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The Inclusive Engineering Consortium Stakeholders' Workshop

Centers of Research Excellence in Science and Technology (CREST) and HBCU Research Infrastructure for Science and Engineering (RISE) AND Program Evaluation

Chouikha MF, Connor KA, Scott CJ.
GSID: md4W4PCIfEEJ
JC Kelly, MF Chouikha, CJ Scott, KA Connor… - 2020 ASEE Virtual …, 2020 - peer.asee.org

Dr. John C. Kelly, Jr. is an associate professor in the Department of Electrical and Computer Engineering at North Carolina A&T State University. He received his Ph. D. in Electrical Engineering from the University of Delaware. Dr. Kelly's research...

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Kelly, J. C., Chouikha, M. F., Scott, C. J., Connor, K. A., Geddis, D., Ndoye, M., ... & Yaqub, R. (2020, June). The Inclusive Engineering Consortium Stakeholders' Workshop. In 2020 ASEE Virtual Annual Conference Content Access.
Kelly, John C., et al. "The Inclusive Engineering Consortium Stakeholders' Workshop." 2020 ASEE Virtual Annual Conference Content Access. 2020.
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Microarray analysis of gene expression in soybean roots susceptible to the soybean cyst nematode two days post invasion.

Journal of nematology

Khan R, Alkharouf N, Beard H, Macdonald M, Chouikha I, Meyer S, Grefenstette J, Knap H, Matthews B.
PMID: 19262812
J Nematol. 2004 Sep;36(3):241-8.

Soybean root cells undergo dramatic morphological and biochemical changes during the establishment of a feeding site in a compatible interaction with the soybean cyst nematode (SCN). We constructed a cDNA microarray with approximately 1,300 cDNA inserts targeted to identify...

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Khan R, Alkharouf N, Beard H, et al. Microarray analysis of gene expression in soybean roots susceptible to the soybean cyst nematode two days post invasion. J Nematol. 2004;36(3):241-8
Khan, R., Alkharouf, N., Beard, H., Macdonald, M., Chouikha, I., Meyer, S., Grefenstette, J., Knap, H., & Matthews, B. (2004). Microarray analysis of gene expression in soybean roots susceptible to the soybean cyst nematode two days post invasion. Journal of nematology, 36(3), 241-8.
Khan, R, et al. "Microarray analysis of gene expression in soybean roots susceptible to the soybean cyst nematode two days post invasion." Journal of nematology vol. 36,3 (2004): 241-8.
Khan R, Alkharouf N, Beard H, Macdonald M, Chouikha I, Meyer S, Grefenstette J, Knap H, Matthews B. Microarray analysis of gene expression in soybean roots susceptible to the soybean cyst nematode two days post invasion. J Nematol. 2004 Sep;36(3):241-8. PMID: 19262812; PMCID: PMC2620781.
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Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction.

Viruses

Ayouni K, Chouikha A, Khamessi O, Touzi H, Hammemi W, Triki H.
PMID: 34204862
Viruses. 2021 Jun 03;13(6). doi: 10.3390/v13061056.

Similar to several other countries in the world, the epidemiology of hepatitis A virus changed from high to intermediate endemicity level in Tunisia, which led to the occurrence of outbreaks. This study aimed to determine the genetic and antigenic...

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Ayouni K, Chouikha A, Khamessi O, et al. Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction. Viruses. 2021;13(6)doi: 10.3390/v13061056.
Ayouni, K., Chouikha, A., Khamessi, O., Touzi, H., Hammemi, W., & Triki, H. (2021). Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction. Viruses, 13(6), . https://doi.org/10.3390/v13061056
Ayouni, Kaouther, et al. "Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction." Viruses vol. 13,6 (2021). doi: https://doi.org/10.3390/v13061056
Ayouni K, Chouikha A, Khamessi O, Touzi H, Hammemi W, Triki H. Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction. Viruses. 2021 Jun 03;13(6). doi: 10.3390/v13061056. PMID: 34204862; PMCID: PMC8227776.
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Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia.

Microbiology spectrum

Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H.
PMID: 34756072
Microbiol Spectr. 2021 Dec 22;9(3):e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10.

Recent efforts have reported numerous variants that influence severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral characteristics, including pathogenicity, transmission rate, and detectability by molecular tests. Whole-genome sequencing based on next-generation sequencing technologies is the method of choice to...

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Fares W, Ghedira K, Gdoura M, et al. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021;9(3):e0063921doi: 10.1128/Spectrum.00639-21.
Fares, W., Ghedira, K., Gdoura, M., Chouikha, A., Haddad-Boubaker, S., Khedhiri, M., Ayouni, K., Lamari, A., Touzi, H., Hammemi, W., Medeb, Z., Sadraoui, A., Hogga, N., Ben Alaya, N., & Triki, H. (2021). Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiology spectrum, 9(3), e0063921. https://doi.org/10.1128/Spectrum.00639-21
Fares, Wasfi, et al. "Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia." Microbiology spectrum vol. 9,3 (2021): e0063921. doi: https://doi.org/10.1128/Spectrum.00639-21
Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021 Dec 22;9(3):e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10. PMID: 34756072; PMCID: PMC8579926.
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Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia.

Microbiology spectrum

Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H.
PMID: 34756072
Microbiol Spectr. 2021 Nov 10;e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10.

Recent efforts have reported numerous variants that influence severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral characteristics, including pathogenicity, transmission rate, and detectability by molecular tests. Whole-genome sequencing based on next-generation sequencing technologies is the method of choice to...

Cite
Fares W, Ghedira K, Gdoura M, et al. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021;e0063921doi: 10.1128/Spectrum.00639-21.
Fares, W., Ghedira, K., Gdoura, M., Chouikha, A., Haddad-Boubaker, S., Khedhiri, M., Ayouni, K., Lamari, A., Touzi, H., Hammemi, W., Medeb, Z., Sadraoui, A., Hogga, N., Ben Alaya, N., & Triki, H. (2021). Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiology spectrum, e0063921. https://doi.org/10.1128/Spectrum.00639-21
Fares, Wasfi, et al. "Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia." Microbiology spectrum vol. (2021): e0063921. doi: https://doi.org/10.1128/Spectrum.00639-21
Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021 Nov 10;e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10. PMID: 34756072; PMCID: PMC8579926.
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Distribution of HCV Genotypes Among People Who Inject Drugs in Tunisia: New Evidence for Scaling Up Prevention and Treatment Toward National Elimination Goal.

Frontiers in microbiology

Chouikha A, Ghrabi A, Ghodbane A, Hammemi W, Khedhiri M, Sadraoui A, Touzi H, Hassine HB, Maatoug S, Bensaoud C, Abdelhak S, Bouarrouj S, Gdoura M, Chaouachi H, Triki H.
PMID: 34385988
Front Microbiol. 2021 Jul 27;12:697859. doi: 10.3389/fmicb.2021.697859. eCollection 2021.

Little is known about the distribution of hepatitis C virus (HCV) genotypes among people who inject drugs (PWID) in North African countries, including Tunisia. This study aims to describe HCV genotypes circulating among Tunisian PWID. A cross-sectional study was...

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Chouikha A, Ghrabi A, Ghodbane A, et al. Distribution of HCV Genotypes Among People Who Inject Drugs in Tunisia: New Evidence for Scaling Up Prevention and Treatment Toward National Elimination Goal. Front Microbiol. 2021;12:697859doi: 10.3389/fmicb.2021.697859.
Chouikha, A., Ghrabi, A., Ghodbane, A., Hammemi, W., Khedhiri, M., Sadraoui, A., Touzi, H., Hassine, H. B., Maatoug, S., Bensaoud, C., Abdelhak, S., Bouarrouj, S., Gdoura, M., Chaouachi, H., & Triki, H. (2021). Distribution of HCV Genotypes Among People Who Inject Drugs in Tunisia: New Evidence for Scaling Up Prevention and Treatment Toward National Elimination Goal. Frontiers in microbiology, 12697859. https://doi.org/10.3389/fmicb.2021.697859
Chouikha, Anissa, et al. "Distribution of HCV Genotypes Among People Who Inject Drugs in Tunisia: New Evidence for Scaling Up Prevention and Treatment Toward National Elimination Goal." Frontiers in microbiology vol. 12 (2021): 697859. doi: https://doi.org/10.3389/fmicb.2021.697859
Chouikha A, Ghrabi A, Ghodbane A, Hammemi W, Khedhiri M, Sadraoui A, Touzi H, Hassine HB, Maatoug S, Bensaoud C, Abdelhak S, Bouarrouj S, Gdoura M, Chaouachi H, Triki H. Distribution of HCV Genotypes Among People Who Inject Drugs in Tunisia: New Evidence for Scaling Up Prevention and Treatment Toward National Elimination Goal. Front Microbiol. 2021 Jul 27;12:697859. doi: 10.3389/fmicb.2021.697859. eCollection 2021. PMID: 34385988; PMCID: PMC8353188.
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Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia.

Microbiology spectrum

Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H.
PMID: 34756072
Microbiol Spectr. 2021 Dec 22;9(3):e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10.

Recent efforts have reported numerous variants that influence severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral characteristics, including pathogenicity, transmission rate, and detectability by molecular tests. Whole-genome sequencing based on next-generation sequencing technologies is the method of choice to...

Cite
Fares W, Ghedira K, Gdoura M, et al. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021;9(3):e0063921doi: 10.1128/Spectrum.00639-21.
Fares, W., Ghedira, K., Gdoura, M., Chouikha, A., Haddad-Boubaker, S., Khedhiri, M., Ayouni, K., Lamari, A., Touzi, H., Hammemi, W., Medeb, Z., Sadraoui, A., Hogga, N., Ben Alaya, N., & Triki, H. (2021). Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiology spectrum, 9(3), e0063921. https://doi.org/10.1128/Spectrum.00639-21
Fares, Wasfi, et al. "Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia." Microbiology spectrum vol. 9,3 (2021): e0063921. doi: https://doi.org/10.1128/Spectrum.00639-21
Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021 Dec 22;9(3):e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10. PMID: 34756072; PMCID: PMC8579926.
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Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia.

Microbiology spectrum

Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H.
PMID: 34756072
Microbiol Spectr. 2021 Dec 22;9(3):e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10.

Recent efforts have reported numerous variants that influence severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral characteristics, including pathogenicity, transmission rate, and detectability by molecular tests. Whole-genome sequencing based on next-generation sequencing technologies is the method of choice to...

Cite
Fares W, Ghedira K, Gdoura M, et al. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021;9(3):e0063921doi: 10.1128/Spectrum.00639-21.
Fares, W., Ghedira, K., Gdoura, M., Chouikha, A., Haddad-Boubaker, S., Khedhiri, M., Ayouni, K., Lamari, A., Touzi, H., Hammemi, W., Medeb, Z., Sadraoui, A., Hogga, N., Ben Alaya, N., & Triki, H. (2021). Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiology spectrum, 9(3), e0063921. https://doi.org/10.1128/Spectrum.00639-21
Fares, Wasfi, et al. "Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia." Microbiology spectrum vol. 9,3 (2021): e0063921. doi: https://doi.org/10.1128/Spectrum.00639-21
Fares W, Ghedira K, Gdoura M, Chouikha A, Haddad-Boubaker S, Khedhiri M, Ayouni K, Lamari A, Touzi H, Hammemi W, Medeb Z, Sadraoui A, Hogga N, Ben Alaya N, Triki H. Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia. Microbiol Spectr. 2021 Dec 22;9(3):e0063921. doi: 10.1128/Spectrum.00639-21. Epub 2021 Nov 10. PMID: 34756072; PMCID: PMC8579926.
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Differential Gene Expression Patterns of .

mSystems

Chouikha I, Sturdevant DE, Jarrett C, Sun YC, Hinnebusch BJ.
PMID: 30801031
mSystems. 2019 Feb 19;4(1). doi: 10.1128/mSystems.00217-18. eCollection 2019.

Yersinia pestis, the etiologic agent of plague, emerged as a fleaborne pathogen only within the last 6,000 years. Just five simple genetic changes in the Yersinia pseudotuberculosis progenitor, which served to eliminate toxicity to fleas and to enhance survival...

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Chouikha I, Sturdevant DE, Jarrett C, et al. Differential Gene Expression Patterns of . mSystems. 2019;4(1)doi: 10.1128/mSystems.00217-18.
Chouikha, I., Sturdevant, D. E., Jarrett, C., Sun, Y. C., & Hinnebusch, B. J. (2019). Differential Gene Expression Patterns of . mSystems, 4(1), . https://doi.org/10.1128/mSystems.00217-18
Chouikha, Iman, et al. "Differential Gene Expression Patterns of ." mSystems vol. 4,1 (2019). doi: https://doi.org/10.1128/mSystems.00217-18
Chouikha I, Sturdevant DE, Jarrett C, Sun YC, Hinnebusch BJ. Differential Gene Expression Patterns of . mSystems. 2019 Feb 19;4(1). doi: 10.1128/mSystems.00217-18. eCollection 2019. PMID: 30801031; PMCID: PMC6381227.
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Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction.

Viruses

Ayouni K, Chouikha A, Khamessi O, Touzi H, Hammemi W, Triki H.
PMID: 34204862
Viruses. 2021 Jun 03;13(6). doi: 10.3390/v13061056.

Similar to several other countries in the world, the epidemiology of hepatitis A virus changed from high to intermediate endemicity level in Tunisia, which led to the occurrence of outbreaks. This study aimed to determine the genetic and antigenic...

Cite
Ayouni K, Chouikha A, Khamessi O, et al. Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction. Viruses. 2021;13(6)doi: 10.3390/v13061056.
Ayouni, K., Chouikha, A., Khamessi, O., Touzi, H., Hammemi, W., & Triki, H. (2021). Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction. Viruses, 13(6), . https://doi.org/10.3390/v13061056
Ayouni, Kaouther, et al. "Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction." Viruses vol. 13,6 (2021). doi: https://doi.org/10.3390/v13061056
Ayouni K, Chouikha A, Khamessi O, Touzi H, Hammemi W, Triki H. Evidence of Circulation of Several HAV Genetic Variants and Emergence of Potential Antigenic Variants in an Endemo-Epidemic Country before Vaccine Introduction. Viruses. 2021 Jun 03;13(6). doi: 10.3390/v13061056. PMID: 34204862; PMCID: PMC8227776.
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