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Showing 1 to 12 of 308 entries
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Taking professional development from 2D to 3D: Design-based learning, 2D modeling, and 3D fabrication for authentic standards-aligned lesson plans

lesson plans

Cairns DR, Curtis R, Sierros KA.
GSID: V0zu3ly5xRQJ
DR Cairns, R Curtis, KA Sierros… - … interdisciplinary journal of …, 2018 - ncbi.nlm.nih.gov

… We believe that 3D printing can be incorporated into engineering design lesson plans that provide rich authentic contexts in which students can experience deep learning. We also believe that if these lesson plans are carefully constructed, they can...

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Cairns, D. R., Curtis, R., Sierros, K. A., & Bolyard, J. J. (2018). Taking professional development from 2D to 3D: Design-based learning, 2D modeling, and 3D fabrication for authentic standards-aligned lesson plans. The interdisciplinary journal of problem-based learning, 12(2).
Cairns, Darran R., et al. "Taking professional development from 2D to 3D: Design-based learning, 2D modeling, and 3D fabrication for authentic standards-aligned lesson plans." The interdisciplinary journal of problem-based learning 12.2 (2018).
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miRNA Enriched in Human Neuroblast Nuclei Bind the MAZ Transcription Factor and Their Precursors Contain the MAZ Consensus Motif.

Frontiers in molecular neuroscience

Goldie BJ, Fitzsimmons C, Weidenhofer J, Atkins JR, Wang DO, Cairns MJ.
PMID: 28878619
Front Mol Neurosci. 2017 Aug 21;10:259. doi: 10.3389/fnmol.2017.00259. eCollection 2017.

While the cytoplasmic function of microRNA (miRNA) as post-transcriptional regulators of mRNA has been the subject of significant research effort, their activity in the nucleus is less well characterized. Here we use a human neuronal cell model to show...

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Goldie BJ, Fitzsimmons C, Weidenhofer J, et al. miRNA Enriched in Human Neuroblast Nuclei Bind the MAZ Transcription Factor and Their Precursors Contain the MAZ Consensus Motif. Front Mol Neurosci. 2017;10:259doi: 10.3389/fnmol.2017.00259.
Goldie, B. J., Fitzsimmons, C., Weidenhofer, J., Atkins, J. R., Wang, D. O., & Cairns, M. J. (2017). miRNA Enriched in Human Neuroblast Nuclei Bind the MAZ Transcription Factor and Their Precursors Contain the MAZ Consensus Motif. Frontiers in molecular neuroscience, 10259. https://doi.org/10.3389/fnmol.2017.00259
Goldie, Belinda J, et al. "miRNA Enriched in Human Neuroblast Nuclei Bind the MAZ Transcription Factor and Their Precursors Contain the MAZ Consensus Motif." Frontiers in molecular neuroscience vol. 10 (2017): 259. doi: https://doi.org/10.3389/fnmol.2017.00259
Goldie BJ, Fitzsimmons C, Weidenhofer J, Atkins JR, Wang DO, Cairns MJ. miRNA Enriched in Human Neuroblast Nuclei Bind the MAZ Transcription Factor and Their Precursors Contain the MAZ Consensus Motif. Front Mol Neurosci. 2017 Aug 21;10:259. doi: 10.3389/fnmol.2017.00259. eCollection 2017. PMID: 28878619; PMCID: PMC5573442.
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Selective repression of SINE transcription by RNA polymerase III.

Mobile genetic elements

Varshney D, Vavrova-Anderson J, Oler AJ, Cairns BR, White RJ.
PMID: 26942044
Mob Genet Elements. 2015 Sep 23;5(6):86-91. doi: 10.1080/2159256X.2015.1096997. eCollection 2015.

A million copies of the Alu short interspersed nuclear element (SINE) are scattered throughout the human genome, providing ∼11% of our total DNA. SINEs spread by retrotransposition, using a transcript generated by RNA polymerase (pol) III from an internal...

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Varshney D, Vavrova-Anderson J, Oler AJ, et al. Selective repression of SINE transcription by RNA polymerase III. Mob Genet Elements. 2015;5(6):86-91doi: 10.1080/2159256X.2015.1096997.
Varshney, D., Vavrova-Anderson, J., Oler, A. J., Cairns, B. R., & White, R. J. (2015). Selective repression of SINE transcription by RNA polymerase III. Mobile genetic elements, 5(6), 86-91. https://doi.org/10.1080/2159256X.2015.1096997
Varshney, Dhaval, et al. "Selective repression of SINE transcription by RNA polymerase III." Mobile genetic elements vol. 5,6 (2015): 86-91. doi: https://doi.org/10.1080/2159256X.2015.1096997
Varshney D, Vavrova-Anderson J, Oler AJ, Cairns BR, White RJ. Selective repression of SINE transcription by RNA polymerase III. Mob Genet Elements. 2015 Sep 23;5(6):86-91. doi: 10.1080/2159256X.2015.1096997. eCollection 2015. PMID: 26942044; PMCID: PMC4755245.
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Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages".

Journal of clinical microbiology

Cairns MD, Preston MD, Hall CL, Gerding DN, Hawkey PM, Kato H, Kim H, Kuijper EJ, Lawley TD, Pituch H, Reid S, Kullin B, Riley TV, Solomon K, Tsai PJ, Weese JS, Stabler RA, Wren BW.
PMID: 28536162
J Clin Microbiol. 2017 Jun;55(6):1971. doi: 10.1128/JCM.00487-17.

No abstract available.

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Cairns MD, Preston MD, Hall CL, et al. Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages". J Clin Microbiol. 2017;55(6):1971doi: 10.1128/JCM.00487-17.
Cairns, M. D., Preston, M. D., Hall, C. L., Gerding, D. N., Hawkey, P. M., Kato, H., Kim, H., Kuijper, E. J., Lawley, T. D., Pituch, H., Reid, S., Kullin, B., Riley, T. V., Solomon, K., Tsai, P. J., Weese, J. S., Stabler, R. A., & Wren, B. W. (2017). Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages". Journal of clinical microbiology, 55(6), 1971. https://doi.org/10.1128/JCM.00487-17
Cairns, M D, et al. "Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages"." Journal of clinical microbiology vol. 55,6 (2017): 1971. doi: https://doi.org/10.1128/JCM.00487-17
Cairns MD, Preston MD, Hall CL, Gerding DN, Hawkey PM, Kato H, Kim H, Kuijper EJ, Lawley TD, Pituch H, Reid S, Kullin B, Riley TV, Solomon K, Tsai PJ, Weese JS, Stabler RA, Wren BW. Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages". J Clin Microbiol. 2017 Jun;55(6):1971. doi: 10.1128/JCM.00487-17. PMID: 28536162; PMCID: PMC5442559.
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Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq data.

Frontiers in genetics

Cairns J, Lynch AG, Tavaré S.
PMID: 25452765
Front Genet. 2014 Nov 14;5:399. doi: 10.3389/fgene.2014.00399. eCollection 2014.

Chromatin Immunoprecipitation followed by sequencing (ChIP-seq) is a valuable tool for epigenetic studies. Analysis of the data arising from ChIP-seq experiments often requires implicit or explicit statistical modeling of the read counts. The simple Poisson model is attractive, but...

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Cairns J, Lynch AG, Tavaré S. Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq data. Front Genet. 2014;5:399doi: 10.3389/fgene.2014.00399.
Cairns, J., Lynch, A. G., & Tavaré, S. (2014). Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq data. Frontiers in genetics, 5399. https://doi.org/10.3389/fgene.2014.00399
Cairns, Jonathan, et al. "Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq data." Frontiers in genetics vol. 5 (2014): 399. doi: https://doi.org/10.3389/fgene.2014.00399
Cairns J, Lynch AG, Tavaré S. Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq data. Front Genet. 2014 Nov 14;5:399. doi: 10.3389/fgene.2014.00399. eCollection 2014. PMID: 25452765; PMCID: PMC4231950.
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Tunable Rare Earth fcu-MOF Platform: Access to Adsorption Kinetics Driven Gas/Vapor Separations via Pore Size Contraction.

Journal of the American Chemical Society

Xue DX, Belmabkhout Y, Shekhah O, Jiang H, Adil K, Cairns AJ, Eddaoudi M.
PMID: 25825923
J Am Chem Soc. 2015 Apr 22;137(15):5034-40. doi: 10.1021/ja5131403. Epub 2015 Apr 10.

Reticular chemistry approach was successfully employed to deliberately construct new rare-earth (RE, i.e., Eu(3+), Tb(3+), and Y(3+)) fcu metal-organic frameworks (MOFs) with restricted window apertures. Controlled and selective access to the resultant contracted fcu-MOF pores permits the achievement of...

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Xue DX, Belmabkhout Y, Shekhah O, et al. Tunable Rare Earth fcu-MOF Platform: Access to Adsorption Kinetics Driven Gas/Vapor Separations via Pore Size Contraction. J Am Chem Soc. 2015;137(15):5034-40doi: 10.1021/ja5131403.
Xue, D. X., Belmabkhout, Y., Shekhah, O., Jiang, H., Adil, K., Cairns, A. J., & Eddaoudi, M. (2015). Tunable Rare Earth fcu-MOF Platform: Access to Adsorption Kinetics Driven Gas/Vapor Separations via Pore Size Contraction. Journal of the American Chemical Society, 137(15), 5034-40. https://doi.org/10.1021/ja5131403
Xue, Dong-Xu, et al. "Tunable Rare Earth fcu-MOF Platform: Access to Adsorption Kinetics Driven Gas/Vapor Separations via Pore Size Contraction." Journal of the American Chemical Society vol. 137,15 (2015): 5034-40. doi: https://doi.org/10.1021/ja5131403
Xue DX, Belmabkhout Y, Shekhah O, Jiang H, Adil K, Cairns AJ, Eddaoudi M. Tunable Rare Earth fcu-MOF Platform: Access to Adsorption Kinetics Driven Gas/Vapor Separations via Pore Size Contraction. J Am Chem Soc. 2015 Apr 22;137(15):5034-40. doi: 10.1021/ja5131403. Epub 2015 Apr 10. PMID: 25825923.
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Potential of metal-organic frameworks for separation of xenon and krypton.

Accounts of chemical research

Banerjee D, Cairns AJ, Liu J, Motkuri RK, Nune SK, Fernandez CA, Krishna R, Strachan DM, Thallapally PK.
PMID: 25479165
Acc Chem Res. 2015 Feb 17;48(2):211-9. doi: 10.1021/ar5003126. Epub 2014 Dec 05.

CONSPECTUS: The total world energy demand is predicted to rise significantly over the next few decades, primarily driven by the continuous growth of the developing world. With rapid depletion of nonrenewable traditional fossil fuels, which currently account for almost...

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Banerjee D, Cairns AJ, Liu J, et al. Potential of metal-organic frameworks for separation of xenon and krypton. Acc Chem Res. 2014;48(2):211-9doi: 10.1021/ar5003126.
Banerjee, D., Cairns, A. J., Liu, J., Motkuri, R. K., Nune, S. K., Fernandez, C. A., Krishna, R., Strachan, D. M., & Thallapally, P. K. (2015). Potential of metal-organic frameworks for separation of xenon and krypton. Accounts of chemical research, 48(2), 211-9. https://doi.org/10.1021/ar5003126
Banerjee, Debasis, et al. "Potential of metal-organic frameworks for separation of xenon and krypton." Accounts of chemical research vol. 48,2 (2015): 211-9. doi: https://doi.org/10.1021/ar5003126
Banerjee D, Cairns AJ, Liu J, Motkuri RK, Nune SK, Fernandez CA, Krishna R, Strachan DM, Thallapally PK. Potential of metal-organic frameworks for separation of xenon and krypton. Acc Chem Res. 2015 Feb 17;48(2):211-9. doi: 10.1021/ar5003126. Epub 2014 Dec 05. PMID: 25479165.
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Fructan synthesis, accumulation and polymer traits. II. Fructan pools in populations of perennial ryegrass (Lolium perenne L.) with variation for water-soluble carbohydrate and candidate genes were not correlated with biosynthetic activity and demonstrated constraints to polymer chain extension.

Frontiers in plant science

Gallagher JA, Cairns AJ, Thomas D, Timms-Taravella E, Skøt K, Charlton A, Williams P, Turner LB.
PMID: 26528321
Front Plant Sci. 2015 Oct 15;6:864. doi: 10.3389/fpls.2015.00864. eCollection 2015.

Differences have been shown between ryegrass and fescue within the Festulolium subline introgression family for fructan synthesis, metabolism, and polymer-size traits. It is well-established that there is considerable variation for water-soluble carbohydrate and fructan content within perennial ryegrass. However...

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Gallagher JA, Cairns AJ, Thomas D, et al. Fructan synthesis, accumulation and polymer traits. II. Fructan pools in populations of perennial ryegrass (Lolium perenne L.) with variation for water-soluble carbohydrate and candidate genes were not correlated with biosynthetic activity and demonstrated constraints to polymer chain extension. Front Plant Sci. 2015;6:864doi: 10.3389/fpls.2015.00864.
Gallagher, J. A., Cairns, A. J., Thomas, D., Timms-Taravella, E., Skøt, K., Charlton, A., Williams, P., & Turner, L. B. (2015). Fructan synthesis, accumulation and polymer traits. II. Fructan pools in populations of perennial ryegrass (Lolium perenne L.) with variation for water-soluble carbohydrate and candidate genes were not correlated with biosynthetic activity and demonstrated constraints to polymer chain extension. Frontiers in plant science, 6864. https://doi.org/10.3389/fpls.2015.00864
Gallagher, Joe A, et al. "Fructan synthesis, accumulation and polymer traits. II. Fructan pools in populations of perennial ryegrass (Lolium perenne L.) with variation for water-soluble carbohydrate and candidate genes were not correlated with biosynthetic activity and demonstrated constraints to polymer chain extension." Frontiers in plant science vol. 6 (2015): 864. doi: https://doi.org/10.3389/fpls.2015.00864
Gallagher JA, Cairns AJ, Thomas D, Timms-Taravella E, Skøt K, Charlton A, Williams P, Turner LB. Fructan synthesis, accumulation and polymer traits. II. Fructan pools in populations of perennial ryegrass (Lolium perenne L.) with variation for water-soluble carbohydrate and candidate genes were not correlated with biosynthetic activity and demonstrated constraints to polymer chain extension. Front Plant Sci. 2015 Oct 15;6:864. doi: 10.3389/fpls.2015.00864. eCollection 2015. PMID: 26528321; PMCID: PMC4606054.
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Synthesis of an azido-tagged low affinity ratiometric calcium sensor.

Tetrahedron

Caldwell ST, Cairns AG, Olson M, Chalmers S, Sandison M, Mullen W, McCarron JG, Hartley RC.
PMID: 26709317
Tetrahedron. 2015 Dec 23;71(51):9571-9578. doi: 10.1016/j.tet.2015.10.052.

Changes in high localised concentrations of Ca

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Caldwell ST, Cairns AG, Olson M, et al. Synthesis of an azido-tagged low affinity ratiometric calcium sensor. Tetrahedron. 2015;71(51):9571-9578doi: 10.1016/j.tet.2015.10.052.
Caldwell, S. T., Cairns, A. G., Olson, M., Chalmers, S., Sandison, M., Mullen, W., McCarron, J. G., & Hartley, R. C. (2015). Synthesis of an azido-tagged low affinity ratiometric calcium sensor. Tetrahedron, 71(51), 9571-9578. https://doi.org/10.1016/j.tet.2015.10.052
Caldwell, Stuart T, et al. "Synthesis of an azido-tagged low affinity ratiometric calcium sensor." Tetrahedron vol. 71,51 (2015): 9571-9578. doi: https://doi.org/10.1016/j.tet.2015.10.052
Caldwell ST, Cairns AG, Olson M, Chalmers S, Sandison M, Mullen W, McCarron JG, Hartley RC. Synthesis of an azido-tagged low affinity ratiometric calcium sensor. Tetrahedron. 2015 Dec 23;71(51):9571-9578. doi: 10.1016/j.tet.2015.10.052. PMID: 26709317; PMCID: PMC4660056.
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The spatial patterns of pathological brain lesions in 12 patients with corticobasal degeneration.

Pathophysiology : the official journal of the International Society for Pathophysiology

Armstrong RA, Lantos PL, Cairns NJ.
PMID: 11476973
Pathophysiology. 2001 Aug;8(1):47-53. doi: 10.1016/s0928-4680(00)00060-2.

Corticobasal degeneration (CBD) is a rare and progressive neurological disorder characterised by the presence of ballooned neurons (BN) and tau positive inclusions in neurons and glial cells. We studied the spatial patterns of the BN, tau positive neurons with...

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Armstrong RA, Lantos PL, Cairns NJ. The spatial patterns of pathological brain lesions in 12 patients with corticobasal degeneration. Pathophysiology. 2001;8(1):47-53doi: 10.1016/s0928-4680(00)00060-2.
Armstrong, R. A., Lantos, P. L., & Cairns, N. J. (2001). The spatial patterns of pathological brain lesions in 12 patients with corticobasal degeneration. Pathophysiology : the official journal of the International Society for Pathophysiology, 8(1), 47-53. https://doi.org/10.1016/s0928-4680(00)00060-2
Armstrong, R A., et al. "The spatial patterns of pathological brain lesions in 12 patients with corticobasal degeneration." Pathophysiology : the official journal of the International Society for Pathophysiology vol. 8,1 (2001): 47-53. doi: https://doi.org/10.1016/s0928-4680(00)00060-2
Armstrong RA, Lantos PL, Cairns NJ. The spatial patterns of pathological brain lesions in 12 patients with corticobasal degeneration. Pathophysiology. 2001 Aug;8(1):47-53. doi: 10.1016/s0928-4680(00)00060-2. PMID: 11476973.
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Should health screening be private? .

BMJ (Clinical research ed.)

Cairns J.
PMID: 10346797
BMJ. 1999 May 29;318(7196):1494A. doi: 10.1136/bmj.318.7196.1494a.

No abstract available.

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Cairns J. Should health screening be private? . BMJ. 1999;318(7196):1494Adoi: 10.1136/bmj.318.7196.1494a.
Cairns, J. (1999). Should health screening be private? . BMJ (Clinical research ed.), 318(7196), 1494A. https://doi.org/10.1136/bmj.318.7196.1494a
Cairns. "Should health screening be private? ." BMJ (Clinical research ed.) vol. 318,7196 (1999): 1494A. doi: https://doi.org/10.1136/bmj.318.7196.1494a
Cairns J. Should health screening be private? . BMJ. 1999 May 29;318(7196):1494A. doi: 10.1136/bmj.318.7196.1494a. PMID: 10346797; PMCID: PMC1115865.
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Rhythm control and rate control did not differ for CV mortality in atrial fibrillation and congestive heart failure.

ACP journal club

Cairns J.
PMID: 18937386
ACP J Club. 2008 Nov-Dec;149(4):8.

No abstract available.

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Cairns J. Rhythm control and rate control did not differ for CV mortality in atrial fibrillation and congestive heart failure. ACP J Club. 2008;149(4):8
Cairns, J. (2008). Rhythm control and rate control did not differ for CV mortality in atrial fibrillation and congestive heart failure. ACP journal club, 149(4), 8.
Cairns, John. "Rhythm control and rate control did not differ for CV mortality in atrial fibrillation and congestive heart failure." ACP journal club vol. 149,4 (2008): 8.
Cairns J. Rhythm control and rate control did not differ for CV mortality in atrial fibrillation and congestive heart failure. ACP J Club. 2008 Nov-Dec;149(4):8. PMID: 18937386.
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Showing 1 to 12 of 308 entries