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A comparison of a campus cluster and open science grid platforms for protein-guided assembly using pegasus workflow management system

science campus

Pavlovikj N, Begcy K, Behera S.
GSID: fuL6qoqydO0J
N Pavlovikj, K Begcy, S Behera… - … Parallel & Distributed …, 2014 - ieeexplore.ieee.org

… We chose two execution platforms for this workflow that represent the campus cluster, Sandhills, and the Open Science Grid. Furthermore, … Section 4 includes overview of the used execution platforms, the campus cluster and the Open Science Grid....

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Pavlovikj, N., Begcy, K., Behera, S., Campbell, M., Walia, H., & Deogun, J. S. (2014, May). A comparison of a campus cluster and open science grid platforms for protein-guided assembly using pegasus workflow management system. In 2014 IEEE International Parallel & Distributed Processing Symposium Workshops (pp. 546-555). IEEE.
Pavlovikj, Natasha, et al. "A comparison of a campus cluster and open science grid platforms for protein-guided assembly using pegasus workflow management system." 2014 IEEE International Parallel & Distributed Processing Symposium Workshops. IEEE, 2014.
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Transbronchial lung biopsy with a flexible cryoprobe: First case report from India.

Lung India : official organ of Indian Chest Society

Dhooria S, Bal A, Sehgal IS, Aggarwal AN, Behera D, Agarwal R.
PMID: 26933310
Lung India. 2016 Jan-Feb;33(1):64-8. doi: 10.4103/0970-2113.173066.

Sarcoidosis and tuberculosis are granulomatous disorders that mimic each other both clinically and radiologically. Both can present with fever and pulmonary nodules and often require the performance of transbronchial lung biopsy (TBLB) for diagnosis. In recent studies, the flexible...

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Dhooria S, Bal A, Sehgal IS, et al. Transbronchial lung biopsy with a flexible cryoprobe: First case report from India. Lung India. 2016;33(1):64-8doi: 10.4103/0970-2113.173066.
Dhooria, S., Bal, A., Sehgal, I. S., Aggarwal, A. N., Behera, D., & Agarwal, R. (2016). Transbronchial lung biopsy with a flexible cryoprobe: First case report from India. Lung India : official organ of Indian Chest Society, 33(1), 64-8. https://doi.org/10.4103/0970-2113.173066
Dhooria, Sahajal, et al. "Transbronchial lung biopsy with a flexible cryoprobe: First case report from India." Lung India : official organ of Indian Chest Society vol. 33,1 (2016): 64-8. doi: https://doi.org/10.4103/0970-2113.173066
Dhooria S, Bal A, Sehgal IS, Aggarwal AN, Behera D, Agarwal R. Transbronchial lung biopsy with a flexible cryoprobe: First case report from India. Lung India. 2016 Jan-Feb;33(1):64-8. doi: 10.4103/0970-2113.173066. PMID: 26933310; PMCID: PMC4748668.
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Use of cryoprobe for removal of a large tracheobronchial foreign body during flexible bronchoscopy.

Lung India : official organ of Indian Chest Society

Sehgal IS, Dhooria S, Behera D, Agarwal R.
PMID: 27625452
Lung India. 2016 Sep-Oct;33(5):543-5. doi: 10.4103/0970-2113.188978.

Foreign body (FB) inhalation in the tracheobronchial tree is an infrequently encountered event in adults. The diagnosis is suspected in the presence of a clinical history of aspiration and the presence of respiratory symptoms. Management involves confirmation by flexible...

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Sehgal IS, Dhooria S, Behera D, et al. Use of cryoprobe for removal of a large tracheobronchial foreign body during flexible bronchoscopy. Lung India. 2016;33(5):543-5doi: 10.4103/0970-2113.188978.
Sehgal, I. S., Dhooria, S., Behera, D., & Agarwal, R. (2016). Use of cryoprobe for removal of a large tracheobronchial foreign body during flexible bronchoscopy. Lung India : official organ of Indian Chest Society, 33(5), 543-5. https://doi.org/10.4103/0970-2113.188978
Sehgal, Inderpaul Singh, et al. "Use of cryoprobe for removal of a large tracheobronchial foreign body during flexible bronchoscopy." Lung India : official organ of Indian Chest Society vol. 33,5 (2016): 543-5. doi: https://doi.org/10.4103/0970-2113.188978
Sehgal IS, Dhooria S, Behera D, Agarwal R. Use of cryoprobe for removal of a large tracheobronchial foreign body during flexible bronchoscopy. Lung India. 2016 Sep-Oct;33(5):543-5. doi: 10.4103/0970-2113.188978. PMID: 27625452; PMCID: PMC5006338.
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Triamide macrocyclic chloride receptors via a one-pot tandem reduction-condensation-cyclization reaction.

Organic & biomolecular chemistry

Behera H, Ramkumar V, Madhavan N.
PMID: 28485420
Org Biomol Chem. 2017 Jun 14;15(23):4937-4940. doi: 10.1039/c7ob00642j.

A pyridine containing triamide macrocycle and its substituted analog have been synthesized in one pot from the corresponding monomer without the use of coupling reagents. The macrocycle can selectively bind chloride ions. The ease of synthesis and chloride-binding properties...

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Behera H, Ramkumar V, Madhavan N. Triamide macrocyclic chloride receptors via a one-pot tandem reduction-condensation-cyclization reaction. Org Biomol Chem. 2017;15(23):4937-4940doi: 10.1039/c7ob00642j.
Behera, H., Ramkumar, V., & Madhavan, N. (2017). Triamide macrocyclic chloride receptors via a one-pot tandem reduction-condensation-cyclization reaction. Organic & biomolecular chemistry, 15(23), 4937-4940. https://doi.org/10.1039/c7ob00642j
Behera, Harekrushna, et al. "Triamide macrocyclic chloride receptors via a one-pot tandem reduction-condensation-cyclization reaction." Organic & biomolecular chemistry vol. 15,23 (2017): 4937-4940. doi: https://doi.org/10.1039/c7ob00642j
Behera H, Ramkumar V, Madhavan N. Triamide macrocyclic chloride receptors via a one-pot tandem reduction-condensation-cyclization reaction. Org Biomol Chem. 2017 Jun 14;15(23):4937-4940. doi: 10.1039/c7ob00642j. PMID: 28485420.
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Micro-tensile bond strength of different adhesive systems on sound dentin and resin-based composite: An in-vitro study.

Journal of conservative dentistry : JCD

Mallick R, Sarangi P, Mohanty S, Behera S, Nanda S, Satapathy SK.
PMID: 26430301
J Conserv Dent. 2015 Sep-Oct;18(5):379-83. doi: 10.4103/0972-0707.164036.

AIM: To analyze the difference in the micro-tensile bond strength of specimens made with two different adhesive systems and compare them with two homogenous substrates.MATERIALS AND METHODS: Sixty permanent mandibular molars were mounted in acrylic blocks and sectioned with...

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Mallick R, Sarangi P, Mohanty S, et al. Micro-tensile bond strength of different adhesive systems on sound dentin and resin-based composite: An in-vitro study. J Conserv Dent. 2015;18(5):379-83doi: 10.4103/0972-0707.164036.
Mallick, R., Sarangi, P., Mohanty, S., Behera, S., Nanda, S., & Satapathy, S. K. (2015). Micro-tensile bond strength of different adhesive systems on sound dentin and resin-based composite: An in-vitro study. Journal of conservative dentistry : JCD, 18(5), 379-83. https://doi.org/10.4103/0972-0707.164036
Mallick, Rashmirekha, et al. "Micro-tensile bond strength of different adhesive systems on sound dentin and resin-based composite: An in-vitro study." Journal of conservative dentistry : JCD vol. 18,5 (2015): 379-83. doi: https://doi.org/10.4103/0972-0707.164036
Mallick R, Sarangi P, Mohanty S, Behera S, Nanda S, Satapathy SK. Micro-tensile bond strength of different adhesive systems on sound dentin and resin-based composite: An in-vitro study. J Conserv Dent. 2015 Sep-Oct;18(5):379-83. doi: 10.4103/0972-0707.164036. PMID: 26430301; PMCID: PMC4578182.
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Portal cavernoma cholangiopathy: consensus statement of a working party of the Indian national association for study of the liver.

Journal of clinical and experimental hepatology

Dhiman RK, Saraswat VA, Valla DC, Chawla Y, Behera A, Varma V, Agarwal S, Duseja A, Puri P, Kalra N, Rameshbabu CS, Bhatia V, Sharma M, Kumar M, Gupta S, Taneja S, Kaman L, Zargar SA, Nundy S, Singh SP, Acharya SK, Dilawari JB.
PMID: 25755591
J Clin Exp Hepatol. 2014 Feb;4:S2-S14. doi: 10.1016/j.jceh.2014.02.003. Epub 2014 Feb 25.

Portal cavernoma cholangiopathy (PCC) is defined as abnormalities in the extrahepatic biliary system including the cystic duct and gallbladder with or without abnormalities in the 1st and 2nd generation biliary ducts in a patient with portal cavernoma. Presence of...

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Dhiman RK, Saraswat VA, Valla DC, et al. Portal cavernoma cholangiopathy: consensus statement of a working party of the Indian national association for study of the liver. J Clin Exp Hepatol. 2014;4:S2-S14doi: 10.1016/j.jceh.2014.02.003.
Dhiman, R. K., Saraswat, V. A., Valla, D. C., Chawla, Y., Behera, A., Varma, V., Agarwal, S., Duseja, A., Puri, P., Kalra, N., Rameshbabu, C. S., Bhatia, V., Sharma, M., Kumar, M., Gupta, S., Taneja, S., Kaman, L., Zargar, S. A., Nundy, S., Singh, S. P., Acharya, S. K., & Dilawari, J. B. (2014). Portal cavernoma cholangiopathy: consensus statement of a working party of the Indian national association for study of the liver. Journal of clinical and experimental hepatology, 4S2-S14. https://doi.org/10.1016/j.jceh.2014.02.003
Dhiman, Radha K, et al. "Portal cavernoma cholangiopathy: consensus statement of a working party of the Indian national association for study of the liver." Journal of clinical and experimental hepatology vol. 4 (2014): S2-S14. doi: https://doi.org/10.1016/j.jceh.2014.02.003
Dhiman RK, Saraswat VA, Valla DC, Chawla Y, Behera A, Varma V, Agarwal S, Duseja A, Puri P, Kalra N, Rameshbabu CS, Bhatia V, Sharma M, Kumar M, Gupta S, Taneja S, Kaman L, Zargar SA, Nundy S, Singh SP, Acharya SK, Dilawari JB. Portal cavernoma cholangiopathy: consensus statement of a working party of the Indian national association for study of the liver. J Clin Exp Hepatol. 2014 Feb;4:S2-S14. doi: 10.1016/j.jceh.2014.02.003. Epub 2014 Feb 25. PMID: 25755591; PMCID: PMC4274351.
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Nonuniversality and Finite Dissipation in Decaying Magnetohydrodynamic Turbulence.

Physical review letters

Linkmann MF, Berera A, McComb WD, McKay ME.
PMID: 26196807
Phys Rev Lett. 2015 Jun 12;114(23):235001. doi: 10.1103/PhysRevLett.114.235001. Epub 2015 Jun 11.

A model equation for the Reynolds number dependence of the dimensionless dissipation rate in freely decaying homogeneous magnetohydrodynamic turbulence in the absence of a mean magnetic field is derived from the real-space energy balance equation, leading to Cϵ=Cϵ,∞+C/R-+O(1/R-(2)), where...

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Linkmann MF, Berera A, McComb WD, et al. Nonuniversality and Finite Dissipation in Decaying Magnetohydrodynamic Turbulence. Phys Rev Lett. 2015;114(23):235001doi: 10.1103/PhysRevLett.114.235001.
Linkmann, M. F., Berera, A., McComb, W. D., & McKay, M. E. (2015). Nonuniversality and Finite Dissipation in Decaying Magnetohydrodynamic Turbulence. Physical review letters, 114(23), 235001. https://doi.org/10.1103/PhysRevLett.114.235001
Linkmann, M F, et al. "Nonuniversality and Finite Dissipation in Decaying Magnetohydrodynamic Turbulence." Physical review letters vol. 114,23 (2015): 235001. doi: https://doi.org/10.1103/PhysRevLett.114.235001
Linkmann MF, Berera A, McComb WD, McKay ME. Nonuniversality and Finite Dissipation in Decaying Magnetohydrodynamic Turbulence. Phys Rev Lett. 2015 Jun 12;114(23):235001. doi: 10.1103/PhysRevLett.114.235001. Epub 2015 Jun 11. PMID: 26196807.
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Studies of the macroscopic and microscopic morphology (hippocampus) of brain in Vencobb broiler.

Veterinary world

Gupta SK, Behera K, Pradhan CR, Mandal AK, Sethy K, Behera D, Shinde KP.
PMID: 27284228
Vet World. 2016 May;9(5):507-11. doi: 10.14202/vetworld.2016.507-511. Epub 2016 May 24.

AIM: The aim of this study was to study the anatomy of different parts of brain and histology of hippocampus of Vencobb broiler chicken.MATERIALS AND METHODS: A 12 adult experimental birds were sacrificed by cervical dislocation. After separation of...

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Gupta SK, Behera K, Pradhan CR, et al. Studies of the macroscopic and microscopic morphology (hippocampus) of brain in Vencobb broiler. Vet World. 2016;9(5):507-11doi: 10.14202/vetworld.2016.507-511.
Gupta, S. K., Behera, K., Pradhan, C. R., Mandal, A. K., Sethy, K., Behera, D., & Shinde, K. P. (2016). Studies of the macroscopic and microscopic morphology (hippocampus) of brain in Vencobb broiler. Veterinary world, 9(5), 507-11. https://doi.org/10.14202/vetworld.2016.507-511
Gupta, Shailesh Kumar, et al. "Studies of the macroscopic and microscopic morphology (hippocampus) of brain in Vencobb broiler." Veterinary world vol. 9,5 (2016): 507-11. doi: https://doi.org/10.14202/vetworld.2016.507-511
Gupta SK, Behera K, Pradhan CR, Mandal AK, Sethy K, Behera D, Shinde KP. Studies of the macroscopic and microscopic morphology (hippocampus) of brain in Vencobb broiler. Vet World. 2016 May;9(5):507-11. doi: 10.14202/vetworld.2016.507-511. Epub 2016 May 24. PMID: 27284228; PMCID: PMC4893723.
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Disseminated Kaposi's Sarcoma in an HIV-Positive Patient: A Rare Entity in an Indian Patient.

Indian journal of dermatology

Behera B, Chandrashekar L, Thappa DM, Toi PCh, Vinod KV.
PMID: 27293276
Indian J Dermatol. 2016 May-Jun;61(3):348. doi: 10.4103/0019-5154.182466.

AIDS-associated disseminated Kaposi sarcoma (KS) is a rare entity, especially in India due to the low prevalence of human herpes virus-8 infections in Indian population. Due to its rapid and progressive nature, early diagnosis and institution of highly active...

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Behera B, Chandrashekar L, Thappa DM, et al. Disseminated Kaposi's Sarcoma in an HIV-Positive Patient: A Rare Entity in an Indian Patient. Indian J Dermatol. 2016;61(3):348doi: 10.4103/0019-5154.182466.
Behera, B., Chandrashekar, L., Thappa, D. M., Toi, P. C. h., & Vinod, K. V. (2016). Disseminated Kaposi's Sarcoma in an HIV-Positive Patient: A Rare Entity in an Indian Patient. Indian journal of dermatology, 61(3), 348. https://doi.org/10.4103/0019-5154.182466
Behera, Biswanath, et al. "Disseminated Kaposi's Sarcoma in an HIV-Positive Patient: A Rare Entity in an Indian Patient." Indian journal of dermatology vol. 61,3 (2016): 348. doi: https://doi.org/10.4103/0019-5154.182466
Behera B, Chandrashekar L, Thappa DM, Toi PCh, Vinod KV. Disseminated Kaposi's Sarcoma in an HIV-Positive Patient: A Rare Entity in an Indian Patient. Indian J Dermatol. 2016 May-Jun;61(3):348. doi: 10.4103/0019-5154.182466. PMID: 27293276; PMCID: PMC4885209.
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Protein-L-Isoaspartyl Methyltransferase (PIMT) Is Required for Survival of .

Frontiers in microbiology

Pesingi PK, Kumawat M, Behera P, Dixit SK, Agarwal RK, Goswami TK, Mahawar M.
PMID: 28326072
Front Microbiol. 2017 Mar 07;8:361. doi: 10.3389/fmicb.2017.00361. eCollection 2017.

Poultry birds are asymptomatic reservoir of

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Pesingi PK, Kumawat M, Behera P, et al. Protein-L-Isoaspartyl Methyltransferase (PIMT) Is Required for Survival of . Front Microbiol. 2017;8:361doi: 10.3389/fmicb.2017.00361.
Pesingi, P. K., Kumawat, M., Behera, P., Dixit, S. K., Agarwal, R. K., Goswami, T. K., & Mahawar, M. (2017). Protein-L-Isoaspartyl Methyltransferase (PIMT) Is Required for Survival of . Frontiers in microbiology, 8361. https://doi.org/10.3389/fmicb.2017.00361
Pesingi, Pavan K, et al. "Protein-L-Isoaspartyl Methyltransferase (PIMT) Is Required for Survival of ." Frontiers in microbiology vol. 8 (2017): 361. doi: https://doi.org/10.3389/fmicb.2017.00361
Pesingi PK, Kumawat M, Behera P, Dixit SK, Agarwal RK, Goswami TK, Mahawar M. Protein-L-Isoaspartyl Methyltransferase (PIMT) Is Required for Survival of . Front Microbiol. 2017 Mar 07;8:361. doi: 10.3389/fmicb.2017.00361. eCollection 2017. PMID: 28326072; PMCID: PMC5339242.
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Fatal corrosive ingestion: A study from South and South-East Delhi, India (2005-2014).

Medicine, science, and the law

Swain R, Behera C, Gupta SK.
PMID: 27400703
Med Sci Law. 2016 Oct;56(4):252-257. doi: 10.1177/0025802416657762. Epub 2016 Jul 10.

The study presents a retrospective analysis of 64 cases of death resulting from ingestion of corrosive substances. The cases represented approximately 0.4% of all autopsies conducted and 13.6% of all fatal poisonings studied during the 10-year period from January...

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Swain R, Behera C, Gupta SK. Fatal corrosive ingestion: A study from South and South-East Delhi, India (2005-2014). Med Sci Law. 2016;56(4):252-257doi: 10.1177/0025802416657762.
Swain, R., Behera, C., & Gupta, S. K. (2016). Fatal corrosive ingestion: A study from South and South-East Delhi, India (2005-2014). Medicine, science, and the law, 56(4), 252-257. https://doi.org/10.1177/0025802416657762
Swain, Rajanikanta, et al. "Fatal corrosive ingestion: A study from South and South-East Delhi, India (2005-2014)." Medicine, science, and the law vol. 56,4 (2016): 252-257. doi: https://doi.org/10.1177/0025802416657762
Swain R, Behera C, Gupta SK. Fatal corrosive ingestion: A study from South and South-East Delhi, India (2005-2014). Med Sci Law. 2016 Oct;56(4):252-257. doi: 10.1177/0025802416657762. Epub 2016 Jul 10. PMID: 27400703.
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Enhanced Carbon Dioxide Capture from Landfill Gas Using Bifunctionalized Benzimidazole-Linked Polymers.

ACS applied materials & interfaces

Islamoglu T, Behera S, Kahveci Z, Tessema TD, Jena P, El-Kaderi HM.
PMID: 27228220
ACS Appl Mater Interfaces. 2016 Jun 15;8(23):14648-55. doi: 10.1021/acsami.6b05326. Epub 2016 Jun 03.

Tuning the binding affinity of small gases and their selective uptake by porous adsorbents are vital for effective CO2 removal from gas mixtures for environmental protection and fuel upgrading. In this study, an amine-functionalized benzimidazole-linked polymer (BILP-6-NH2) was synthesized...

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Islamoglu T, Behera S, Kahveci Z, et al. Enhanced Carbon Dioxide Capture from Landfill Gas Using Bifunctionalized Benzimidazole-Linked Polymers. ACS Appl Mater Interfaces. 2016;8(23):14648-55doi: 10.1021/acsami.6b05326.
Islamoglu, T., Behera, S., Kahveci, Z., Tessema, T. D., Jena, P., & El-Kaderi, H. M. (2016). Enhanced Carbon Dioxide Capture from Landfill Gas Using Bifunctionalized Benzimidazole-Linked Polymers. ACS applied materials & interfaces, 8(23), 14648-55. https://doi.org/10.1021/acsami.6b05326
Islamoglu, Timur, et al. "Enhanced Carbon Dioxide Capture from Landfill Gas Using Bifunctionalized Benzimidazole-Linked Polymers." ACS applied materials & interfaces vol. 8,23 (2016): 14648-55. doi: https://doi.org/10.1021/acsami.6b05326
Islamoglu T, Behera S, Kahveci Z, Tessema TD, Jena P, El-Kaderi HM. Enhanced Carbon Dioxide Capture from Landfill Gas Using Bifunctionalized Benzimidazole-Linked Polymers. ACS Appl Mater Interfaces. 2016 Jun 15;8(23):14648-55. doi: 10.1021/acsami.6b05326. Epub 2016 Jun 03. PMID: 27228220.
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Showing 1 to 12 of 940 entries