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Science gateways: the long road to the birth of an institute

Computer and Information Science and Engineering Minority-Serving Institutions Research Expansion Program AND Program Evaluation

Dahan M, Gesing S, Wilkins-Diehr N.
GSID: AmgasvOE63oJ
S Gesing, N Wilkins-Diehr, M Dahan, K Lawrence… - 2017 - aisel.aisnet.org

Nowadays, research in various disciplines is enhanced via computational methods, cutting-edge technologies and diverse resources including computational infrastructures and instruments. Such infrastructures are often complex and researchers need means to conduct their research in an efficient way without getting...

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Gesing, S., Wilkins-Diehr, N., Dahan, M., Lawrence, K., Zentner, M., Pierce, M., ... & Marru, S. (2017). Science gateways: the long road to the birth of an institute.
Gesing, Sandra, et al. "Science gateways: the long road to the birth of an institute." (2017).
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XSEDE: accelerating scientific discovery

science campus

Towns J, Cockerill T, Dahan M, Foster I.
GSID: 3d1mYLPJOUkJ
J Towns, T Cockerill, M Dahan, I Foster… - … in science & …, 2014 - ieeexplore.ieee.org

… and with campus-based resources, serving as the foundation for a national e-science infrastructure ecosystem. XSEDE’s e-… Campus Champions (see below) and spread ECSS expertise to campuses, we initiated the Campus Champion Fellows program, which pairs a Campus …

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Towns, J., Cockerill, T., Dahan, M., Foster, I., Gaither, K., Grimshaw, A., ... & Wilkins-Diehr, N. (2014). XSEDE: accelerating scientific discovery. Computing in science & engineering, 16(5), 62-74.
Towns, John, et al. "XSEDE: accelerating scientific discovery." Computing in science & engineering 16.5 (2014): 62-74.
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Science gateways: Sustainability via on-campus teams

science campus

Gesing S, Dahan M, Pierce ME.
GSID: 7HBQndPenlEJ
S Gesing, K Lawrence, M Dahan, ME Pierce… - Future Generation …, 2019 - Elsevier

… campus groups and of sharing resources across a campus. We provide four successful cases, describe the services of the Science Gateways Community Institute (SGCI) to support the process in building such groups, and recommend strategies for using free...

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Gesing, S., Lawrence, K., Dahan, M., Pierce, M. E., Wilkins-Diehr, N., & Zentner, M. (2019). Science gateways: Sustainability via on-campus teams. Future Generation Computer Systems, 94, 97-102.
Gesing, Sandra, et al. "Science gateways: Sustainability via on-campus teams." Future Generation Computer Systems 94 (2019): 97-102.
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Substantive‐level theory of highly regarded secondary biology teachers' science teaching orientations

Science education

Dana TM, Meis P.
GSID: jccC9LU3ejUJ
P Meis Friedrichsen, TM Dana - Journal of Research in Science …, 2005 - Wiley Online Library

Science teaching orientations, defined as teachers' knowledge and beliefs about the purposes and goals for teaching science, have been identified as a critical component within …

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Meis Friedrichsen, P., & Dana, T. M. (2005). Substantive‐level theory of highly regarded secondary biology teachers' science teaching orientations. Journal of Research in Science Teaching: The Official Journal of the National Association for Research in Science Teaching, 42(2), 218-244.
Meis Friedrichsen, Patricia, and Thomas M. Dana. "Substantive‐level theory of highly regarded secondary biology teachers' science teaching orientations." Journal of Research in Science Teaching: The Official Journal of the National Association for Research in Science Teaching 42.2 (2005): 218-244.
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SU-D-213CD-06: Workflow and Safety Systems of a Linac-MR Sim-Brachytherapy MRgRT™ Facility.

Medical physics

Winter J, Carlone M, Stanescu T, Breen S, Foxcroft S, Guyot B, Dahan M, Dahdal R, Jaffray D.
PMID: 28517391
Med Phys. 2012 Jun;39(6):3618-3619. doi: 10.1118/1.4734691.

PURPOSE: To develop the operational workflow and safety systems of a magnetic resonance-guided radiotherapy system (MRgRT™), which comprises an MR scanner on rails that travels between a linac vault, MR simulation room and brachytherapy suite.METHODS: To develop a safe...

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Winter J, Carlone M, Stanescu T, et al. SU-D-213CD-06: Workflow and Safety Systems of a Linac-MR Sim-Brachytherapy MRgRT™ Facility. Med Phys. 2012;39(6):3618-3619doi: 10.1118/1.4734691.
Winter, J., Carlone, M., Stanescu, T., Breen, S., Foxcroft, S., Guyot, B., Dahan, M., Dahdal, R., & Jaffray, D. (2012). SU-D-213CD-06: Workflow and Safety Systems of a Linac-MR Sim-Brachytherapy MRgRT™ Facility. Medical physics, 39(6), 3618-3619. https://doi.org/10.1118/1.4734691
Winter, J, et al. "SU-D-213CD-06: Workflow and Safety Systems of a Linac-MR Sim-Brachytherapy MRgRT™ Facility." Medical physics vol. 39,6 (2012): 3618-3619. doi: https://doi.org/10.1118/1.4734691
Winter J, Carlone M, Stanescu T, Breen S, Foxcroft S, Guyot B, Dahan M, Dahdal R, Jaffray D. SU-D-213CD-06: Workflow and Safety Systems of a Linac-MR Sim-Brachytherapy MRgRT™ Facility. Med Phys. 2012 Jun;39(6):3618-3619. doi: 10.1118/1.4734691. PMID: 28517391.
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Automated Atom-By-Atom Three-Dimensional (3D) Reconstruction of Field Ion Microscopy Data.

Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada

Dagan M, Gault B, Smith GDW, Bagot PAJ, Moody MP.
PMID: 28318483
Microsc Microanal. 2017 Apr;23(2):255-268. doi: 10.1017/S1431927617000277. Epub 2017 Mar 20.

An automated procedure has been developed for the reconstruction of field ion microscopy (FIM) data that maintains its atomistic nature. FIM characterizes individual atoms on the specimen's surface, evolving subject to field evaporation, in a series of two-dimensional (2D)...

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Dagan M, Gault B, Smith GDW, et al. Automated Atom-By-Atom Three-Dimensional (3D) Reconstruction of Field Ion Microscopy Data. Microsc Microanal. 2017;23(2):255-268doi: 10.1017/S1431927617000277.
Dagan, M., Gault, B., Smith, G. D. W., Bagot, P. A. J., & Moody, M. P. (2017). Automated Atom-By-Atom Three-Dimensional (3D) Reconstruction of Field Ion Microscopy Data. Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, 23(2), 255-268. https://doi.org/10.1017/S1431927617000277
Dagan, Michal, et al. "Automated Atom-By-Atom Three-Dimensional (3D) Reconstruction of Field Ion Microscopy Data." Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada vol. 23,2 (2017): 255-268. doi: https://doi.org/10.1017/S1431927617000277
Dagan M, Gault B, Smith GDW, Bagot PAJ, Moody MP. Automated Atom-By-Atom Three-Dimensional (3D) Reconstruction of Field Ion Microscopy Data. Microsc Microanal. 2017 Apr;23(2):255-268. doi: 10.1017/S1431927617000277. Epub 2017 Mar 20. PMID: 28318483.
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Surface-Enhanced Resonance Raman Scattering of Rhodamine 6G in Dispersions and on Films of Confeito-Like Au Nanoparticles.

Sensors (Basel, Switzerland)

Ujihara M, Dang NM, Imae T.
PMID: 29112163
Sensors (Basel). 2017 Nov 07;17(11). doi: 10.3390/s17112563.

Surface-enhanced resonance Raman scattering (SERRS) of rhodamine 6G was measured on confeito-like Au nanoparticles (CAuNPs). The large CAuNPs (100 nm in diameter) in aqueous dispersion systems showed stronger enhancing effect (analytical enhancement factor: over 10⁵) of SERRS than the...

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Ujihara M, Dang NM, Imae T. Surface-Enhanced Resonance Raman Scattering of Rhodamine 6G in Dispersions and on Films of Confeito-Like Au Nanoparticles. Sensors (Basel). 2017;17(11)doi: 10.3390/s17112563.
Ujihara, M., Dang, N. M., & Imae, T. (2017). Surface-Enhanced Resonance Raman Scattering of Rhodamine 6G in Dispersions and on Films of Confeito-Like Au Nanoparticles. Sensors (Basel, Switzerland), 17(11), . https://doi.org/10.3390/s17112563
Ujihara, Masaki, et al. "Surface-Enhanced Resonance Raman Scattering of Rhodamine 6G in Dispersions and on Films of Confeito-Like Au Nanoparticles." Sensors (Basel, Switzerland) vol. 17,11 (2017). doi: https://doi.org/10.3390/s17112563
Ujihara M, Dang NM, Imae T. Surface-Enhanced Resonance Raman Scattering of Rhodamine 6G in Dispersions and on Films of Confeito-Like Au Nanoparticles. Sensors (Basel). 2017 Nov 07;17(11). doi: 10.3390/s17112563. PMID: 29112163; PMCID: PMC5712894.
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True Atomic-Scale Imaging in Three Dimensions: A Review of the Rebirth of Field-Ion Microscopy.

Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada

Vurpillot F, Danoix F, Gilbert M, Koelling S, Dagan M, Seidman DN.
PMID: 28337951
Microsc Microanal. 2017 Apr;23(2):210-220. doi: 10.1017/S1431927617000198. Epub 2017 Mar 24.

This article reviews recent advances utilizing field-ion microscopy (FIM) to extract atomic-scale three-dimensional images of materials. This capability is not new, as the first atomic-scale reconstructions of features utilizing FIM were demonstrated decades ago. The rise of atom probe...

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Vurpillot F, Danoix F, Gilbert M, et al. True Atomic-Scale Imaging in Three Dimensions: A Review of the Rebirth of Field-Ion Microscopy. Microsc Microanal. 2017;23(2):210-220doi: 10.1017/S1431927617000198.
Vurpillot, F., Danoix, F., Gilbert, M., Koelling, S., Dagan, M., & Seidman, D. N. (2017). True Atomic-Scale Imaging in Three Dimensions: A Review of the Rebirth of Field-Ion Microscopy. Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, 23(2), 210-220. https://doi.org/10.1017/S1431927617000198
Vurpillot, Francois, et al. "True Atomic-Scale Imaging in Three Dimensions: A Review of the Rebirth of Field-Ion Microscopy." Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada vol. 23,2 (2017): 210-220. doi: https://doi.org/10.1017/S1431927617000198
Vurpillot F, Danoix F, Gilbert M, Koelling S, Dagan M, Seidman DN. True Atomic-Scale Imaging in Three Dimensions: A Review of the Rebirth of Field-Ion Microscopy. Microsc Microanal. 2017 Apr;23(2):210-220. doi: 10.1017/S1431927617000198. Epub 2017 Mar 24. PMID: 28337951.
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The association between perceived maternal and paternal psychopathology and depression and anxiety symptoms in adolescent girls.

Frontiers in psychology

Rasing SP, Creemers DH, Janssens JM, Scholte RH.
PMID: 26257664
Front Psychol. 2015 Jul 21;6:963. doi: 10.3389/fpsyg.2015.00963. eCollection 2015.

Exposure to parental depression and anxiety is known to heighten the risk of internalizing symptoms and disorders in children and adolescents. Ample research has focused on the influence of maternal depression and anxiety, but the contribution of psychopathology in...

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Rasing SP, Creemers DH, Janssens JM, et al. The association between perceived maternal and paternal psychopathology and depression and anxiety symptoms in adolescent girls. Front Psychol. 2015;6:963doi: 10.3389/fpsyg.2015.00963.
Rasing, S. P., Creemers, D. H., Janssens, J. M., & Scholte, R. H. (2015). The association between perceived maternal and paternal psychopathology and depression and anxiety symptoms in adolescent girls. Frontiers in psychology, 6963. https://doi.org/10.3389/fpsyg.2015.00963
Rasing, Sanne P A, et al. "The association between perceived maternal and paternal psychopathology and depression and anxiety symptoms in adolescent girls." Frontiers in psychology vol. 6 (2015): 963. doi: https://doi.org/10.3389/fpsyg.2015.00963
Rasing SP, Creemers DH, Janssens JM, Scholte RH. The association between perceived maternal and paternal psychopathology and depression and anxiety symptoms in adolescent girls. Front Psychol. 2015 Jul 21;6:963. doi: 10.3389/fpsyg.2015.00963. eCollection 2015. PMID: 26257664; PMCID: PMC4508489.
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Spontaneous bilateral adrenal hemorrhage following cholecystectomy.

Hepatobiliary surgery and nutrition

Dahan M, Lim C, Salloum C, Azoulay D.
PMID: 27275469
Hepatobiliary Surg Nutr. 2016 Jun;5(3):263-4. doi: 10.21037/hbsn.2015.12.09.

Postoperative bilateral adrenal hemorrhage is a rare but potentially life-threatening complication. This diagnosis is often missed because the symptoms and laboratory results are usually nonspecific. We report a case of bilateral adrenal hemorrhage associated with acute primary adrenal insufficiency...

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Dahan M, Lim C, Salloum C, et al. Spontaneous bilateral adrenal hemorrhage following cholecystectomy. Hepatobiliary Surg Nutr. 2016;5(3):263-4doi: 10.21037/hbsn.2015.12.09.
Dahan, M., Lim, C., Salloum, C., & Azoulay, D. (2016). Spontaneous bilateral adrenal hemorrhage following cholecystectomy. Hepatobiliary surgery and nutrition, 5(3), 263-4. https://doi.org/10.21037/hbsn.2015.12.09
Dahan, Meryl, et al. "Spontaneous bilateral adrenal hemorrhage following cholecystectomy." Hepatobiliary surgery and nutrition vol. 5,3 (2016): 263-4. doi: https://doi.org/10.21037/hbsn.2015.12.09
Dahan M, Lim C, Salloum C, Azoulay D. Spontaneous bilateral adrenal hemorrhage following cholecystectomy. Hepatobiliary Surg Nutr. 2016 Jun;5(3):263-4. doi: 10.21037/hbsn.2015.12.09. PMID: 27275469; PMCID: PMC4876245.
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Molar Refractivity and Connectivity Index Correlations for Henry's Law Virial Coefficients of Odorous Sulfur Compounds on Carbon and for Gas-Chromatographic Retention Indices.

Journal of colloid and interface science

Rybolt TR, Hooper DN, Stensby JB, Thomas HE, Baker ML.
PMID: 11161504
J Colloid Interface Sci. 2001 Feb 01;234(1):168-177. doi: 10.1006/jcis.2000.7202.

Gas-solid chromatography was used to obtain values of the second gas-solid virial coefficient, B(2s), in the temperature range from 392 to 511 K for 10 volatile, malodorous organic sulfur compounds; ethanethiol, 1-propanethiol, methyl sulfide, 2-propanethiol, 1-methyl-1-propanethiol, 2-methyl-1-propanethiol, 2-methyl-2-propanethiol, ethyl...

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Rybolt TR, Hooper DN, Stensby JB, et al. Molar Refractivity and Connectivity Index Correlations for Henry's Law Virial Coefficients of Odorous Sulfur Compounds on Carbon and for Gas-Chromatographic Retention Indices. J Colloid Interface Sci. 2001;234(1):168-177doi: 10.1006/jcis.2000.7202.
Rybolt, T. R., Hooper, D. N., Stensby, J. B., Thomas, H. E., & Baker, M. L. (2001). Molar Refractivity and Connectivity Index Correlations for Henry's Law Virial Coefficients of Odorous Sulfur Compounds on Carbon and for Gas-Chromatographic Retention Indices. Journal of colloid and interface science, 234(1), 168-177. https://doi.org/10.1006/jcis.2000.7202
Rybolt, Thomas R., et al. "Molar Refractivity and Connectivity Index Correlations for Henry's Law Virial Coefficients of Odorous Sulfur Compounds on Carbon and for Gas-Chromatographic Retention Indices." Journal of colloid and interface science vol. 234,1 (2001): 168-177. doi: https://doi.org/10.1006/jcis.2000.7202
Rybolt TR, Hooper DN, Stensby JB, Thomas HE, Baker ML. Molar Refractivity and Connectivity Index Correlations for Henry's Law Virial Coefficients of Odorous Sulfur Compounds on Carbon and for Gas-Chromatographic Retention Indices. J Colloid Interface Sci. 2001 Feb 01;234(1):168-177. doi: 10.1006/jcis.2000.7202. PMID: 11161504.
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A molecular dynamics study of chirality transfer: The impact of a chiral solute on an achiral solvent.

The Journal of chemical physics

Wang S, Cann NM.
PMID: 18698914
J Chem Phys. 2008 Aug 07;129(5):054507. doi: 10.1063/1.2958911.

A solvation shell may adapt to the presence of a chiral solute by becoming chiral. The extent of this chirality transfer and its dependence on the solute and solvent characteristics are explored in this article. Molecular dynamics simulations of...

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Wang S, Cann NM. A molecular dynamics study of chirality transfer: The impact of a chiral solute on an achiral solvent. J Chem Phys. 2008;129(5):054507doi: 10.1063/1.2958911.
Wang, S., & Cann, N. M. (2008). A molecular dynamics study of chirality transfer: The impact of a chiral solute on an achiral solvent. The Journal of chemical physics, 129(5), 054507. https://doi.org/10.1063/1.2958911
Wang, Shihao, and Cann, N M. "A molecular dynamics study of chirality transfer: The impact of a chiral solute on an achiral solvent." The Journal of chemical physics vol. 129,5 (2008): 054507. doi: https://doi.org/10.1063/1.2958911
Wang S, Cann NM. A molecular dynamics study of chirality transfer: The impact of a chiral solute on an achiral solvent. J Chem Phys. 2008 Aug 07;129(5):054507. doi: 10.1063/1.2958911. PMID: 18698914.
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Showing 1 to 12 of 280 entries