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High-Throughput Minigenome System for Identifying Small-Molecule Inhibitors of Ebola Virus Replication.

ACS infectious diseases

Edwards MR, Pietzsch C, Vausselin T, Shaw ML, Bukreyev A, Basler CF.
PMID: 26284260
ACS Infect Dis. 2015 Aug 14;1(8):380-7. doi: 10.1021/acsinfecdis.5b00053. Epub 2015 Jun 24.

Ebola virus (EBOV), a member of the family Filoviridae, is a nonsegmented negative-sense RNA virus that causes severe, often lethal, disease in humans. EBOV RNA synthesis is carried out by a complex that includes several viral proteins. The function...

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Edwards MR, Pietzsch C, Vausselin T, et al. High-Throughput Minigenome System for Identifying Small-Molecule Inhibitors of Ebola Virus Replication. ACS Infect Dis. 2015;1(8):380-7doi: 10.1021/acsinfecdis.5b00053.
Edwards, M. R., Pietzsch, C., Vausselin, T., Shaw, M. L., Bukreyev, A., & Basler, C. F. (2015). High-Throughput Minigenome System for Identifying Small-Molecule Inhibitors of Ebola Virus Replication. ACS infectious diseases, 1(8), 380-7. https://doi.org/10.1021/acsinfecdis.5b00053
Edwards, Megan R, et al. "High-Throughput Minigenome System for Identifying Small-Molecule Inhibitors of Ebola Virus Replication." ACS infectious diseases vol. 1,8 (2015): 380-7. doi: https://doi.org/10.1021/acsinfecdis.5b00053
Edwards MR, Pietzsch C, Vausselin T, Shaw ML, Bukreyev A, Basler CF. High-Throughput Minigenome System for Identifying Small-Molecule Inhibitors of Ebola Virus Replication. ACS Infect Dis. 2015 Aug 14;1(8):380-7. doi: 10.1021/acsinfecdis.5b00053. Epub 2015 Jun 24. PMID: 26284260; PMCID: PMC4537067.
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Dynamic Stark broadening as the Dicke narrowing effect.

Physical review. E, Statistical, nonlinear, and soft matter physics

Calisti A, Mossé C, Ferri S, Talin B, Rosmej F, Bureyeva LA, Lisitsa VS.
PMID: 20365484
Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jan;81(1):016406. doi: 10.1103/PhysRevE.81.016406. Epub 2010 Jan 26.

A very fast method to account for charged particle dynamics effects in calculations of spectral line shape emitted by plasmas is presented. This method is based on a formulation of the frequency fluctuation model (FFM), which provides an expression...

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Calisti A, Mossé C, Ferri S, et al. Dynamic Stark broadening as the Dicke narrowing effect. Phys Rev E Stat Nonlin Soft Matter Phys. 2010;81(1):016406doi: 10.1103/PhysRevE.81.016406.
Calisti, A., Mossé, C., Ferri, S., Talin, B., Rosmej, F., Bureyeva, L. A., & Lisitsa, V. S. (2010). Dynamic Stark broadening as the Dicke narrowing effect. Physical review. E, Statistical, nonlinear, and soft matter physics, 81(1), 016406. https://doi.org/10.1103/PhysRevE.81.016406
Calisti, A, et al. "Dynamic Stark broadening as the Dicke narrowing effect." Physical review. E, Statistical, nonlinear, and soft matter physics vol. 81,1 (2010): 016406. doi: https://doi.org/10.1103/PhysRevE.81.016406
Calisti A, Mossé C, Ferri S, Talin B, Rosmej F, Bureyeva LA, Lisitsa VS. Dynamic Stark broadening as the Dicke narrowing effect. Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jan;81(1):016406. doi: 10.1103/PhysRevE.81.016406. Epub 2010 Jan 26. PMID: 20365484.
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Iterative retrieval of one-dimensional x ray wave field using a single intensity measurement.

Optics letters

Pelliccia D, Paganin DM, Sorrentino A, Bukreeva I, Cedola A, Lagomarsino S.
PMID: 22854487
Opt Lett. 2012 Jan 15;37(2):262-4. doi: 10.1364/OL.37.000262.

The problem of retrieving a complex function from the modulus of its Fourier transform has non-unique solutions in one dimension. Therefore iterative phase retrieval methods cannot in general be confidently applied to one-dimensional problems, due to the presence of...

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Pelliccia D, Paganin DM, Sorrentino A, et al. Iterative retrieval of one-dimensional x ray wave field using a single intensity measurement. Opt Lett. 2012;37(2):262-4doi: 10.1364/OL.37.000262.
Pelliccia, D., Paganin, D. M., Sorrentino, A., Bukreeva, I., Cedola, A., & Lagomarsino, S. (2012). Iterative retrieval of one-dimensional x ray wave field using a single intensity measurement. Optics letters, 37(2), 262-4. https://doi.org/10.1364/OL.37.000262
Pelliccia, D, et al. "Iterative retrieval of one-dimensional x ray wave field using a single intensity measurement." Optics letters vol. 37,2 (2012): 262-4. doi: https://doi.org/10.1364/OL.37.000262
Pelliccia D, Paganin DM, Sorrentino A, Bukreeva I, Cedola A, Lagomarsino S. Iterative retrieval of one-dimensional x ray wave field using a single intensity measurement. Opt Lett. 2012 Jan 15;37(2):262-4. doi: 10.1364/OL.37.000262. PMID: 22854487.
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Whispering gallery mirrors for the soft x-ray region: properties and applications.

Journal of X-ray science and technology

Bukreeva IN, Kozhevnikov IV, Vinogradov AV.
PMID: 21307509
J Xray Sci Technol. 1995 Jan 01;5(4):396-419. doi: 10.3233/XST-1995-5405.

Basic properties of whispering gallery mirrors in the soft x-ray region are considered. The following applications of whispering gallery optics are discussed: increasing the utilization efficiency of point source radiation, deflecting a synchrotron radiation beam to the vertical plane...

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Bukreeva IN, Kozhevnikov IV, Vinogradov AV. Whispering gallery mirrors for the soft x-ray region: properties and applications. J Xray Sci Technol. 1995;5(4):396-419doi: 10.3233/XST-1995-5405.
Bukreeva, I. N., Kozhevnikov, I. V., & Vinogradov, A. V. (1995). Whispering gallery mirrors for the soft x-ray region: properties and applications. Journal of X-ray science and technology, 5(4), 396-419. https://doi.org/10.3233/XST-1995-5405
Bukreeva, I N, et al. "Whispering gallery mirrors for the soft x-ray region: properties and applications." Journal of X-ray science and technology vol. 5,4 (1995): 396-419. doi: https://doi.org/10.3233/XST-1995-5405
Bukreeva IN, Kozhevnikov IV, Vinogradov AV. Whispering gallery mirrors for the soft x-ray region: properties and applications. J Xray Sci Technol. 1995 Jan 01;5(4):396-419. doi: 10.3233/XST-1995-5405. PMID: 21307509.
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Role of Transmembrane Protein 16F in the Incorporation of Phosphatidylserine Into Budding Ebola Virus Virions.

The Journal of infectious diseases

Younan P, Iampietro M, Santos RI, Ramanathan P, Popov VL, Bukreyev A.
PMID: 30289531
J Infect Dis. 2018 Nov 22;218:S335-S345. doi: 10.1093/infdis/jiy485.

Viral apoptotic mimicry, which is defined by exposure of phosphatidylserine (PtdSer) into the outer leaflet of budding enveloped viruses, increases viral tropism, infectivity and promotes immune evasion. Here, we report that the calcium (Ca2+)-dependent scramblase, transmembrane protein 16F (TMEM16F),...

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Younan P, Iampietro M, Santos RI, et al. Role of Transmembrane Protein 16F in the Incorporation of Phosphatidylserine Into Budding Ebola Virus Virions. J Infect Dis. 2018;218:S335-S345doi: 10.1093/infdis/jiy485.
Younan, P., Iampietro, M., Santos, R. I., Ramanathan, P., Popov, V. L., & Bukreyev, A. (2018). Role of Transmembrane Protein 16F in the Incorporation of Phosphatidylserine Into Budding Ebola Virus Virions. The Journal of infectious diseases, 218S335-S345. https://doi.org/10.1093/infdis/jiy485
Younan, Patrick, et al. "Role of Transmembrane Protein 16F in the Incorporation of Phosphatidylserine Into Budding Ebola Virus Virions." The Journal of infectious diseases vol. 218 (2018): S335-S345. doi: https://doi.org/10.1093/infdis/jiy485
Younan P, Iampietro M, Santos RI, Ramanathan P, Popov VL, Bukreyev A. Role of Transmembrane Protein 16F in the Incorporation of Phosphatidylserine Into Budding Ebola Virus Virions. J Infect Dis. 2018 Nov 22;218:S335-S345. doi: 10.1093/infdis/jiy485. PMID: 30289531; PMCID: PMC6249587.
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Excitonic Coupling and Femtosecond Relaxation of Zinc Porphyrin Oligomers Linked with Triazole Bridge: Dynamics and Modeling.

The journal of physical chemistry. A

Bukreev A, Mikhailov K, Shelaev I, Gostev F, Polevaya Y, Tyurin V, Beletskaya I, Umansky S, Nadtochenko V.
PMID: 26935579
J Phys Chem A. 2016 Mar 31;120(12):1961-70. doi: 10.1021/acs.jpca.5b11025. Epub 2016 Mar 17.

The synthesis of new zinc porphyrin oligomers linked by a triazole bridge was carried out via "click" reaction. A split in the porphyrin oligomer B-band was observed. It was considered as evidence of exciton-excitonic coupling. The relaxation of excited...

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Bukreev A, Mikhailov K, Shelaev I, et al. Excitonic Coupling and Femtosecond Relaxation of Zinc Porphyrin Oligomers Linked with Triazole Bridge: Dynamics and Modeling. J Phys Chem A. 2016;120(12):1961-70doi: 10.1021/acs.jpca.5b11025.
Bukreev, A., Mikhailov, K., Shelaev, I., Gostev, F., Polevaya, Y., Tyurin, V., Beletskaya, I., Umansky, S., & Nadtochenko, V. (2016). Excitonic Coupling and Femtosecond Relaxation of Zinc Porphyrin Oligomers Linked with Triazole Bridge: Dynamics and Modeling. The journal of physical chemistry. A, 120(12), 1961-70. https://doi.org/10.1021/acs.jpca.5b11025
Bukreev, Alexey, et al. "Excitonic Coupling and Femtosecond Relaxation of Zinc Porphyrin Oligomers Linked with Triazole Bridge: Dynamics and Modeling." The journal of physical chemistry. A vol. 120,12 (2016): 1961-70. doi: https://doi.org/10.1021/acs.jpca.5b11025
Bukreev A, Mikhailov K, Shelaev I, Gostev F, Polevaya Y, Tyurin V, Beletskaya I, Umansky S, Nadtochenko V. Excitonic Coupling and Femtosecond Relaxation of Zinc Porphyrin Oligomers Linked with Triazole Bridge: Dynamics and Modeling. J Phys Chem A. 2016 Mar 31;120(12):1961-70. doi: 10.1021/acs.jpca.5b11025. Epub 2016 Mar 17. PMID: 26935579.
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Isoniazid-Loaded Albumin Nanoparticles: Taguchi Optimization Method.

Polymers

Tazhbayev Y, Galiyeva A, Zhumagaliyeva T, Burkeyev M, Karimova B.
PMID: 34771365
Polymers (Basel). 2021 Nov 04;13(21). doi: 10.3390/polym13213808.

Tuberculosis is one of the dangerous infectious diseases, killing over a million people worldwide each year. The search for new dosage forms for the treatment of drug-resistant tuberculosis is an actual task. Biocompatible polymer nanoparticles, in particular bovine serum...

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Tazhbayev Y, Galiyeva A, Zhumagaliyeva T, et al. Isoniazid-Loaded Albumin Nanoparticles: Taguchi Optimization Method. Polymers (Basel). 2021;13(21)doi: 10.3390/polym13213808.
Tazhbayev, Y., Galiyeva, A., Zhumagaliyeva, T., Burkeyev, M., & Karimova, B. (2021). Isoniazid-Loaded Albumin Nanoparticles: Taguchi Optimization Method. Polymers, 13(21), . https://doi.org/10.3390/polym13213808
Tazhbayev, Yerkeblan, et al. "Isoniazid-Loaded Albumin Nanoparticles: Taguchi Optimization Method." Polymers vol. 13,21 (2021). doi: https://doi.org/10.3390/polym13213808
Tazhbayev Y, Galiyeva A, Zhumagaliyeva T, Burkeyev M, Karimova B. Isoniazid-Loaded Albumin Nanoparticles: Taguchi Optimization Method. Polymers (Basel). 2021 Nov 04;13(21). doi: 10.3390/polym13213808. PMID: 34771365; PMCID: PMC8588201.
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The first observation of osmotically neutral sodium accumulation in the myocardial interstitium.

Scientific reports

Artyukov I, Arutyunov G, Bobrov M, Bukreeva I, Cedola A, Dragunov D, Feshchenko R, Fratini M, Mitrokhin V, Sokolova A, Vinogradov A, Gianoncelli A.
PMID: 34764351
Sci Rep. 2021 Nov 11;11(1):22025. doi: 10.1038/s41598-021-01443-8.

The aim of this study was the detection and quantification of the Na

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Artyukov I, Arutyunov G, Bobrov M, et al. The first observation of osmotically neutral sodium accumulation in the myocardial interstitium. Sci Rep. 2021;11(1):22025doi: 10.1038/s41598-021-01443-8.
Artyukov, I., Arutyunov, G., Bobrov, M., Bukreeva, I., Cedola, A., Dragunov, D., Feshchenko, R., Fratini, M., Mitrokhin, V., Sokolova, A., Vinogradov, A., & Gianoncelli, A. (2021). The first observation of osmotically neutral sodium accumulation in the myocardial interstitium. Scientific reports, 11(1), 22025. https://doi.org/10.1038/s41598-021-01443-8
Artyukov, I, et al. "The first observation of osmotically neutral sodium accumulation in the myocardial interstitium." Scientific reports vol. 11,1 (2021): 22025. doi: https://doi.org/10.1038/s41598-021-01443-8
Artyukov I, Arutyunov G, Bobrov M, Bukreeva I, Cedola A, Dragunov D, Feshchenko R, Fratini M, Mitrokhin V, Sokolova A, Vinogradov A, Gianoncelli A. The first observation of osmotically neutral sodium accumulation in the myocardial interstitium. Sci Rep. 2021 Nov 11;11(1):22025. doi: 10.1038/s41598-021-01443-8. PMID: 34764351; PMCID: PMC8585917.
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Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions.

Frontiers in physiology

Krivonosov YS, Gulimova VI, Buzmakov AV, Zolotov DA, Cedola A, Bukreeva I, Asadchikov VE, Saveliev SV.
PMID: 34950047
Front Physiol. 2021 Dec 07;12:752893. doi: 10.3389/fphys.2021.752893. eCollection 2021.

The Mongolian gerbil displays unique physiological and anatomical features that make this species an attractive object for biological experiments in space. However, until recently, the Mongolian gerbil has remained a novel, mostly unstudied animal model in investigating bone loss...

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Krivonosov YS, Gulimova VI, Buzmakov AV, et al. Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions. Front Physiol. 2021;12:752893doi: 10.3389/fphys.2021.752893.
Krivonosov, Y. S., Gulimova, V. I., Buzmakov, A. V., Zolotov, D. A., Cedola, A., Bukreeva, I., Asadchikov, V. E., & Saveliev, S. V. (2021). Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions. Frontiers in physiology, 12752893. https://doi.org/10.3389/fphys.2021.752893
Krivonosov, Yuri S, et al. "Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions." Frontiers in physiology vol. 12 (2021): 752893. doi: https://doi.org/10.3389/fphys.2021.752893
Krivonosov YS, Gulimova VI, Buzmakov AV, Zolotov DA, Cedola A, Bukreeva I, Asadchikov VE, Saveliev SV. Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions. Front Physiol. 2021 Dec 07;12:752893. doi: 10.3389/fphys.2021.752893. eCollection 2021. PMID: 34950047; PMCID: PMC8688953.
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Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions.

Frontiers in physiology

Krivonosov YS, Gulimova VI, Buzmakov AV, Zolotov DA, Cedola A, Bukreeva I, Asadchikov VE, Saveliev SV.
PMID: 34950047
Front Physiol. 2021 Dec 07;12:752893. doi: 10.3389/fphys.2021.752893. eCollection 2021.

The Mongolian gerbil displays unique physiological and anatomical features that make this species an attractive object for biological experiments in space. However, until recently, the Mongolian gerbil has remained a novel, mostly unstudied animal model in investigating bone loss...

Cite
Krivonosov YS, Gulimova VI, Buzmakov AV, et al. Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions. Front Physiol. 2021;12:752893doi: 10.3389/fphys.2021.752893.
Krivonosov, Y. S., Gulimova, V. I., Buzmakov, A. V., Zolotov, D. A., Cedola, A., Bukreeva, I., Asadchikov, V. E., & Saveliev, S. V. (2021). Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions. Frontiers in physiology, 12752893. https://doi.org/10.3389/fphys.2021.752893
Krivonosov, Yuri S, et al. "Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions." Frontiers in physiology vol. 12 (2021): 752893. doi: https://doi.org/10.3389/fphys.2021.752893
Krivonosov YS, Gulimova VI, Buzmakov AV, Zolotov DA, Cedola A, Bukreeva I, Asadchikov VE, Saveliev SV. Micro-CT Study of Mongolian Gerbil Humeral Bone After Prolonged Spaceflight Based on a New Algorithm for Delimitation of Long-Bone Regions. Front Physiol. 2021 Dec 07;12:752893. doi: 10.3389/fphys.2021.752893. eCollection 2021. PMID: 34950047; PMCID: PMC8688953.
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X-ray Phase Contrast Tomography Serves Preclinical Investigation of Neurodegenerative Diseases.

Frontiers in neuroscience

Palermo F, Pieroni N, Maugeri L, Provinciali GB, Sanna A, Massimi L, Catalano M, Olbinado MP, Bukreeva I, Fratini M, Uccelli A, Gigli G, Kerlero de Rosbo N, Balducci C, Cedola A.
PMID: 33240038
Front Neurosci. 2020 Nov 09;14:584161. doi: 10.3389/fnins.2020.584161. eCollection 2020.

We report a qualitative study on central nervous system (CNS) damage that demonstrates the ability of X-ray phase contrast tomography (XPCT) to confirm data obtained with standard 2D methodology and permits the description of additional features that are not...

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Palermo F, Pieroni N, Maugeri L, et al. X-ray Phase Contrast Tomography Serves Preclinical Investigation of Neurodegenerative Diseases. Front Neurosci. 2020;14:584161doi: 10.3389/fnins.2020.584161.
Palermo, F., Pieroni, N., Maugeri, L., Provinciali, G. B., Sanna, A., Massimi, L., Catalano, M., Olbinado, M. P., Bukreeva, I., Fratini, M., Uccelli, A., Gigli, G., Kerlero de Rosbo, N., Balducci, C., & Cedola, A. (2020). X-ray Phase Contrast Tomography Serves Preclinical Investigation of Neurodegenerative Diseases. Frontiers in neuroscience, 14584161. https://doi.org/10.3389/fnins.2020.584161
Palermo, Francesca, et al. "X-ray Phase Contrast Tomography Serves Preclinical Investigation of Neurodegenerative Diseases." Frontiers in neuroscience vol. 14 (2020): 584161. doi: https://doi.org/10.3389/fnins.2020.584161
Palermo F, Pieroni N, Maugeri L, Provinciali GB, Sanna A, Massimi L, Catalano M, Olbinado MP, Bukreeva I, Fratini M, Uccelli A, Gigli G, Kerlero de Rosbo N, Balducci C, Cedola A. X-ray Phase Contrast Tomography Serves Preclinical Investigation of Neurodegenerative Diseases. Front Neurosci. 2020 Nov 09;14:584161. doi: 10.3389/fnins.2020.584161. eCollection 2020. PMID: 33240038; PMCID: PMC7680960.
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EPAC regulates von Willebrand factor secretion from endothelial cells in a PI3K/eNOS-dependent manner during inflammation.

bioRxiv : the preprint server for biology

Xiao J, Zhang B, Su Z, Liu Y, Shelite TR, Chang Q, Wang P, Bukreyev A, Soong L, Jin Y, Ksiazek T, Gaitas A, Rossi SL, Zhou J, Laposata M, Saito TB, Gong B.
PMID: 32908983
bioRxiv. 2020 Sep 04; doi: 10.1101/2020.09.04.282806.

Coagulopathy is associated with both inflammation and infection, including infection with the novel SARS-CoV-2 (COVID-19). Endothelial cells (ECs) fine tune hemostasis via cAMP-mediated secretion of von Willebrand factor (vWF), which promote the process of clot formation. The e xchange...

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Xiao J, Zhang B, Su Z, et al. EPAC regulates von Willebrand factor secretion from endothelial cells in a PI3K/eNOS-dependent manner during inflammation. bioRxiv. 2020;doi: 10.1101/2020.09.04.282806.
Xiao, J., Zhang, B., Su, Z., Liu, Y., Shelite, T. R., Chang, Q., Wang, P., Bukreyev, A., Soong, L., Jin, Y., Ksiazek, T., Gaitas, A., Rossi, S. L., Zhou, J., Laposata, M., Saito, T. B., & Gong, B. (2020). EPAC regulates von Willebrand factor secretion from endothelial cells in a PI3K/eNOS-dependent manner during inflammation. bioRxiv : the preprint server for biology, . https://doi.org/10.1101/2020.09.04.282806
Xiao, Jie, et al. "EPAC regulates von Willebrand factor secretion from endothelial cells in a PI3K/eNOS-dependent manner during inflammation." bioRxiv : the preprint server for biology vol. (2020). doi: https://doi.org/10.1101/2020.09.04.282806
Xiao J, Zhang B, Su Z, Liu Y, Shelite TR, Chang Q, Wang P, Bukreyev A, Soong L, Jin Y, Ksiazek T, Gaitas A, Rossi SL, Zhou J, Laposata M, Saito TB, Gong B. EPAC regulates von Willebrand factor secretion from endothelial cells in a PI3K/eNOS-dependent manner during inflammation. bioRxiv. 2020 Sep 04; doi: 10.1101/2020.09.04.282806. PMID: 32908983; PMCID: PMC7480044.
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