plant science

Dinakar C, Bartels D.
PMID: 24348488
Front Plant Sci. 2013 Nov 28;4:482. doi: 10.3389/fpls.2013.00482. eCollection 2013.

Most higher plants are unable to survive desiccation to an air-dried state. An exception is a small group of vascular angiosperm plants, termed resurrection plants. They have evolved unique mechanisms of desiccation tolerance and thus can tolerate severe water...

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Dinakar C, Bartels D. Desiccation tolerance in resurrection plants: new insights from transcriptome, proteome and metabolome analysis. Front Plant Sci. 2013;4:482doi: 10.3389/fpls.2013.00482.
Dinakar, C., & Bartels, D. (2013). Desiccation tolerance in resurrection plants: new insights from transcriptome, proteome and metabolome analysis. Frontiers in plant science, 4482. https://doi.org/10.3389/fpls.2013.00482
Dinakar, Challabathula, and Bartels, Dorothea. "Desiccation tolerance in resurrection plants: new insights from transcriptome, proteome and metabolome analysis." Frontiers in plant science vol. 4 (2013): 482. doi: https://doi.org/10.3389/fpls.2013.00482
Dinakar C, Bartels D. Desiccation tolerance in resurrection plants: new insights from transcriptome, proteome and metabolome analysis. Front Plant Sci. 2013 Nov 28;4:482. doi: 10.3389/fpls.2013.00482. eCollection 2013. PMID: 24348488; PMCID: PMC3842845.
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Scatter analysis and correction for ultrafast X-ray tomography.

Philosophical transactions. Series A, Mathematical, physical, and engineering sciences

Wagner M, Barthel F, Zalucky J, Bieberle M, Hampel U.
PMID: 25939622
Philos Trans A Math Phys Eng Sci. 2015 Jun 13;373(2043). doi: 10.1098/rsta.2014.0396.

Ultrafast X-ray computed tomography (CT) is an imaging technique with high potential for the investigation of the hydrodynamics in multiphase flows. For correct determination of the phase distribution of such flows, a high accuracy of the reconstructed image data...

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Wagner M, Barthel F, Zalucky J, et al. Scatter analysis and correction for ultrafast X-ray tomography. Philos Trans A Math Phys Eng Sci. 2015;373(2043)doi: 10.1098/rsta.2014.0396.
Wagner, M., Barthel, F., Zalucky, J., Bieberle, M., & Hampel, U. (2015). Scatter analysis and correction for ultrafast X-ray tomography. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 373(2043), . https://doi.org/10.1098/rsta.2014.0396
Wagner, Michael, et al. "Scatter analysis and correction for ultrafast X-ray tomography." Philosophical transactions. Series A, Mathematical, physical, and engineering sciences vol. 373,2043 (2015). doi: https://doi.org/10.1098/rsta.2014.0396
Wagner M, Barthel F, Zalucky J, Bieberle M, Hampel U. Scatter analysis and correction for ultrafast X-ray tomography. Philos Trans A Math Phys Eng Sci. 2015 Jun 13;373(2043). doi: 10.1098/rsta.2014.0396. PMID: 25939622.
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Beta-amyloid imaging with florbetaben.

Clinical and translational imaging

Sabri O, Seibyl J, Rowe C, Barthel H.
PMID: 25741488
Clin Transl Imaging. 2015;3(1):13-26. doi: 10.1007/s40336-015-0102-6. Epub 2015 Feb 12.

Florbetaben is a fluorine-18 (

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Sabri O, Seibyl J, Rowe C, et al. Beta-amyloid imaging with florbetaben. Clin Transl Imaging. 2015;3(1):13-26doi: 10.1007/s40336-015-0102-6.
Sabri, O., Seibyl, J., Rowe, C., & Barthel, H. (2015). Beta-amyloid imaging with florbetaben. Clinical and translational imaging, 3(1), 13-26. https://doi.org/10.1007/s40336-015-0102-6
Sabri, Osama, et al. "Beta-amyloid imaging with florbetaben." Clinical and translational imaging vol. 3,1 (2015): 13-26. doi: https://doi.org/10.1007/s40336-015-0102-6
Sabri O, Seibyl J, Rowe C, Barthel H. Beta-amyloid imaging with florbetaben. Clin Transl Imaging. 2015;3(1):13-26. doi: 10.1007/s40336-015-0102-6. Epub 2015 Feb 12. PMID: 25741488; PMCID: PMC4339690.
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Post-extrasystolic Blood Pressure Potentiation as a Risk Predictor in Cardiac Patients.

Arrhythmia & electrophysiology review

Steger A, Sinnecker D, Barthel P, Müller A, Gebhardt J, Schmidt G.
PMID: 27403290
Arrhythm Electrophysiol Rev. 2016 May;5(1):27-30. doi: 10.15420/aer.2016.14.2.

For more than 100 years physicians have observed that heartbeats following extrasystolic beats are characterised by augmented myocardial contractility. This phenomenon was termed post-extrasystolic potentiation (PESP). In the 1970s it was first noted that PESP measured at the blood...

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Steger A, Sinnecker D, Barthel P, et al. Post-extrasystolic Blood Pressure Potentiation as a Risk Predictor in Cardiac Patients. Arrhythm Electrophysiol Rev. 2016;5(1):27-30doi: 10.15420/aer.2016.14.2.
Steger, A., Sinnecker, D., Barthel, P., Müller, A., Gebhardt, J., & Schmidt, G. (2016). Post-extrasystolic Blood Pressure Potentiation as a Risk Predictor in Cardiac Patients. Arrhythmia & electrophysiology review, 5(1), 27-30. https://doi.org/10.15420/aer.2016.14.2
Steger, Alexander, et al. "Post-extrasystolic Blood Pressure Potentiation as a Risk Predictor in Cardiac Patients." Arrhythmia & electrophysiology review vol. 5,1 (2016): 27-30. doi: https://doi.org/10.15420/aer.2016.14.2
Steger A, Sinnecker D, Barthel P, Müller A, Gebhardt J, Schmidt G. Post-extrasystolic Blood Pressure Potentiation as a Risk Predictor in Cardiac Patients. Arrhythm Electrophysiol Rev. 2016 May;5(1):27-30. doi: 10.15420/aer.2016.14.2. PMID: 27403290; PMCID: PMC4939308.
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Performance of a direct detection camera for off-axis electron holography.

Ultramicroscopy

Chang SLY, Dwyer C, Barthel J, Boothroyd CB, Dunin-Borkowski RE.
PMID: 26630072
Ultramicroscopy. 2016 Feb;161:90-97. doi: 10.1016/j.ultramic.2015.09.004. Epub 2015 Oct 19.

The performance of a direct detection camera (DDC) is evaluated in the context of off-axis electron holographic experiments in a transmission electron microscope. Its performance is also compared directly with that of a conventional charge-coupled device (CCD) camera. The...

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Chang SLY, Dwyer C, Barthel J, et al. Performance of a direct detection camera for off-axis electron holography. Ultramicroscopy. 2015;161:90-97doi: 10.1016/j.ultramic.2015.09.004.
Chang, S. L. Y., Dwyer, C., Barthel, J., Boothroyd, C. B., & Dunin-Borkowski, R. E. (2016). Performance of a direct detection camera for off-axis electron holography. Ultramicroscopy, 16190-97. https://doi.org/10.1016/j.ultramic.2015.09.004
Chang, Shery L Y, et al. "Performance of a direct detection camera for off-axis electron holography." Ultramicroscopy vol. 161 (2016): 90-97. doi: https://doi.org/10.1016/j.ultramic.2015.09.004
Chang SLY, Dwyer C, Barthel J, Boothroyd CB, Dunin-Borkowski RE. Performance of a direct detection camera for off-axis electron holography. Ultramicroscopy. 2016 Feb;161:90-97. doi: 10.1016/j.ultramic.2015.09.004. Epub 2015 Oct 19. PMID: 26630072.
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An axially bridged indium phthalocyanine dimer with an IN[bond]IN bond.

Angewandte Chemie (International ed. in English)

Chen Y, Barthel M, Seiler M, Subramanian LR, Bertagnolli H, Hanack M.
PMID: 12207401
Angew Chem Int Ed Engl. 2002 Sep 02;41(17):3239-42. doi: 10.1002/1521-3773(20020902)41:17<3239::AID-ANIE3239>3.0.CO;2-F.

No abstract available.

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Chen Y, Barthel M, Seiler M, et al. An axially bridged indium phthalocyanine dimer with an IN[bond]IN bond. Angew Chem Int Ed Engl. 2002;41(17):3239-42doi: 10.1002/1521-3773(20020902)41:17<3239::AID-ANIE3239>3.0.CO;2-F.
Chen, Y., Barthel, M., Seiler, M., Subramanian, L. R., Bertagnolli, H., & Hanack, M. (2002). An axially bridged indium phthalocyanine dimer with an IN[bond]IN bond. Angewandte Chemie (International ed. in English), 41(17), 3239-42. https://doi.org/10.1002/1521-3773(20020902)41:17<3239::AID-ANIE3239>3.0.CO;2-F
Chen, Yu, et al. "An axially bridged indium phthalocyanine dimer with an IN[bond]IN bond." Angewandte Chemie (International ed. in English) vol. 41,17 (2002): 3239-42. doi: https://doi.org/10.1002/1521-3773(20020902)41:17<3239::AID-ANIE3239>3.0.CO;2-F
Chen Y, Barthel M, Seiler M, Subramanian LR, Bertagnolli H, Hanack M. An axially bridged indium phthalocyanine dimer with an IN[bond]IN bond. Angew Chem Int Ed Engl. 2002 Sep 02;41(17):3239-42. doi: 10.1002/1521-3773(20020902)41:17<3239::AID-ANIE3239>3.0.CO;2-F. PMID: 12207401.
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Showing 1 to 12 of 338 entries